RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 DDX39AO00148 427 aaKnown RBP19.14■□□□□ 0.65
CPSF1-207ENST00000531727 ADAMTS3O15072 1205 aa19.14■□□□□ 0.65
CPSF1-207ENST00000531727 REC8O95072 547 aa19.14■□□□□ 0.65
CPSF1-207ENST00000531727 REXO1Q8N1G1 1221 aaKnown RBP19.14■□□□□ 0.65
CPSF1-207ENST00000531727 FIBCD1Q8N539 461 aa19.14■□□□□ 0.65
CPSF1-207ENST00000531727 UBE2ZQ9H832 354 aaPredicted RBP19.14■□□□□ 0.65
CPSF1-207ENST00000531727 AGO3Q9H9G7 860 aaKnown RBP19.14■□□□□ 0.65
CPSF1-207ENST00000531727 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.13■□□□□ 0.65
CPSF1-207ENST00000531727 SMIM35A0A1B0GVV1 85 aa19.13■□□□□ 0.65
CPSF1-207ENST00000531727 IPO5O00410 1097 aaKnown RBP19.13■□□□□ 0.65
CPSF1-207ENST00000531727 DHX15O43143 795 aaKnown RBP19.13■□□□□ 0.65
CPSF1-207ENST00000531727 PSMA5P28066 241 aa19.13■□□□□ 0.65
CPSF1-207ENST00000531727 CD52P31358 61 aa19.13■□□□□ 0.65
CPSF1-207ENST00000531727 TMEM62Q0P6H9 643 aa19.13■□□□□ 0.65
CPSF1-207ENST00000531727 FAM160B1Q5W0V3 765 aa19.13■□□□□ 0.65
CPSF1-207ENST00000531727 MTHFD1LQ6UB35 978 aa19.13■□□□□ 0.65
CPSF1-207ENST00000531727 CCDC60Q8IWA6 550 aaPredicted RBP19.13■□□□□ 0.65
CPSF1-207ENST00000531727 NME8Q8N427 588 aa19.13■□□□□ 0.65
CPSF1-207ENST00000531727 PHKBQ93100 1093 aa19.13■□□□□ 0.65
CPSF1-207ENST00000531727 RC3H2Q9HBD1 1191 aaKnown RBP19.13■□□□□ 0.65
CPSF1-207ENST00000531727 ADGRA3Q8IWK6 1321 aa19.13■□□□□ 0.65
CPSF1-207ENST00000531727 LOXHD1Q8IVV2 1947 aa19.13■□□□□ 0.65
CPSF1-207ENST00000531727 COL1A2P08123 1366 aa19.12■□□□□ 0.65
CPSF1-207ENST00000531727 IGSF9BQ9UPX0 1349 aa19.12■□□□□ 0.65
CPSF1-207ENST00000531727 KDM3AQ9Y4C1 1321 aa19.12■□□□□ 0.65
CPSF1-207ENST00000531727 BACH1O14867 736 aa19.12■□□□□ 0.65
CPSF1-207ENST00000531727 HBP1O60381 514 aa19.12■□□□□ 0.65
CPSF1-207ENST00000531727 GNA11P29992 359 aa19.12■□□□□ 0.65
CPSF1-207ENST00000531727 SETQ01105 290 aaPredicted RBP19.12■□□□□ 0.65
CPSF1-207ENST00000531727 AKAP17AQ02040 695 aaKnown RBP19.12■□□□□ 0.65
CPSF1-207ENST00000531727 NTRK3Q16288 839 aa19.12■□□□□ 0.65
CPSF1-207ENST00000531727 TIGD5Q53EQ6 642 aa19.12■□□□□ 0.65
CPSF1-207ENST00000531727 ATP8B4Q8TF62 1192 aa19.12■□□□□ 0.65
CPSF1-207ENST00000531727 LINC01599Q8WXQ3 324 aa19.12■□□□□ 0.65
CPSF1-207ENST00000531727 ZNF689Q96CS4 500 aaPredicted RBP19.12■□□□□ 0.65
CPSF1-207ENST00000531727 ZNF577Q9BSK1 485 aa19.12■□□□□ 0.65
CPSF1-207ENST00000531727 FTHL17Q9BXU8 183 aa19.12■□□□□ 0.65
CPSF1-207ENST00000531727 RNF26Q9BY78 433 aaPredicted RBP19.12■□□□□ 0.65
CPSF1-207ENST00000531727 CELF4Q9BZC1 486 aaKnown RBP19.12■□□□□ 0.65
CPSF1-207ENST00000531727 ZNF302Q9NR11 478 aa19.12■□□□□ 0.65
CPSF1-207ENST00000531727 TBC1D22BQ9NU19 505 aa19.12■□□□□ 0.65
CPSF1-207ENST00000531727 TTC3P53804 2025 aa19.12■□□□□ 0.65
CPSF1-207ENST00000531727 C5orf67F2Z3F1 127 aa19.11■□□□□ 0.65
CPSF1-207ENST00000531727 RB1P06400 928 aa19.11■□□□□ 0.65
CPSF1-207ENST00000531727 LINC00271P0C7V0 271 aa19.11■□□□□ 0.65
CPSF1-207ENST00000531727 IFNAR1P17181 557 aa19.11■□□□□ 0.65
CPSF1-207ENST00000531727 KLRC1P26715 233 aa19.11■□□□□ 0.65
CPSF1-207ENST00000531727 CTNNB1P35222 781 aa19.11■□□□□ 0.65
CPSF1-207ENST00000531727 EVCP57679 992 aa19.11■□□□□ 0.65
CPSF1-207ENST00000531727 MIS18BP1Q6P0N0 1132 aa19.11■□□□□ 0.65
CPSF1-207ENST00000531727 PDXDC2PQ6P474 469 aa19.11■□□□□ 0.65
CPSF1-207ENST00000531727 BANK1Q8NDB2 785 aa19.11■□□□□ 0.65
CPSF1-207ENST00000531727 CCDC148Q8NFR7 591 aa19.11■□□□□ 0.65
CPSF1-207ENST00000531727 BICD2Q8TD16 824 aa19.11■□□□□ 0.65
CPSF1-207ENST00000531727 PADI3Q9ULW8 664 aa19.11■□□□□ 0.65
CPSF1-207ENST00000531727 RWDD3Q9Y3V2 267 aa19.11■□□□□ 0.65
CPSF1-207ENST00000531727 DGKIO75912 1065 aa19.1■□□□□ 0.65
CPSF1-207ENST00000531727 PDIA3P30101 505 aaKnown RBP19.1■□□□□ 0.65
CPSF1-207ENST00000531727 BMPR1AP36894 532 aa19.1■□□□□ 0.65
CPSF1-207ENST00000531727 KRT76Q01546 638 aa19.1■□□□□ 0.65
CPSF1-207ENST00000531727 PAK2Q13177 524 aa19.1■□□□□ 0.65
CPSF1-207ENST00000531727 ZNF484Q5JVG2 852 aa19.1■□□□□ 0.65
CPSF1-207ENST00000531727 ZNF746Q6NUN9 644 aaPredicted RBP19.1■□□□□ 0.65
CPSF1-207ENST00000531727 SWSAP1Q6NVH7 229 aa19.1■□□□□ 0.65
CPSF1-207ENST00000531727 RTN4RL1Q86UN2 441 aaPredicted RBP19.1■□□□□ 0.65
CPSF1-207ENST00000531727 CLP1Q92989 425 aaKnown RBP19.1■□□□□ 0.65
CPSF1-207ENST00000531727 UIMC1Q96RL1 719 aa19.1■□□□□ 0.65
CPSF1-207ENST00000531727 SLC26A6Q9BXS9 759 aa19.1■□□□□ 0.65
CPSF1-207ENST00000531727 ATG2AQ2TAZ0 1938 aa19.1■□□□□ 0.65
CPSF1-207ENST00000531727 ZBTB42B2RXF5 422 aa19.09■□□□□ 0.65
CPSF1-207ENST00000531727 EPB41L2O43491 1005 aaKnown RBP19.09■□□□□ 0.65
CPSF1-207ENST00000531727 ATP4AP20648 1035 aa19.09■□□□□ 0.65
CPSF1-207ENST00000531727 KCNA5P22460 613 aa19.09■□□□□ 0.65
CPSF1-207ENST00000531727 CIITAP33076 1130 aa19.09■□□□□ 0.65
CPSF1-207ENST00000531727 BTG3Q14201 252 aaPredicted RBP19.09■□□□□ 0.65
CPSF1-207ENST00000531727 LEXMQ3ZCV2 418 aa19.09■□□□□ 0.65
CPSF1-207ENST00000531727 RUFY3Q7L099 469 aa19.09■□□□□ 0.65
CPSF1-207ENST00000531727 NPAS4Q8IUM7 802 aa19.09■□□□□ 0.65
CPSF1-207ENST00000531727 SMAP1Q8IYB5 467 aaPredicted RBP19.09■□□□□ 0.65
CPSF1-207ENST00000531727 CRIPAKQ8N1N5 446 aa19.09■□□□□ 0.65
CPSF1-207ENST00000531727 RASGRP4Q8TDF6 673 aa19.09■□□□□ 0.65
CPSF1-207ENST00000531727 C11orf84Q9BUA3 381 aaPredicted RBP19.09■□□□□ 0.65
CPSF1-207ENST00000531727 NCOA5Q9HCD5 579 aaKnown RBP19.09■□□□□ 0.65
CPSF1-207ENST00000531727 PPFIA3O75145 1194 aa19.08■□□□□ 0.64
CPSF1-207ENST00000531727 CCT2P78371 535 aaKnown RBP19.08■□□□□ 0.64
CPSF1-207ENST00000531727 PRR16Q569H4 304 aa19.08■□□□□ 0.64
CPSF1-207ENST00000531727 TCEAL5Q5H9L2 206 aa19.08■□□□□ 0.64
CPSF1-207ENST00000531727 CKAP2LQ8IYA6 745 aa19.08■□□□□ 0.64
CPSF1-207ENST00000531727 KIAA0319LQ8IZA0 1049 aa19.08■□□□□ 0.64
CPSF1-207ENST00000531727 LENG9Q96B70 501 aa19.08■□□□□ 0.64
CPSF1-207ENST00000531727 LMAN2LQ9H0V9 348 aa19.08■□□□□ 0.64
CPSF1-207ENST00000531727 NSUN3Q9H649 340 aaKnown RBP19.08■□□□□ 0.64
CPSF1-207ENST00000531727 ZSWIM6Q9HCJ5 1215 aa19.08■□□□□ 0.64
CPSF1-207ENST00000531727 VPS54Q9P1Q0 977 aa19.08■□□□□ 0.64
CPSF1-207ENST00000531727 TCEAL9Q9UHQ7 104 aa19.08■□□□□ 0.64
CPSF1-207ENST00000531727 MAFBQ9Y5Q3 323 aaPredicted RBP19.08■□□□□ 0.64
CPSF1-207ENST00000531727 BDP1A6H8Y1 2624 aa19.07■□□□□ 0.64
CPSF1-207ENST00000531727 KIAA1671Q9BY89 1806 aa19.07■□□□□ 0.64
CPSF1-207ENST00000531727 MYH9P35579 1960 aaKnown RBP19.07■□□□□ 0.64
CPSF1-207ENST00000531727 PSAPP07602 524 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms