RNA–Protein interactions for RNA: ENST00000530903.1

RPUSD4-205, Transcript of RNA pseudouridylate synthase domain containing 4, human

TSL 2

Gene RPUSD4, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPUSD4-205	ENST00000530903	CCDC144B	Q3MJ40	725 aa		11.19	□□□□□ -0.62
RPUSD4-205	ENST00000530903	CELF3	Q5SZQ8	465 aa	Known RBP	11.19	□□□□□ -0.62
RPUSD4-205	ENST00000530903	CCDC183	Q5T5S1	534 aa		11.19	□□□□□ -0.62
RPUSD4-205	ENST00000530903	ZNF746	Q6NUN9	644 aa	Predicted RBP	11.19	□□□□□ -0.62
RPUSD4-205	ENST00000530903	KRBA2	Q6ZNG9	492 aa		11.19	□□□□□ -0.62
RPUSD4-205	ENST00000530903	CATSPER3	Q86XQ3	398 aa		11.19	□□□□□ -0.62
RPUSD4-205	ENST00000530903	GRAMD1C	Q8IYS0	662 aa		11.19	□□□□□ -0.62
RPUSD4-205	ENST00000530903	IQUB	Q8NA54	791 aa		11.19	□□□□□ -0.62
RPUSD4-205	ENST00000530903	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.19	□□□□□ -0.62
RPUSD4-205	ENST00000530903	BANK1	Q8NDB2	785 aa		11.19	□□□□□ -0.62
RPUSD4-205	ENST00000530903	CNNM3	Q8NE01	707 aa		11.19	□□□□□ -0.62
RPUSD4-205	ENST00000530903	LRRC15	Q8TF66	581 aa		11.19	□□□□□ -0.62
RPUSD4-205	ENST00000530903	SYAP1	Q96A49	352 aa	Predicted RBP	11.19	□□□□□ -0.62
RPUSD4-205	ENST00000530903	ZMYND15	Q9H091	742 aa		11.19	□□□□□ -0.62
RPUSD4-205	ENST00000530903	NUP62CL	Q9H1M0	184 aa		11.19	□□□□□ -0.62
RPUSD4-205	ENST00000530903	MLXIP	Q9HAP2	919 aa		11.19	□□□□□ -0.62
RPUSD4-205	ENST00000530903	KDM3A	Q9Y4C1	1321 aa		11.19	□□□□□ -0.62
RPUSD4-205	ENST00000530903	RBM47	A0AV96	593 aa	Known RBP	11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	FOXN1	O15353	648 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	IGHA2	P01877	340 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	SPATA31C1	P0DKV0	1188 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	RPA1	P27694	616 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	SFN	P31947	248 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	ACTR2	P61160	394 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	TRIM32	Q13049	653 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	TMEM119	Q4V9L6	283 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	MFSD14C	Q5VZR4	134 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	METTL7B	Q6UX53	244 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	KCNK18	Q7Z418	384 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	TPH2	Q8IWU9	490 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	DHX37	Q8IY37	1157 aa	Known RBP	11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	CEP57L1	Q8IYX8	460 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	RAET1E	Q8TD07	263 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	TIGD1	Q96MW7	591 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	SPATA33	Q96N06	139 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	PYM1	Q9BRP8	204 aa	Known RBP	11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	TNMD	Q9H2S6	317 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	KIAA1024	Q9UPX6	916 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	MYH9	P35579	1960 aa	Known RBP	11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903		E9PMD0	336 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	ADCY6	O43306	1168 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	SLITRK3	O94933	977 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	GNRH1	P01148	92 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	PSAP	P07602	524 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	TPM2	P07951	284 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	SLFN14	P0C7P3	912 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	SMPD1	P17405	629 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	AFM	P43652	599 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	TNFAIP2	Q03169	654 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	ARHGAP1	Q07960	439 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	IRF5	Q13568	498 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	DHX8	Q14562	1220 aa	Known RBP	11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	ARHGEF6	Q15052	776 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	UGCG	Q16739	394 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	NAALADL2	Q58DX5	795 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	HYI	Q5T013	277 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	MIS18BP1	Q6P0N0	1132 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	PDXDC2P	Q6P474	469 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	CKAP2L	Q8IYA6	745 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	TRPV1	Q8NER1	839 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	STAM	Q92783	540 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	ERCC4	Q92889	916 aa	Predicted RBP	11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	LENG1	Q96BZ8	264 aa	Predicted RBP	11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	HSD17B14	Q9BPX1	270 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	LXN	Q9BS40	222 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	NT5C3A	Q9H0P0	336 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	TUFT1	Q9NNX1	390 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	BLOC1S4	Q9NUP1	217 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	WRAP73	Q9P2S5	460 aa	Predicted RBP	11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	TRIM17	Q9Y577	477 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	PCDHA10	Q9Y5I2	948 aa		11.18	□□□□□ -0.62
RPUSD4-205	ENST00000530903	GSTTP1	A0A1W2PQM5	241 aa		11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	NOP56	O00567	594 aa	Known RBP	11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	BACH1	O14867	736 aa		11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	SLC26A4	O43511	780 aa		11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	ADCY3	O60266	1144 aa		11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	GH1	P01241	217 aa		11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	P4HB	P07237	508 aa	Known RBP	11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	SUPT20HL2	P0C7V6	817 aa		11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	PSMC6	P62333	389 aa		11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	PNOC	Q13519	176 aa		11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	MCM6	Q14566	821 aa		11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	ZSCAN23	Q3MJ62	389 aa		11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	HSDL1	Q3SXM5	330 aa		11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	DUSP28	Q4G0W2	176 aa		11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	IQSEC1	Q6DN90	963 aa		11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	SWSAP1	Q6NVH7	229 aa		11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	ABHD15	Q6UXT9	468 aa		11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	TRMT44	Q8IYL2	757 aa	Known RBP	11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	RDM1	Q8NG50	284 aa		11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	NEK9	Q8TD19	979 aa		11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	LARP4B	Q92615	738 aa	Known RBP	11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	RAD54L	Q92698	747 aa		11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	PAGE5	Q96GU1	130 aa		11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	GABBR1	Q9UBS5	961 aa		11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	STK17A	Q9UEE5	414 aa		11.17	□□□□□ -0.62
RPUSD4-205	ENST00000530903	USP25	Q9UHP3	1055 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms