RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 CDC23Q9UJX2 597 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 FBXO10Q9UK96 956 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 MAN1B1Q9UKM7 699 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 FAM50BQ9Y247 325 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 PDS5AQ29RF7 1337 aaKnown RBP5.95□□□□□ -1.46
CKAP5-212ENST00000533413 WDR19Q8NEZ3 1342 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 SCN9AQ15858 1988 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 COL1A1P02452 1464 aaPredicted RBP5.95□□□□□ -1.46
CKAP5-212ENST00000533413 FAM237AA0A1B0GTK4 181 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 CTAGE9A4FU28 777 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 PDE8BO95263 885 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 TUBBP07437 444 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 CCDC159P0C7I6 412 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 SLC5A1P13866 664 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 GCFC2P16383 781 aaKnown RBP5.95□□□□□ -1.46
CKAP5-212ENST00000533413 VCAM1P19320 739 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 RXRAP19793 462 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 HNRNPH1P31943 449 aaKnown RBP5.95□□□□□ -1.46
CKAP5-212ENST00000533413 PDE4BQ07343 736 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 PTPAQ15257 358 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 FAM133BQ5BKY9 247 aaKnown RBP5.95□□□□□ -1.46
CKAP5-212ENST00000533413 METTL24Q5JXM2 366 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 ZNF569Q5MCW4 686 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 DDX42Q86XP3 938 aaKnown RBP eCLIP5.95□□□□□ -1.46
CKAP5-212ENST00000533413 TMEM139Q8IV31 216 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 GLYCTKQ8IVS8 523 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 BHMTQ93088 406 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 PHKBQ93100 1093 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 ZNF594Q96JF6 807 aaPredicted RBP5.95□□□□□ -1.46
CKAP5-212ENST00000533413 PANX2Q96RD6 677 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 PDE11AQ9HCR9 933 aa5.95□□□□□ -1.46
CKAP5-212ENST00000533413 ZNF541Q9H0D2 1346 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 TRPM7Q96QT4 1865 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 USP17L3A6NCW0 530 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 USP17L4A6NCW7 530 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 RASSF10A6NK89 507 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 FANCGO15287 622 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 POLR2DO15514 142 aaKnown RBP5.94□□□□□ -1.46
CKAP5-212ENST00000533413 GPAA1O43292 621 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 KRT38O76015 456 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 TOMM70O94826 608 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 FGFR1OPO95684 399 aaKnown RBP5.94□□□□□ -1.46
CKAP5-212ENST00000533413 IL1R1P14778 569 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 ANTXR2P58335 489 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 POLR2FP61218 127 aaKnown RBP5.94□□□□□ -1.46
CKAP5-212ENST00000533413 COX10Q12887 443 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 MYBPC3Q14896 1274 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 CAVIN4Q5BKX8 364 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 AKNAD1Q5T1N1 836 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 STRIP1Q5VSL9 837 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 USP17L1Q7RTZ2 530 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 DAAM2Q86T65 1068 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 TMEM151BQ8IW70 566 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 TRMT44Q8IYL2 757 aaKnown RBP5.94□□□□□ -1.46
CKAP5-212ENST00000533413 IGSF22Q8N9C0 903 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 SMC1BQ8NDV3 1235 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 CCDC26Q8TAB7 109 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 ZNF483Q8TF39 744 aaPredicted RBP5.94□□□□□ -1.46
CKAP5-212ENST00000533413 LPIN2Q92539 896 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 RELTQ969Z4 430 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 KIFC2Q96AC6 838 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 ZMAT2Q96NC0 199 aaKnown RBP5.94□□□□□ -1.46
CKAP5-212ENST00000533413 TMUB1Q9BVT8 246 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 SLC26A6Q9BXS9 759 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 CRISPLD2Q9H0B8 497 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 EMILIN3Q9NT22 766 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 INTS13Q9NVM9 706 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 VTI1BQ9UEU0 232 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 TRPC6Q9Y210 931 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 CTAGE15A4D2H0 777 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 FOXN3O00409 490 aaPredicted RBP5.94□□□□□ -1.46
CKAP5-212ENST00000533413 CTAGE8P0CG41 777 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 ELF1P32519 619 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 USP8P40818 1118 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 TMEM259Q4ZIN3 620 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 TMEM67Q5HYA8 995 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 CAPN12Q6ZSI9 719 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 NEK10Q6ZWH5 1172 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 CATSPER4Q7RTX7 472 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 CTAGE6Q86UF2 777 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 KIAA0825Q8IV33 1275 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 FOXP4Q8IVH2 680 aaPredicted RBP5.94□□□□□ -1.46
CKAP5-212ENST00000533413 CTAGE4Q8IX94 777 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 TRIM22Q8IYM9 498 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 VGLL2Q8N8G2 317 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 HNRNPLLQ8WVV9 542 aaKnown RBP5.94□□□□□ -1.46
CKAP5-212ENST00000533413 FAM167BQ9BTA0 163 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 ZNF408Q9H9D4 720 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 ADARB2Q9NS39 739 aaKnown RBP5.94□□□□□ -1.46
CKAP5-212ENST00000533413 SERTAD1Q9UHV2 236 aa5.94□□□□□ -1.46
CKAP5-212ENST00000533413 FOXN1O15353 648 aa5.93□□□□□ -1.46
CKAP5-212ENST00000533413 GFPT2O94808 682 aa5.93□□□□□ -1.46
CKAP5-212ENST00000533413 RHOXF2BP0C7M4 288 aa5.93□□□□□ -1.46
CKAP5-212ENST00000533413 MSL3P1P0C860 447 aa5.93□□□□□ -1.46
CKAP5-212ENST00000533413 KRT10P13645 584 aa5.93□□□□□ -1.46
CKAP5-212ENST00000533413 FGFR2P21802 821 aa5.93□□□□□ -1.46
CKAP5-212ENST00000533413 ZAP70P43403 619 aa5.93□□□□□ -1.46
CKAP5-212ENST00000533413 SEPHS1P49903 392 aa5.93□□□□□ -1.46
CKAP5-212ENST00000533413 SCNN1DP51172 638 aa5.93□□□□□ -1.46
CKAP5-212ENST00000533413 PLCD1P51178 756 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms