RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 CCDC12Q8WUD4 166 aaPredicted RBP12.87□□□□□ -0.35
CLCF1-202ENST00000533438 ZBTB10Q96DT7 871 aa12.87□□□□□ -0.35
CLCF1-202ENST00000533438 NECAB3Q96P71 396 aaPredicted RBP12.87□□□□□ -0.35
CLCF1-202ENST00000533438 C17orf80Q9BSJ5 609 aa12.87□□□□□ -0.35
CLCF1-202ENST00000533438 C6orf50Q9HD87 102 aa12.87□□□□□ -0.35
CLCF1-202ENST00000533438 MTUS1Q9ULD2 1270 aa12.87□□□□□ -0.35
CLCF1-202ENST00000533438 CDY2AQ9Y6F7 541 aa12.87□□□□□ -0.35
CLCF1-202ENST00000533438 TTC3P53804 2025 aa12.87□□□□□ -0.35
CLCF1-202ENST00000533438 EVPLQ92817 2033 aa12.87□□□□□ -0.35
CLCF1-202ENST00000533438 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.86□□□□□ -0.35
CLCF1-202ENST00000533438 POTEB3A0JP26 581 aa12.86□□□□□ -0.35
CLCF1-202ENST00000533438 GNA11P29992 359 aa12.86□□□□□ -0.35
CLCF1-202ENST00000533438 ZNF76P36508 570 aa12.86□□□□□ -0.35
CLCF1-202ENST00000533438 SLC26A2P50443 739 aa12.86□□□□□ -0.35
CLCF1-202ENST00000533438 MRPS6P82932 125 aaKnown RBP12.86□□□□□ -0.35
CLCF1-202ENST00000533438 SKIV2LQ15477 1246 aaKnown RBP12.86□□□□□ -0.35
CLCF1-202ENST00000533438 POTEBQ6S5H4 581 aa12.86□□□□□ -0.35
CLCF1-202ENST00000533438 RUFY3Q7L099 469 aa12.86□□□□□ -0.35
CLCF1-202ENST00000533438 CCDC60Q8IWA6 550 aaPredicted RBP12.86□□□□□ -0.35
CLCF1-202ENST00000533438 REXO1Q8N1G1 1221 aaKnown RBP12.86□□□□□ -0.35
CLCF1-202ENST00000533438 TNPO1Q92973 898 aaKnown RBP12.86□□□□□ -0.35
CLCF1-202ENST00000533438 HLA-CQ95604 372 aa12.86□□□□□ -0.35
CLCF1-202ENST00000533438 EPHX3Q9H6B9 360 aa12.86□□□□□ -0.35
CLCF1-202ENST00000533438 RC3H2Q9HBD1 1191 aaKnown RBP12.86□□□□□ -0.35
CLCF1-202ENST00000533438 ZSWIM6Q9HCJ5 1215 aa12.86□□□□□ -0.35
CLCF1-202ENST00000533438 TRPC6Q9Y210 931 aa12.86□□□□□ -0.35
CLCF1-202ENST00000533438 PCDHA2Q9Y5H9 948 aa12.86□□□□□ -0.35
CLCF1-202ENST00000533438 KIAA1671Q9BY89 1806 aa12.85□□□□□ -0.35
CLCF1-202ENST00000533438 SMIM35A0A1B0GVV1 85 aa12.85□□□□□ -0.35
CLCF1-202ENST00000533438 PI4K2BG5E9Z4 385 aa12.85□□□□□ -0.35
CLCF1-202ENST00000533438 DDX39AO00148 427 aaKnown RBP12.85□□□□□ -0.35
CLCF1-202ENST00000533438 IPO5O00410 1097 aaKnown RBP12.85□□□□□ -0.35
CLCF1-202ENST00000533438 PPFIA3O75145 1194 aa12.85□□□□□ -0.35
CLCF1-202ENST00000533438 UPP2O95045 317 aa12.85□□□□□ -0.35
CLCF1-202ENST00000533438 CIITAP33076 1130 aa12.85□□□□□ -0.35
CLCF1-202ENST00000533438 CCT2P78371 535 aaKnown RBP12.85□□□□□ -0.35
CLCF1-202ENST00000533438 SETQ01105 290 aaPredicted RBP12.85□□□□□ -0.35
CLCF1-202ENST00000533438 TSHZ1Q6ZSZ6 1077 aa12.85□□□□□ -0.35
CLCF1-202ENST00000533438 FBXO22Q8NEZ5 403 aa12.85□□□□□ -0.35
CLCF1-202ENST00000533438 TRAPPC12Q8WVT3 735 aa12.85□□□□□ -0.35
CLCF1-202ENST00000533438 SAMD11Q96NU1 681 aa12.85□□□□□ -0.35
CLCF1-202ENST00000533438 YME1L1Q96TA2 773 aa12.85□□□□□ -0.35
CLCF1-202ENST00000533438 AGO3Q9H9G7 860 aaKnown RBP12.85□□□□□ -0.35
CLCF1-202ENST00000533438 NCOA5Q9HCD5 579 aaKnown RBP12.85□□□□□ -0.35
CLCF1-202ENST00000533438 C11orf16Q9NQ32 467 aa12.85□□□□□ -0.35
CLCF1-202ENST00000533438 SQORQ9Y6N5 450 aa12.85□□□□□ -0.35
CLCF1-202ENST00000533438 ENPP3O14638 875 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 EDIL3O43854 480 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 HBP1O60381 514 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 LINC00271P0C7V0 271 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 ATP4AP20648 1035 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 AKAP17AQ02040 695 aaKnown RBP12.84□□□□□ -0.35
CLCF1-202ENST00000533438 EPC2Q52LR7 807 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 IER5Q5VY09 327 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 FAM160B1Q5W0V3 765 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 MTHFD1LQ6UB35 978 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 CCDC148Q8NFR7 591 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 BICD2Q8TD16 824 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 RASGRP4Q8TDF6 673 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 ATP8B4Q8TF62 1192 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 LINC01599Q8WXQ3 324 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 LENG9Q96B70 501 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 ZNF577Q9BSK1 485 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 SLC26A6Q9BXS9 759 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 TM6SF1Q9BZW5 370 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 FAM49AQ9H0Q0 323 aaPredicted RBP12.84□□□□□ -0.35
CLCF1-202ENST00000533438 UPF2Q9HAU5 1272 aaKnown RBP12.84□□□□□ -0.35
CLCF1-202ENST00000533438 ZNF302Q9NR11 478 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 SH3GLB2Q9NR46 395 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 TBC1D22BQ9NU19 505 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 VPS54Q9P1Q0 977 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 TRPV2Q9Y5S1 764 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 IGSF9BQ9UPX0 1349 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 KDM3AQ9Y4C1 1321 aa12.84□□□□□ -0.35
CLCF1-202ENST00000533438 COL1A2P08123 1366 aa12.83□□□□□ -0.36
CLCF1-202ENST00000533438 ZBTB42B2RXF5 422 aa12.83□□□□□ -0.36
CLCF1-202ENST00000533438 H3BNC9 293 aa12.83□□□□□ -0.36
CLCF1-202ENST00000533438 BACH1O14867 736 aa12.83□□□□□ -0.36
CLCF1-202ENST00000533438 KLRC1P26715 233 aa12.83□□□□□ -0.36
CLCF1-202ENST00000533438 CD52P31358 61 aa12.83□□□□□ -0.36
CLCF1-202ENST00000533438 TMEM31Q5JXX7 168 aa12.83□□□□□ -0.36
CLCF1-202ENST00000533438 ZNF746Q6NUN9 644 aaPredicted RBP12.83□□□□□ -0.36
CLCF1-202ENST00000533438 SWSAP1Q6NVH7 229 aa12.83□□□□□ -0.36
CLCF1-202ENST00000533438 MIS18BP1Q6P0N0 1132 aa12.83□□□□□ -0.36
CLCF1-202ENST00000533438 CRIPAKQ8N1N5 446 aa12.83□□□□□ -0.36
CLCF1-202ENST00000533438 NME8Q8N427 588 aa12.83□□□□□ -0.36
CLCF1-202ENST00000533438 ZNF689Q96CS4 500 aaPredicted RBP12.83□□□□□ -0.36
CLCF1-202ENST00000533438 ZNF274Q96GC6 653 aaPredicted RBP12.83□□□□□ -0.36
CLCF1-202ENST00000533438 CELF4Q9BZC1 486 aaKnown RBP12.83□□□□□ -0.36
CLCF1-202ENST00000533438 MAFBQ9Y5Q3 323 aaPredicted RBP12.83□□□□□ -0.36
CLCF1-202ENST00000533438 CYP46A1Q9Y6A2 500 aa12.83□□□□□ -0.36
CLCF1-202ENST00000533438 BRWD1Q9NSI6 2320 aa12.82□□□□□ -0.36
CLCF1-202ENST00000533438 C5orf67F2Z3F1 127 aa12.82□□□□□ -0.36
CLCF1-202ENST00000533438 M0QZ92 97 aa12.82□□□□□ -0.36
CLCF1-202ENST00000533438 KRT76Q01546 638 aa12.82□□□□□ -0.36
CLCF1-202ENST00000533438 TMEM62Q0P6H9 643 aa12.82□□□□□ -0.36
CLCF1-202ENST00000533438 PRR16Q569H4 304 aa12.82□□□□□ -0.36
CLCF1-202ENST00000533438 ZNF484Q5JVG2 852 aa12.82□□□□□ -0.36
CLCF1-202ENST00000533438 PDXDC2PQ6P474 469 aa12.82□□□□□ -0.36
CLCF1-202ENST00000533438 RTN4RL1Q86UN2 441 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms