RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 FKBP3Q00688 224 aaKnown RBP12.68□□□□□ -0.38
CSRP1-215ENST00000532313 KLHL30Q0D2K2 578 aa12.68□□□□□ -0.38
CSRP1-215ENST00000532313 SRRTQ9BXP5 876 aaKnown RBP12.68□□□□□ -0.38
CSRP1-215ENST00000532313 PIN4Q9Y237 131 aaKnown RBP12.68□□□□□ -0.38
CSRP1-215ENST00000532313 COL3A1P02461 1466 aaPredicted RBP12.67□□□□□ -0.38
CSRP1-215ENST00000532313 AKR1B15C9JRZ8 316 aaPredicted RBP12.67□□□□□ -0.38
CSRP1-215ENST00000532313 PTPRAP18433 802 aa12.67□□□□□ -0.38
CSRP1-215ENST00000532313 GABPAQ06546 454 aa12.67□□□□□ -0.38
CSRP1-215ENST00000532313 DGKZQ13574 1117 aa12.67□□□□□ -0.38
CSRP1-215ENST00000532313 KARSQ15046 597 aaKnown RBP12.67□□□□□ -0.38
CSRP1-215ENST00000532313 CYB5R4Q7L1T6 521 aa12.67□□□□□ -0.38
CSRP1-215ENST00000532313 TMEM199Q8N511 208 aa12.67□□□□□ -0.38
CSRP1-215ENST00000532313 POLR3FQ9H1D9 316 aaPredicted RBP12.67□□□□□ -0.38
CSRP1-215ENST00000532313 BLZF1Q9H2G9 400 aa12.67□□□□□ -0.38
CSRP1-215ENST00000532313 MAPK8IP1Q9UQF2 711 aa12.67□□□□□ -0.38
CSRP1-215ENST00000532313 SRPRBQ9Y5M8 271 aaKnown RBP12.67□□□□□ -0.38
CSRP1-215ENST00000532313 ZNF746Q6NUN9 644 aaPredicted RBP12.67□□□□□ -0.38
CSRP1-215ENST00000532313 NDUFAF2Q8N183 169 aa12.67□□□□□ -0.38
CSRP1-215ENST00000532313 PPM1KQ8N3J5 372 aa12.67□□□□□ -0.38
CSRP1-215ENST00000532313 UBXN4Q92575 508 aa12.67□□□□□ -0.38
CSRP1-215ENST00000532313 MXRA8Q9BRK3 442 aa12.67□□□□□ -0.38
CSRP1-215ENST00000532313 COLEC11Q9BWP8 271 aa12.67□□□□□ -0.38
CSRP1-215ENST00000532313 MRC1P22897 1456 aa12.67□□□□□ -0.38
CSRP1-215ENST00000532313 GOLGA8CPA6NN73 597 aa12.67□□□□□ -0.38
CSRP1-215ENST00000532313 INTS8Q75QN2 995 aaKnown RBP12.67□□□□□ -0.38
CSRP1-215ENST00000532313 NECAB2Q7Z6G3 386 aa12.67□□□□□ -0.38
CSRP1-215ENST00000532313 DAAM2Q86T65 1068 aa12.67□□□□□ -0.38
CSRP1-215ENST00000532313 CTTNBP2NLQ9P2B4 639 aa12.67□□□□□ -0.38
CSRP1-215ENST00000532313 NR2F2P24468 414 aa12.67□□□□□ -0.38
CSRP1-215ENST00000532313 PTF1AQ7RTS3 328 aa12.67□□□□□ -0.38
CSRP1-215ENST00000532313 TAX1BP1Q86VP1 789 aa12.67□□□□□ -0.38
CSRP1-215ENST00000532313 PPP1R16BQ96T49 567 aa12.67□□□□□ -0.38
CSRP1-215ENST00000532313 DDX50Q9BQ39 737 aaKnown RBP12.67□□□□□ -0.38
CSRP1-215ENST00000532313 LXNQ9BS40 222 aa12.67□□□□□ -0.38
CSRP1-215ENST00000532313 FERP16591 822 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 USP28Q96RU2 1077 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 PRMT7Q9NVM4 692 aaPredicted RBP12.66□□□□□ -0.38
CSRP1-215ENST00000532313 BZW2Q9Y6E2 419 aaKnown RBP12.66□□□□□ -0.38
CSRP1-215ENST00000532313 GAKO14976 1311 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 MEIS1O00470 390 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 AMHP03971 560 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 ITGA4P13612 1032 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 RPS6P62753 249 aaKnown RBP12.66□□□□□ -0.38
CSRP1-215ENST00000532313 THNSL1Q8IYQ7 743 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 MTMR14Q8NCE2 650 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 TMEM169Q96HH4 297 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 CRACR2AQ9BSW2 395 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 MOV10L1Q9BXT6 1211 aaKnown RBP12.66□□□□□ -0.38
CSRP1-215ENST00000532313 PCDHB4Q9Y5E5 795 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 TADA2AO75478 443 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 ERCC5P28715 1186 aaPredicted RBP12.66□□□□□ -0.38
CSRP1-215ENST00000532313 NNMTP40261 264 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 GPC3P51654 580 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 HLTFQ14527 1009 aaKnown RBP eCLIP12.66□□□□□ -0.38
CSRP1-215ENST00000532313 RNF219Q5W0B1 726 aaPredicted RBP12.66□□□□□ -0.38
CSRP1-215ENST00000532313 APOBEC3HQ6NTF7 200 aaKnown RBP12.66□□□□□ -0.38
CSRP1-215ENST00000532313 TAF2Q6P1X5 1199 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 C3orf67Q6ZVT6 689 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 DYDC2Q96IM9 177 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 EMILIN3Q9NT22 766 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 STRIP2Q9ULQ0 834 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 SLFN14P0C7P3 912 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 NSFP46459 744 aaKnown RBP12.66□□□□□ -0.38
CSRP1-215ENST00000532313 PDIA5Q14554 519 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 PKN2Q16513 984 aaKnown RBP12.66□□□□□ -0.38
CSRP1-215ENST00000532313 ARHGAP44Q17R89 818 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 BANK1Q8NDB2 785 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 VPS16Q9H269 839 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 NALCNQ8IZF0 1738 aa12.66□□□□□ -0.38
CSRP1-215ENST00000532313 FAM208AQ9UK61 1670 aaKnown RBP12.65□□□□□ -0.38
CSRP1-215ENST00000532313 DDTLA6NHG4 134 aaPredicted RBP12.65□□□□□ -0.38
CSRP1-215ENST00000532313 EFCAB14O75071 495 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 GBP1P32455 592 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 TTBK2Q6IQ55 1244 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 ACAP3Q96P50 834 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 SLC39A2Q9NP94 309 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 CD4P01730 458 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 CPB1P15086 417 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 SKIDA1Q1XH10 827 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 ZSCAN23Q3MJ62 389 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 TXNRD3Q86VQ6 643 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 UBN1Q9NPG3 1134 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 LCMT1Q9UIC8 334 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 SPDYE5A6NIY4 337 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 HMGCRP04035 888 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 PTGS1P23219 599 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 ALDH7A1P49419 539 aaKnown RBP12.65□□□□□ -0.38
CSRP1-215ENST00000532313 MXI1P50539 228 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 ARL13BQ3SXY8 428 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 CEP57Q86XR8 500 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 IGSF22Q8N9C0 903 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 MAP2K2P36507 400 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 KRT81Q14533 505 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 EXOC3L4Q17RC7 722 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 HS1BP3Q53T59 392 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 HSP90AA4PQ58FG1 418 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 ZNF569Q5MCW4 686 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 CYP26C1Q6V0L0 522 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 TRPM4Q8TD43 1214 aa12.65□□□□□ -0.38
CSRP1-215ENST00000532313 YME1L1Q96TA2 773 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms