RNA–Protein interactions for RNA: ENST00000533348.5

GSDMD-213, Transcript of gasdermin D, humanhuman

TSL 5

Gene GSDMD, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-213ENST00000533348 FAM43BQ6ZT52 329 aaPredicted RBP17.19■□□□□ 0.34
GSDMD-213ENST00000533348 PLA2G4DQ86XP0 818 aa17.19■□□□□ 0.34
GSDMD-213ENST00000533348 NME8Q8N427 588 aa17.19■□□□□ 0.34
GSDMD-213ENST00000533348 FIBCD1Q8N539 461 aa17.19■□□□□ 0.34
GSDMD-213ENST00000533348 BRF1Q92994 677 aa17.19■□□□□ 0.34
GSDMD-213ENST00000533348 JAKMIP1Q96N16 626 aaKnown RBP17.19■□□□□ 0.34
GSDMD-213ENST00000533348 AGXT2Q9BYV1 514 aa17.19■□□□□ 0.34
GSDMD-213ENST00000533348 FAM49AQ9H0Q0 323 aaPredicted RBP17.19■□□□□ 0.34
GSDMD-213ENST00000533348 UBE2ZQ9H832 354 aaPredicted RBP17.19■□□□□ 0.34
GSDMD-213ENST00000533348 C6orf50Q9HD87 102 aa17.19■□□□□ 0.34
GSDMD-213ENST00000533348 KIAA1671Q9BY89 1806 aa17.19■□□□□ 0.34
GSDMD-213ENST00000533348 KDM3AQ9Y4C1 1321 aa17.19■□□□□ 0.34
GSDMD-213ENST00000533348 IGLV3-22A0A075B6J6 115 aa17.18■□□□□ 0.34
GSDMD-213ENST00000533348 FAM86B1E9PN63 330 aa17.18■□□□□ 0.34
GSDMD-213ENST00000533348 C5orf67F2Z3F1 127 aa17.18■□□□□ 0.34
GSDMD-213ENST00000533348 M0QZ92 97 aa17.18■□□□□ 0.34
GSDMD-213ENST00000533348 HBP1O60381 514 aa17.18■□□□□ 0.34
GSDMD-213ENST00000533348 RB1P06400 928 aa17.18■□□□□ 0.34
GSDMD-213ENST00000533348 FAM86B2P0C5J1 330 aa17.18■□□□□ 0.34
GSDMD-213ENST00000533348 PKN1Q16512 942 aa17.18■□□□□ 0.34
GSDMD-213ENST00000533348 TIGD5Q53EQ6 642 aa17.18■□□□□ 0.34
GSDMD-213ENST00000533348 FAM160B1Q5W0V3 765 aa17.18■□□□□ 0.34
GSDMD-213ENST00000533348 FTHL17Q9BXU8 183 aa17.18■□□□□ 0.34
GSDMD-213ENST00000533348 AGO3Q9H9G7 860 aaKnown RBP17.18■□□□□ 0.34
GSDMD-213ENST00000533348 RC3H2Q9HBD1 1191 aaKnown RBP17.18■□□□□ 0.34
GSDMD-213ENST00000533348 RWDD3Q9Y3V2 267 aa17.18■□□□□ 0.34
GSDMD-213ENST00000533348 TRPV2Q9Y5S1 764 aa17.18■□□□□ 0.34
GSDMD-213ENST00000533348 COL1A2P08123 1366 aa17.17■□□□□ 0.34
GSDMD-213ENST00000533348 DHX15O43143 795 aaKnown RBP17.17■□□□□ 0.34
GSDMD-213ENST00000533348 REC8O95072 547 aa17.17■□□□□ 0.34
GSDMD-213ENST00000533348 CCNE2O96020 404 aa17.17■□□□□ 0.34
GSDMD-213ENST00000533348 RPS6KB1P23443 525 aa17.17■□□□□ 0.34
GSDMD-213ENST00000533348 PSMA5P28066 241 aa17.17■□□□□ 0.34
GSDMD-213ENST00000533348 GNA11P29992 359 aa17.17■□□□□ 0.34
GSDMD-213ENST00000533348 MTHFD1LQ6UB35 978 aa17.17■□□□□ 0.34
GSDMD-213ENST00000533348 REXO1Q8N1G1 1221 aaKnown RBP17.17■□□□□ 0.34
GSDMD-213ENST00000533348 TRAPPC12Q8WVT3 735 aa17.17■□□□□ 0.34
GSDMD-213ENST00000533348 ZNF689Q96CS4 500 aaPredicted RBP17.17■□□□□ 0.34
GSDMD-213ENST00000533348 ZBTB10Q96DT7 871 aa17.17■□□□□ 0.34
GSDMD-213ENST00000533348 CELF4Q9BZC1 486 aaKnown RBP17.17■□□□□ 0.34
GSDMD-213ENST00000533348 TBC1D22BQ9NU19 505 aa17.17■□□□□ 0.34
GSDMD-213ENST00000533348 ADGRA3Q8IWK6 1321 aa17.17■□□□□ 0.34
GSDMD-213ENST00000533348 IGSF9BQ9UPX0 1349 aa17.17■□□□□ 0.34
GSDMD-213ENST00000533348 DDX39AO00148 427 aaKnown RBP17.16■□□□□ 0.34
GSDMD-213ENST00000533348 IPO5O00410 1097 aaKnown RBP17.16■□□□□ 0.34
GSDMD-213ENST00000533348 EPB41L2O43491 1005 aaKnown RBP17.16■□□□□ 0.34
GSDMD-213ENST00000533348 LINC00271P0C7V0 271 aa17.16■□□□□ 0.34
GSDMD-213ENST00000533348 CD52P31358 61 aa17.16■□□□□ 0.34
GSDMD-213ENST00000533348 BMPR1AP36894 532 aa17.16■□□□□ 0.34
GSDMD-213ENST00000533348 EVCP57679 992 aa17.16■□□□□ 0.34
GSDMD-213ENST00000533348 SETQ01105 290 aaPredicted RBP17.16■□□□□ 0.34
GSDMD-213ENST00000533348 NTRK3Q16288 839 aa17.16■□□□□ 0.34
GSDMD-213ENST00000533348 LEXMQ3ZCV2 418 aa17.16■□□□□ 0.34
GSDMD-213ENST00000533348 RTN4RL1Q86UN2 441 aaPredicted RBP17.16■□□□□ 0.34
GSDMD-213ENST00000533348 CRIPAKQ8N1N5 446 aa17.16■□□□□ 0.34
GSDMD-213ENST00000533348 BANK1Q8NDB2 785 aa17.16■□□□□ 0.34
GSDMD-213ENST00000533348 ATP8B4Q8TF62 1192 aa17.16■□□□□ 0.34
GSDMD-213ENST00000533348 CLP1Q92989 425 aaKnown RBP17.16■□□□□ 0.34
GSDMD-213ENST00000533348 RNF26Q9BY78 433 aaPredicted RBP17.16■□□□□ 0.34
GSDMD-213ENST00000533348 ZNF302Q9NR11 478 aa17.16■□□□□ 0.34
GSDMD-213ENST00000533348 BACH1O14867 736 aa17.15■□□□□ 0.34
GSDMD-213ENST00000533348 DGKIO75912 1065 aa17.15■□□□□ 0.34
GSDMD-213ENST00000533348 KLRC1P26715 233 aa17.15■□□□□ 0.34
GSDMD-213ENST00000533348 CTNNB1P35222 781 aa17.15■□□□□ 0.34
GSDMD-213ENST00000533348 KRT76Q01546 638 aa17.15■□□□□ 0.34
GSDMD-213ENST00000533348 AKAP17AQ02040 695 aaKnown RBP17.15■□□□□ 0.34
GSDMD-213ENST00000533348 TMEM62Q0P6H9 643 aa17.15■□□□□ 0.34
GSDMD-213ENST00000533348 ZNF484Q5JVG2 852 aa17.15■□□□□ 0.34
GSDMD-213ENST00000533348 ZNF746Q6NUN9 644 aaPredicted RBP17.15■□□□□ 0.34
GSDMD-213ENST00000533348 MIS18BP1Q6P0N0 1132 aa17.15■□□□□ 0.34
GSDMD-213ENST00000533348 CCDC60Q8IWA6 550 aaPredicted RBP17.15■□□□□ 0.34
GSDMD-213ENST00000533348 BICD2Q8TD16 824 aa17.15■□□□□ 0.34
GSDMD-213ENST00000533348 LINC01599Q8WXQ3 324 aa17.15■□□□□ 0.34
GSDMD-213ENST00000533348 ZNF577Q9BSK1 485 aa17.15■□□□□ 0.34
GSDMD-213ENST00000533348 C11orf84Q9BUA3 381 aaPredicted RBP17.15■□□□□ 0.34
GSDMD-213ENST00000533348 C1QTNF1Q9BXJ1 281 aa17.15■□□□□ 0.34
GSDMD-213ENST00000533348 LMAN2LQ9H0V9 348 aa17.15■□□□□ 0.34
GSDMD-213ENST00000533348 PADI3Q9ULW8 664 aa17.15■□□□□ 0.34
GSDMD-213ENST00000533348 FNDC1Q4ZHG4 1894 aaPredicted RBP17.15■□□□□ 0.34
GSDMD-213ENST00000533348 ADAMTS3O15072 1205 aa17.14■□□□□ 0.33
GSDMD-213ENST00000533348 IFNAR1P17181 557 aa17.14■□□□□ 0.33
GSDMD-213ENST00000533348 CIITAP33076 1130 aa17.14■□□□□ 0.33
GSDMD-213ENST00000533348 PAK2Q13177 524 aa17.14■□□□□ 0.33
GSDMD-213ENST00000533348 BTG3Q14201 252 aaPredicted RBP17.14■□□□□ 0.33
GSDMD-213ENST00000533348 COL19A1Q14993 1142 aa17.14■□□□□ 0.33
GSDMD-213ENST00000533348 SWSAP1Q6NVH7 229 aa17.14■□□□□ 0.33
GSDMD-213ENST00000533348 PDXDC2PQ6P474 469 aa17.14■□□□□ 0.33
GSDMD-213ENST00000533348 NPAS4Q8IUM7 802 aa17.14■□□□□ 0.33
GSDMD-213ENST00000533348 SMAP1Q8IYB5 467 aaPredicted RBP17.14■□□□□ 0.33
GSDMD-213ENST00000533348 CCDC148Q8NFR7 591 aa17.14■□□□□ 0.33
GSDMD-213ENST00000533348 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.14■□□□□ 0.33
GSDMD-213ENST00000533348 PHKBQ93100 1093 aa17.14■□□□□ 0.33
GSDMD-213ENST00000533348 PLVAPQ9BX97 442 aa17.14■□□□□ 0.33
GSDMD-213ENST00000533348 NSUN3Q9H649 340 aaKnown RBP17.14■□□□□ 0.33
GSDMD-213ENST00000533348 MAFBQ9Y5Q3 323 aaPredicted RBP17.14■□□□□ 0.33
GSDMD-213ENST00000533348 STAG3L1P0CL83 205 aa17.13■□□□□ 0.33
GSDMD-213ENST00000533348 ATP4AP20648 1035 aa17.13■□□□□ 0.33
GSDMD-213ENST00000533348 COL9A1P20849 921 aa17.13■□□□□ 0.33
GSDMD-213ENST00000533348 KCNA5P22460 613 aa17.13■□□□□ 0.33
GSDMD-213ENST00000533348 PDIA3P30101 505 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms