RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 PDE6CP51160 858 aa13.49□□□□□ -0.25
RAD50-209ENST00000533482 EPHB4P54760 987 aa13.49□□□□□ -0.25
RAD50-209ENST00000533482 BRDTQ58F21 947 aaPredicted RBP13.49□□□□□ -0.25
RAD50-209ENST00000533482 ANKRD7Q92527 254 aa13.49□□□□□ -0.25
RAD50-209ENST00000533482 GAS8O95995 478 aa13.49□□□□□ -0.25
RAD50-209ENST00000533482 GAP43P17677 238 aa13.49□□□□□ -0.25
RAD50-209ENST00000533482 ADCY8P40145 1251 aa13.49□□□□□ -0.25
RAD50-209ENST00000533482 PKN1Q16512 942 aa13.49□□□□□ -0.25
RAD50-209ENST00000533482 CDAN1Q8IWY9 1227 aa13.49□□□□□ -0.25
RAD50-209ENST00000533482 REXO1L1PQ8IX06 675 aa13.49□□□□□ -0.25
RAD50-209ENST00000533482 ZNF653Q96CK0 615 aa13.49□□□□□ -0.25
RAD50-209ENST00000533482 JMJD4Q9H9V9 463 aa13.49□□□□□ -0.25
RAD50-209ENST00000533482 KCNQ5Q9NR82 932 aa13.49□□□□□ -0.25
RAD50-209ENST00000533482 NXF1Q9UBU9 619 aaKnown RBP13.49□□□□□ -0.25
RAD50-209ENST00000533482 TRIM49P0CI25 452 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 TRIM49CP0CI26 452 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 KRT15P19012 456 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 TFAMQ00059 246 aaKnown RBP13.48□□□□□ -0.25
RAD50-209ENST00000533482 TMED8Q6PL24 325 aaPredicted RBP13.48□□□□□ -0.25
RAD50-209ENST00000533482 VGLL2Q8N8G2 317 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 CAPN11Q9UMQ6 739 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 CTIFO43310 598 aaKnown RBP13.48□□□□□ -0.25
RAD50-209ENST00000533482 LMNB1P20700 586 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 SLCO1A2P46721 670 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 GCLMP48507 274 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 MXI1P50539 228 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 MTMR3Q13615 1198 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 KCNB1Q14721 858 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 SLC30A10Q6XR72 485 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 NLRP4Q96MN2 994 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 NRBP2Q9NSY0 501 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 ANAPC4Q9UJX5 808 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 MORC2Q9Y6X9 1032 aaPredicted RBP13.48□□□□□ -0.25
RAD50-209ENST00000533482 FAM205AQ6ZU69 1335 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 SLC16A4O15374 487 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 DPEP1P16444 411 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 CD58P19256 250 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 YARSP54577 528 aaKnown RBP13.48□□□□□ -0.25
RAD50-209ENST00000533482 MAP3K9P80192 1104 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 MTMR2Q13614 643 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 ZNF394Q53GI3 561 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 PADI6Q6TGC4 694 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 MICALL2Q8IY33 904 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 PRPF38AQ8NAV1 312 aaKnown RBP13.48□□□□□ -0.25
RAD50-209ENST00000533482 NT5C1BQ96P26 610 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 DNAJC17Q9NVM6 304 aaKnown RBP13.48□□□□□ -0.25
RAD50-209ENST00000533482 CAMTA1Q9Y6Y1 1673 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 GOLGA8KD6RF30 607 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 MYCP01106 439 aaPredicted RBP13.48□□□□□ -0.25
RAD50-209ENST00000533482 ECE1P42892 770 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 DHX9Q08211 1270 aaKnown RBP13.48□□□□□ -0.25
RAD50-209ENST00000533482 PPP2R5DQ14738 602 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 ZNF746Q6NUN9 644 aaPredicted RBP13.48□□□□□ -0.25
RAD50-209ENST00000533482 SCYL2Q6P3W7 929 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 OTUD5Q96G74 571 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 DNAJC12Q9UKB3 198 aa13.48□□□□□ -0.25
RAD50-209ENST00000533482 RHOBTB3O94955 611 aa13.47□□□□□ -0.25
RAD50-209ENST00000533482 PIK3CAP42336 1068 aa13.47□□□□□ -0.25
RAD50-209ENST00000533482 MXRA7P84157 204 aa13.47□□□□□ -0.25
RAD50-209ENST00000533482 PPP1R21Q6ZMI0 780 aa13.47□□□□□ -0.25
RAD50-209ENST00000533482 NOA1Q8NC60 698 aaKnown RBP13.47□□□□□ -0.25
RAD50-209ENST00000533482 ACER1Q8TDN7 264 aa13.47□□□□□ -0.25
RAD50-209ENST00000533482 ACCSQ96QU6 501 aa13.47□□□□□ -0.25
RAD50-209ENST00000533482 FERMT1Q9BQL6 677 aa13.47□□□□□ -0.25
RAD50-209ENST00000533482 NBPF3Q9H094 633 aa13.47□□□□□ -0.25
RAD50-209ENST00000533482 MAD2L2Q9UI95 211 aa13.47□□□□□ -0.25
RAD50-209ENST00000533482 PRR12Q9ULL5 1215 aa13.47□□□□□ -0.25
RAD50-209ENST00000533482 ZNRF3Q9ULT6 936 aa13.47□□□□□ -0.25
RAD50-209ENST00000533482 AKT3Q9Y243 479 aa13.47□□□□□ -0.25
RAD50-209ENST00000533482 DAAM1Q9Y4D1 1078 aa13.47□□□□□ -0.25
RAD50-209ENST00000533482 SALL1Q9NSC2 1324 aa13.47□□□□□ -0.25
RAD50-209ENST00000533482 MYO1FO00160 1098 aa13.47□□□□□ -0.25
RAD50-209ENST00000533482 NMT1P30419 496 aaKnown RBP13.47□□□□□ -0.25
RAD50-209ENST00000533482 CCDC6Q16204 474 aa13.47□□□□□ -0.25
RAD50-209ENST00000533482 VPS37BQ9H9H4 285 aa13.47□□□□□ -0.25
RAD50-209ENST00000533482 STIM2Q9P246 746 aa13.47□□□□□ -0.25
RAD50-209ENST00000533482 CNOT7Q9UIV1 285 aaKnown RBP13.47□□□□□ -0.25
RAD50-209ENST00000533482 CAPN7Q9Y6W3 813 aa13.47□□□□□ -0.25
RAD50-209ENST00000533482 TRIP13Q15645 432 aaPredicted RBP13.47□□□□□ -0.25
RAD50-209ENST00000533482 LRRN4CLQ8ND94 238 aa13.47□□□□□ -0.25
RAD50-209ENST00000533482 OSBPL9Q96SU4 736 aa13.47□□□□□ -0.25
RAD50-209ENST00000533482 A0A1W2PQC6 194 aa13.46□□□□□ -0.25
RAD50-209ENST00000533482 FGGP02679 453 aa13.46□□□□□ -0.25
RAD50-209ENST00000533482 ACTN1P12814 892 aa13.46□□□□□ -0.25
RAD50-209ENST00000533482 NNTQ13423 1086 aa13.46□□□□□ -0.25
RAD50-209ENST00000533482 KNOP1Q1ED39 458 aaKnown RBP13.46□□□□□ -0.25
RAD50-209ENST00000533482 EXOC4Q96A65 974 aa13.46□□□□□ -0.25
RAD50-209ENST00000533482 EIF2AK1Q9BQI3 630 aaKnown RBP13.46□□□□□ -0.25
RAD50-209ENST00000533482 LXNQ9BS40 222 aa13.46□□□□□ -0.25
RAD50-209ENST00000533482 CEP72Q9P209 647 aa13.46□□□□□ -0.25
RAD50-209ENST00000533482 NSFP46459 744 aaKnown RBP13.46□□□□□ -0.25
RAD50-209ENST00000533482 ZNF211Q13398 564 aaPredicted RBP13.46□□□□□ -0.25
RAD50-209ENST00000533482 BSPRYQ5W0U4 402 aa13.46□□□□□ -0.25
RAD50-209ENST00000533482 THNSL1Q8IYQ7 743 aa13.46□□□□□ -0.25
RAD50-209ENST00000533482 RIN2Q8WYP3 895 aaPredicted RBP13.46□□□□□ -0.25
RAD50-209ENST00000533482 RNF34Q969K3 372 aa13.46□□□□□ -0.25
RAD50-209ENST00000533482 RTFDC1Q9BY42 306 aaPredicted RBP13.46□□□□□ -0.25
RAD50-209ENST00000533482 RNF181Q9P0P0 153 aa13.46□□□□□ -0.25
RAD50-209ENST00000533482 TTLL3Q9Y4R7 772 aa13.46□□□□□ -0.25
RAD50-209ENST00000533482 A0A087X0B3 334 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms