RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 ZNF577Q9BSK1 485 aa14.11□□□□□ -0.15
CAPRIN1-213ENST00000533562 RNF26Q9BY78 433 aaPredicted RBP14.11□□□□□ -0.15
CAPRIN1-213ENST00000533562 FAM49AQ9H0Q0 323 aaPredicted RBP14.11□□□□□ -0.15
CAPRIN1-213ENST00000533562 TBC1D22BQ9NU19 505 aa14.11□□□□□ -0.15
CAPRIN1-213ENST00000533562 CDY2AQ9Y6F7 541 aa14.11□□□□□ -0.15
CAPRIN1-213ENST00000533562 NID2Q14112 1375 aa14.1□□□□□ -0.15
CAPRIN1-213ENST00000533562 IGKV6D-21A0A0A0MT36 114 aa14.1□□□□□ -0.15
CAPRIN1-213ENST00000533562 DDX39AO00148 427 aaKnown RBP14.1□□□□□ -0.15
CAPRIN1-213ENST00000533562 ENPP3O14638 875 aa14.1□□□□□ -0.15
CAPRIN1-213ENST00000533562 HBP1O60381 514 aa14.1□□□□□ -0.15
CAPRIN1-213ENST00000533562 NEFLP07196 543 aa14.1□□□□□ -0.15
CAPRIN1-213ENST00000533562 IFNAR1P17181 557 aa14.1□□□□□ -0.15
CAPRIN1-213ENST00000533562 PDIA3P30101 505 aaKnown RBP14.1□□□□□ -0.15
CAPRIN1-213ENST00000533562 SETQ01105 290 aaPredicted RBP14.1□□□□□ -0.15
CAPRIN1-213ENST00000533562 NTRK3Q16288 839 aa14.1□□□□□ -0.15
CAPRIN1-213ENST00000533562 PTPROQ16827 1216 aa14.1□□□□□ -0.15
CAPRIN1-213ENST00000533562 EPC2Q52LR7 807 aa14.1□□□□□ -0.15
CAPRIN1-213ENST00000533562 MIS18BP1Q6P0N0 1132 aa14.1□□□□□ -0.15
CAPRIN1-213ENST00000533562 MTHFD1LQ6UB35 978 aa14.1□□□□□ -0.15
CAPRIN1-213ENST00000533562 ABHD15Q6UXT9 468 aa14.1□□□□□ -0.15
CAPRIN1-213ENST00000533562 CCDC148Q8NFR7 591 aa14.1□□□□□ -0.15
CAPRIN1-213ENST00000533562 CRYGNQ8WXF5 182 aa14.1□□□□□ -0.15
CAPRIN1-213ENST00000533562 SLC26A6Q9BXS9 759 aa14.1□□□□□ -0.15
CAPRIN1-213ENST00000533562 FTHL17Q9BXU8 183 aa14.1□□□□□ -0.15
CAPRIN1-213ENST00000533562 ZSWIM6Q9HCJ5 1215 aa14.1□□□□□ -0.15
CAPRIN1-213ENST00000533562 TCEAL9Q9UHQ7 104 aa14.1□□□□□ -0.15
CAPRIN1-213ENST00000533562 CYP46A1Q9Y6A2 500 aa14.1□□□□□ -0.15
CAPRIN1-213ENST00000533562 IGLV3-22A0A075B6J6 115 aa14.09□□□□□ -0.15
CAPRIN1-213ENST00000533562 SMIM35A0A1B0GVV1 85 aa14.09□□□□□ -0.15
CAPRIN1-213ENST00000533562 RBAK-RBAKDNI3L0D1 243 aa14.09□□□□□ -0.15
CAPRIN1-213ENST00000533562 DHX15O43143 795 aaKnown RBP14.09□□□□□ -0.15
CAPRIN1-213ENST00000533562 CCNE2O96020 404 aa14.09□□□□□ -0.15
CAPRIN1-213ENST00000533562 KLRC1P26715 233 aa14.09□□□□□ -0.15
CAPRIN1-213ENST00000533562 CCT2P78371 535 aaKnown RBP14.09□□□□□ -0.15
CAPRIN1-213ENST00000533562 ZNF746Q6NUN9 644 aaPredicted RBP14.09□□□□□ -0.15
CAPRIN1-213ENST00000533562 SWSAP1Q6NVH7 229 aa14.09□□□□□ -0.15
CAPRIN1-213ENST00000533562 PDXDC2PQ6P474 469 aa14.09□□□□□ -0.15
CAPRIN1-213ENST00000533562 FAM43BQ6ZT52 329 aaPredicted RBP14.09□□□□□ -0.15
CAPRIN1-213ENST00000533562 TMEM192Q8IY95 271 aa14.09□□□□□ -0.15
CAPRIN1-213ENST00000533562 TRIM22Q8IYM9 498 aa14.09□□□□□ -0.15
CAPRIN1-213ENST00000533562 FIBCD1Q8N539 461 aa14.09□□□□□ -0.15
CAPRIN1-213ENST00000533562 ATP8B4Q8TF62 1192 aa14.09□□□□□ -0.15
CAPRIN1-213ENST00000533562 CELF4Q9BZC1 486 aaKnown RBP14.09□□□□□ -0.15
CAPRIN1-213ENST00000533562 ZNF302Q9NR11 478 aa14.09□□□□□ -0.15
CAPRIN1-213ENST00000533562 SH3GLB2Q9NR46 395 aa14.09□□□□□ -0.15
CAPRIN1-213ENST00000533562 TRPV2Q9Y5S1 764 aa14.09□□□□□ -0.15
CAPRIN1-213ENST00000533562 H3BNC9 293 aa14.08□□□□□ -0.16
CAPRIN1-213ENST00000533562 CPLX1O14810 134 aa14.08□□□□□ -0.16
CAPRIN1-213ENST00000533562 CENPBP07199 599 aaPredicted RBP14.08□□□□□ -0.16
CAPRIN1-213ENST00000533562 CD52P31358 61 aa14.08□□□□□ -0.16
CAPRIN1-213ENST00000533562 CIITAP33076 1130 aa14.08□□□□□ -0.16
CAPRIN1-213ENST00000533562 KCNQ1P51787 676 aa14.08□□□□□ -0.16
CAPRIN1-213ENST00000533562 KRT76Q01546 638 aa14.08□□□□□ -0.16
CAPRIN1-213ENST00000533562 TMEM62Q0P6H9 643 aa14.08□□□□□ -0.16
CAPRIN1-213ENST00000533562 GPM6BQ13491 265 aa14.08□□□□□ -0.16
CAPRIN1-213ENST00000533562 PRR16Q569H4 304 aa14.08□□□□□ -0.16
CAPRIN1-213ENST00000533562 ZNF484Q5JVG2 852 aa14.08□□□□□ -0.16
CAPRIN1-213ENST00000533562 CKAP2LQ8IYA6 745 aa14.08□□□□□ -0.16
CAPRIN1-213ENST00000533562 SMAP1Q8IYB5 467 aaPredicted RBP14.08□□□□□ -0.16
CAPRIN1-213ENST00000533562 TRAPPC12Q8WVT3 735 aa14.08□□□□□ -0.16
CAPRIN1-213ENST00000533562 ZBTB10Q96DT7 871 aa14.08□□□□□ -0.16
CAPRIN1-213ENST00000533562 MRPL38Q96DV4 380 aaKnown RBP14.08□□□□□ -0.16
CAPRIN1-213ENST00000533562 TM6SF1Q9BZW5 370 aa14.08□□□□□ -0.16
CAPRIN1-213ENST00000533562 RWDD3Q9Y3V2 267 aa14.08□□□□□ -0.16
CAPRIN1-213ENST00000533562 PCDHA10Q9Y5I2 948 aa14.08□□□□□ -0.16
CAPRIN1-213ENST00000533562 PPFIA3O75145 1194 aa14.07□□□□□ -0.16
CAPRIN1-213ENST00000533562 RB1P06400 928 aa14.07□□□□□ -0.16
CAPRIN1-213ENST00000533562 PSAPP07602 524 aa14.07□□□□□ -0.16
CAPRIN1-213ENST00000533562 USP11P51784 963 aa14.07□□□□□ -0.16
CAPRIN1-213ENST00000533562 NLRP5P59047 1200 aa14.07□□□□□ -0.16
CAPRIN1-213ENST00000533562 SSRP1Q08945 709 aaKnown RBP14.07□□□□□ -0.16
CAPRIN1-213ENST00000533562 PAK2Q13177 524 aa14.07□□□□□ -0.16
CAPRIN1-213ENST00000533562 CPLX2Q6PUV4 134 aaKnown RBP14.07□□□□□ -0.16
CAPRIN1-213ENST00000533562 CCDC60Q8IWA6 550 aaPredicted RBP14.07□□□□□ -0.16
CAPRIN1-213ENST00000533562 BBXQ8WY36 941 aaPredicted RBP14.07□□□□□ -0.16
CAPRIN1-213ENST00000533562 ZNF274Q96GC6 653 aaPredicted RBP14.07□□□□□ -0.16
CAPRIN1-213ENST00000533562 C22orf23Q9BZE7 217 aa14.07□□□□□ -0.16
CAPRIN1-213ENST00000533562 AGO3Q9H9G7 860 aaKnown RBP14.07□□□□□ -0.16
CAPRIN1-213ENST00000533562 NCOA5Q9HCD5 579 aaKnown RBP14.07□□□□□ -0.16
CAPRIN1-213ENST00000533562 VPS54Q9P1Q0 977 aa14.07□□□□□ -0.16
CAPRIN1-213ENST00000533562 PADI3Q9ULW8 664 aa14.07□□□□□ -0.16
CAPRIN1-213ENST00000533562 SAMM50Q9Y512 469 aa14.07□□□□□ -0.16
CAPRIN1-213ENST00000533562 MAFBQ9Y5Q3 323 aaPredicted RBP14.07□□□□□ -0.16
CAPRIN1-213ENST00000533562 KDM3AQ9Y4C1 1321 aa14.07□□□□□ -0.16
CAPRIN1-213ENST00000533562 TCF20Q9UGU0 1960 aaKnown RBP14.07□□□□□ -0.16
CAPRIN1-213ENST00000533562 COL1A2P08123 1366 aa14.07□□□□□ -0.16
CAPRIN1-213ENST00000533562 SIP14410 1827 aa14.06□□□□□ -0.16
CAPRIN1-213ENST00000533562 ADAMTS3O15072 1205 aa14.06□□□□□ -0.16
CAPRIN1-213ENST00000533562 STAG3L1P0CL83 205 aa14.06□□□□□ -0.16
CAPRIN1-213ENST00000533562 BMPR1AP36894 532 aa14.06□□□□□ -0.16
CAPRIN1-213ENST00000533562 TOB2Q14106 344 aaPredicted RBP14.06□□□□□ -0.16
CAPRIN1-213ENST00000533562 BTG3Q14201 252 aaPredicted RBP14.06□□□□□ -0.16
CAPRIN1-213ENST00000533562 ODR4Q5SWX8 454 aa14.06□□□□□ -0.16
CAPRIN1-213ENST00000533562 RASGRP4Q8TDF6 673 aa14.06□□□□□ -0.16
CAPRIN1-213ENST00000533562 UIMC1Q96RL1 719 aa14.06□□□□□ -0.16
CAPRIN1-213ENST00000533562 CEP131Q9UPN4 1083 aa14.06□□□□□ -0.16
CAPRIN1-213ENST00000533562 TTC3P53804 2025 aa14.06□□□□□ -0.16
CAPRIN1-213ENST00000533562 IGSF9BQ9UPX0 1349 aa14.06□□□□□ -0.16
CAPRIN1-213ENST00000533562 MYO7AQ13402 2215 aa14.06□□□□□ -0.16
CAPRIN1-213ENST00000533562 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms