RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 C6orf222P0C671 652 aaPredicted RBP11.9□□□□□ -0.5
SOX6-213ENST00000530378 PRKCEQ02156 737 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 LAMC2Q13753 1193 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 CCDC183Q5T5S1 534 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 TRMT44Q8IYL2 757 aaKnown RBP11.9□□□□□ -0.5
SOX6-213ENST00000530378 SLAIN1Q8ND83 568 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 LARP4BQ92615 738 aaKnown RBP11.9□□□□□ -0.5
SOX6-213ENST00000530378 PAGE5Q96GU1 130 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 BHMT2Q9H2M3 363 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 POLD4Q9HCU8 107 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 TUFT1Q9NNX1 390 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 SEPT9Q9UHD8 586 aaPredicted RBP11.9□□□□□ -0.5
SOX6-213ENST00000530378 SYNRGQ9UMZ2 1314 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 IGSF9BQ9UPX0 1349 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 NPHP3-ACAD11A0A0J9YXS1 232 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 SYCE3A1L190 88 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 SEPT4O43236 478 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 SLFN14P0C7P3 912 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 PLA2G4BP0C869 781 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 PSMC5P62195 406 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 SLC9C1Q4G0N8 1177 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 PPTC7Q8NI37 304 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 PXYLP1Q8TE99 480 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 SEPT1Q8WYJ6 367 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 CCDC43Q96MW1 224 aaKnown RBP11.9□□□□□ -0.5
SOX6-213ENST00000530378 MTRQ99707 1265 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 NT5C3AQ9H0P0 336 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 AP5M1Q9H0R1 490 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 ZSWIM4Q9H7M6 989 aa11.9□□□□□ -0.5
SOX6-213ENST00000530378 KAT6AQ92794 2004 aa11.89□□□□□ -0.51
SOX6-213ENST00000530378 BIN1O00499 593 aa11.89□□□□□ -0.51
SOX6-213ENST00000530378 LGALS2P05162 132 aa11.89□□□□□ -0.51
SOX6-213ENST00000530378 MYL3P08590 195 aa11.89□□□□□ -0.51
SOX6-213ENST00000530378 RARBP10826 455 aa11.89□□□□□ -0.51
SOX6-213ENST00000530378 YWHABP31946 246 aaKnown RBP11.89□□□□□ -0.51
SOX6-213ENST00000530378 PRMT2P55345 433 aa11.89□□□□□ -0.51
SOX6-213ENST00000530378 NPEPPSP55786 919 aa11.89□□□□□ -0.51
SOX6-213ENST00000530378 CUL4BQ13620 913 aa11.89□□□□□ -0.51
SOX6-213ENST00000530378 ZSCAN23Q3MJ62 389 aa11.89□□□□□ -0.51
SOX6-213ENST00000530378 HYIQ5T013 277 aa11.89□□□□□ -0.51
SOX6-213ENST00000530378 ISM2Q6H9L7 571 aa11.89□□□□□ -0.51
SOX6-213ENST00000530378 DYMQ7RTS9 669 aa11.89□□□□□ -0.51
SOX6-213ENST00000530378 GPBP1Q86WP2 473 aa11.89□□□□□ -0.51
SOX6-213ENST00000530378 RDM1Q8NG50 284 aa11.89□□□□□ -0.51
SOX6-213ENST00000530378 NEK9Q8TD19 979 aa11.89□□□□□ -0.51
SOX6-213ENST00000530378 ATP6V0A1Q93050 837 aa11.89□□□□□ -0.51
SOX6-213ENST00000530378 SYAP1Q96A49 352 aaPredicted RBP11.89□□□□□ -0.51
SOX6-213ENST00000530378 RUSC1Q9BVN2 902 aa11.89□□□□□ -0.51
SOX6-213ENST00000530378 AZI2Q9H6S1 392 aa11.89□□□□□ -0.51
SOX6-213ENST00000530378 DNM3Q9UQ16 869 aa11.89□□□□□ -0.51
SOX6-213ENST00000530378 NKRFO15226 690 aaKnown RBP eCLIP11.88□□□□□ -0.51
SOX6-213ENST00000530378 ATG7O95352 703 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 ATP4AP20648 1035 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 STAT5BP51692 787 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 POSTNQ15063 836 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 MTFR1Q15390 333 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 FSCN1Q16658 493 aaKnown RBP11.88□□□□□ -0.51
SOX6-213ENST00000530378 MTERF2Q49AM1 385 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 MAP3K21Q5TCX8 1036 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 FAM160B1Q5W0V3 765 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 ANO5Q75V66 913 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 MAEAQ7L5Y9 396 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 UNC93B1Q9H1C4 597 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 XPNPEP3Q9NQH7 507 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 STK17AQ9UEE5 414 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 USO1O60763 962 aaKnown RBP11.88□□□□□ -0.51
SOX6-213ENST00000530378 OATP04181 439 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 KRT18P05783 430 aaKnown RBP11.88□□□□□ -0.51
SOX6-213ENST00000530378 XKR9Q5GH70 373 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 SV2BQ7L1I2 683 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 CTU1Q7Z7A3 348 aaKnown RBP11.88□□□□□ -0.51
SOX6-213ENST00000530378 TRAPPC12Q8WVT3 735 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 EVPLQ92817 2033 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 EMID1Q96A84 441 aaPredicted RBP11.88□□□□□ -0.51
SOX6-213ENST00000530378 ZBTB10Q96DT7 871 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 TIGD1Q96MW7 591 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 NACC1Q96RE7 527 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 NRBP1Q9UHY1 535 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 TRPC6Q9Y210 931 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 STK24Q9Y6E0 443 aa11.88□□□□□ -0.51
SOX6-213ENST00000530378 TRIP12Q14669 1992 aaPredicted RBP11.88□□□□□ -0.51
SOX6-213ENST00000530378 EMSYQ7Z589 1322 aa11.87□□□□□ -0.51
SOX6-213ENST00000530378 IGKV6D-21A0A0A0MT36 114 aa11.87□□□□□ -0.51
SOX6-213ENST00000530378 ARHGEF35A5YM69 484 aa11.87□□□□□ -0.51
SOX6-213ENST00000530378 MYMKA6NI61 221 aa11.87□□□□□ -0.51
SOX6-213ENST00000530378 CCDC85CA6NKD9 419 aa11.87□□□□□ -0.51
SOX6-213ENST00000530378 CTAGE5O15320 804 aa11.87□□□□□ -0.51
SOX6-213ENST00000530378 DUSP11O75319 330 aaKnown RBP11.87□□□□□ -0.51
SOX6-213ENST00000530378 LGR5O75473 907 aa11.87□□□□□ -0.51
SOX6-213ENST00000530378 EYA4O95677 639 aa11.87□□□□□ -0.51
SOX6-213ENST00000530378 SLC12A3P55017 1021 aa11.87□□□□□ -0.51
SOX6-213ENST00000530378 IGBP1P78318 339 aa11.87□□□□□ -0.51
SOX6-213ENST00000530378 ASIC1P78348 528 aa11.87□□□□□ -0.51
SOX6-213ENST00000530378 PLCB4Q15147 1175 aa11.87□□□□□ -0.51
SOX6-213ENST00000530378 DGKDQ16760 1214 aa11.87□□□□□ -0.51
SOX6-213ENST00000530378 PYM1Q9BRP8 204 aaKnown RBP11.87□□□□□ -0.51
SOX6-213ENST00000530378 HMX1Q9NP08 348 aaPredicted RBP11.87□□□□□ -0.51
SOX6-213ENST00000530378 KBTBD4Q9NVX7 518 aa11.87□□□□□ -0.51
SOX6-213ENST00000530378 DDX20Q9UHI6 824 aaKnown RBP11.87□□□□□ -0.51
SOX6-213ENST00000530378 MAFBQ9Y5Q3 323 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms