RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 DSCC1Q9BVC3 393 aa21.85■■□□□ 1.09
SSRP1-204ENST00000529002 ERAP1Q9NZ08 941 aa21.85■■□□□ 1.09
SSRP1-204ENST00000529002 LRFN2Q9ULH4 789 aa21.85■■□□□ 1.09
SSRP1-204ENST00000529002 GALR2O43603 387 aaPredicted RBP21.84■■□□□ 1.09
SSRP1-204ENST00000529002 MGEA5O60502 916 aa21.84■■□□□ 1.09
SSRP1-204ENST00000529002 FGF18O76093 207 aa21.84■■□□□ 1.09
SSRP1-204ENST00000529002 TECP42680 631 aa21.84■■□□□ 1.09
SSRP1-204ENST00000529002 PAK2Q13177 524 aa21.84■■□□□ 1.09
SSRP1-204ENST00000529002 FAM102BQ5T8I3 360 aa21.84■■□□□ 1.09
SSRP1-204ENST00000529002 SYCE2Q6PIF2 218 aa21.84■■□□□ 1.09
SSRP1-204ENST00000529002 NLRX1Q86UT6 975 aa21.84■■□□□ 1.09
SSRP1-204ENST00000529002 TMEM105Q8N8V8 129 aa21.84■■□□□ 1.09
SSRP1-204ENST00000529002 FTHL17Q9BXU8 183 aa21.84■■□□□ 1.09
SSRP1-204ENST00000529002 CNNM2Q9H8M5 875 aa21.84■■□□□ 1.09
SSRP1-204ENST00000529002 DIAPH3Q9NSV4 1193 aa21.84■■□□□ 1.09
SSRP1-204ENST00000529002 IGSF9BQ9UPX0 1349 aa21.83■■□□□ 1.09
SSRP1-204ENST00000529002 PRR23AA6NEV1 266 aa21.83■■□□□ 1.09
SSRP1-204ENST00000529002 TBKBP1A7MCY6 615 aa21.83■■□□□ 1.09
SSRP1-204ENST00000529002 PROB1E7EW31 1015 aa21.83■■□□□ 1.09
SSRP1-204ENST00000529002 MEIS2O14770 477 aa21.83■■□□□ 1.09
SSRP1-204ENST00000529002 ITGB5P18084 799 aa21.83■■□□□ 1.09
SSRP1-204ENST00000529002 IER5Q5VY09 327 aa21.83■■□□□ 1.09
SSRP1-204ENST00000529002 PLPP4Q5VZY2 271 aa21.83■■□□□ 1.09
SSRP1-204ENST00000529002 ANKRD54Q6NXT1 300 aa21.83■■□□□ 1.09
SSRP1-204ENST00000529002 KREMEN2Q8NCW0 462 aa21.83■■□□□ 1.09
SSRP1-204ENST00000529002 IRF2BPLQ9H1B7 796 aa21.83■■□□□ 1.09
SSRP1-204ENST00000529002 TSHZ2Q9NRE2 1034 aa21.83■■□□□ 1.09
SSRP1-204ENST00000529002 TMEM260Q9NX78 707 aa21.83■■□□□ 1.09
SSRP1-204ENST00000529002 PCDHB12Q9Y5F1 795 aa21.83■■□□□ 1.09
SSRP1-204ENST00000529002 FSCN2O14926 492 aa21.82■■□□□ 1.08
SSRP1-204ENST00000529002 NFX1Q12986 1120 aaKnown RBP21.82■■□□□ 1.08
SSRP1-204ENST00000529002 TRAF1Q13077 416 aa21.82■■□□□ 1.08
SSRP1-204ENST00000529002 KCNC3Q14003 757 aa21.82■■□□□ 1.08
SSRP1-204ENST00000529002 B4GALNT3Q6L9W6 998 aa21.82■■□□□ 1.08
SSRP1-204ENST00000529002 THNSL1Q8IYQ7 743 aa21.82■■□□□ 1.08
SSRP1-204ENST00000529002 CELF4Q9BZC1 486 aaKnown RBP21.82■■□□□ 1.08
SSRP1-204ENST00000529002 SMARCAD1Q9H4L7 1026 aa21.82■■□□□ 1.08
SSRP1-204ENST00000529002 TRPC6Q9Y210 931 aa21.82■■□□□ 1.08
SSRP1-204ENST00000529002 IFIT3O14879 490 aaKnown RBP21.81■■□□□ 1.08
SSRP1-204ENST00000529002 BRD1O95696 1058 aa21.81■■□□□ 1.08
SSRP1-204ENST00000529002 ARP10275 920 aa21.81■■□□□ 1.08
SSRP1-204ENST00000529002 FOXK2Q01167 660 aa21.81■■□□□ 1.08
SSRP1-204ENST00000529002 TROAPQ12815 778 aa21.81■■□□□ 1.08
SSRP1-204ENST00000529002 DIEXFQ68CQ4 756 aaKnown RBP21.81■■□□□ 1.08
SSRP1-204ENST00000529002 COLGALT1Q8NBJ5 622 aa21.81■■□□□ 1.08
SSRP1-204ENST00000529002 GIMAP8Q8ND71 665 aaPredicted RBP21.81■■□□□ 1.08
SSRP1-204ENST00000529002 CDHR5Q9HBB8 845 aa21.81■■□□□ 1.08
SSRP1-204ENST00000529002 TYW1Q9NV66 732 aaKnown RBP21.81■■□□□ 1.08
SSRP1-204ENST00000529002 PCDHB7Q9Y5E2 793 aa21.81■■□□□ 1.08
SSRP1-204ENST00000529002 SQORQ9Y6N5 450 aa21.81■■□□□ 1.08
SSRP1-204ENST00000529002 DCHS1Q96JQ0 3298 aa21.81■■□□□ 1.08
SSRP1-204ENST00000529002 HIDE1A8MVS5 230 aa21.8■■□□□ 1.08
SSRP1-204ENST00000529002 M0QZ92 97 aa21.8■■□□□ 1.08
SSRP1-204ENST00000529002 SARSP49591 514 aaKnown RBP21.8■■□□□ 1.08
SSRP1-204ENST00000529002 UBE3AQ05086 875 aa21.8■■□□□ 1.08
SSRP1-204ENST00000529002 PLEKHM2Q8IWE5 1019 aa21.8■■□□□ 1.08
SSRP1-204ENST00000529002 CUL5Q93034 780 aa21.8■■□□□ 1.08
SSRP1-204ENST00000529002 GPRASP2Q96D09 838 aa21.8■■□□□ 1.08
SSRP1-204ENST00000529002 GINS2Q9Y248 185 aa21.8■■□□□ 1.08
SSRP1-204ENST00000529002 TAF6LQ9Y6J9 622 aa21.8■■□□□ 1.08
SSRP1-204ENST00000529002 DMDP11532 3685 aa21.8■■□□□ 1.08
SSRP1-204ENST00000529002 RRN3P2A6NIE6 340 aa21.79■■□□□ 1.08
SSRP1-204ENST00000529002 C2CD4DB7Z1M9 353 aa21.79■■□□□ 1.08
SSRP1-204ENST00000529002 NBL1P41271 181 aa21.79■■□□□ 1.08
SSRP1-204ENST00000529002 PLCB4Q15147 1175 aa21.79■■□□□ 1.08
SSRP1-204ENST00000529002 FRMD5Q7Z6J6 570 aa21.79■■□□□ 1.08
SSRP1-204ENST00000529002 CWH43Q9H720 699 aa21.79■■□□□ 1.08
SSRP1-204ENST00000529002 NOC2LQ9Y3T9 749 aaKnown RBP21.79■■□□□ 1.08
SSRP1-204ENST00000529002 PCDHA2Q9Y5H9 948 aa21.79■■□□□ 1.08
SSRP1-204ENST00000529002 VPS13AQ96RL7 3174 aa21.78■■□□□ 1.08
SSRP1-204ENST00000529002 ASGR2P07307 311 aa21.78■■□□□ 1.08
SSRP1-204ENST00000529002 FGFR1P11362 822 aa21.78■■□□□ 1.08
SSRP1-204ENST00000529002 KRT76Q01546 638 aa21.78■■□□□ 1.08
SSRP1-204ENST00000529002 HDAC1Q13547 482 aaPredicted RBP21.78■■□□□ 1.08
SSRP1-204ENST00000529002 XRRA1Q6P2D8 792 aa21.78■■□□□ 1.08
SSRP1-204ENST00000529002 TMEM184AQ6ZMB5 413 aa21.78■■□□□ 1.08
SSRP1-204ENST00000529002 TMEM40Q8WWA1 233 aa21.78■■□□□ 1.08
SSRP1-204ENST00000529002 PPP1R16BQ96T49 567 aa21.78■■□□□ 1.08
SSRP1-204ENST00000529002 CDCA3Q99618 268 aaPredicted RBP21.78■■□□□ 1.08
SSRP1-204ENST00000529002 ADAM2Q99965 735 aa21.78■■□□□ 1.08
SSRP1-204ENST00000529002 MYL10Q9BUA6 226 aa21.78■■□□□ 1.08
SSRP1-204ENST00000529002 ERVK-5Q9HDB9 667 aa21.78■■□□□ 1.08
SSRP1-204ENST00000529002 UBIAD1Q9Y5Z9 338 aa21.78■■□□□ 1.08
SSRP1-204ENST00000529002 GVINP1Q7Z2Y8 2422 aa21.78■■□□□ 1.08
SSRP1-204ENST00000529002 PIK3CDO00329 1044 aa21.77■■□□□ 1.08
SSRP1-204ENST00000529002 WEE2P0C1S8 567 aa21.77■■□□□ 1.08
SSRP1-204ENST00000529002 PBX3P40426 434 aa21.77■■□□□ 1.08
SSRP1-204ENST00000529002 UBE2SQ16763 222 aa21.77■■□□□ 1.08
SSRP1-204ENST00000529002 POMKQ9H5K3 350 aa21.77■■□□□ 1.08
SSRP1-204ENST00000529002 AAASQ9NRG9 546 aa21.77■■□□□ 1.08
SSRP1-204ENST00000529002 MTMR1Q13613 665 aa21.76■■□□□ 1.07
SSRP1-204ENST00000529002 WTAPQ15007 396 aa21.76■■□□□ 1.07
SSRP1-204ENST00000529002 TCF25Q9BQ70 676 aa21.76■■□□□ 1.07
SSRP1-204ENST00000529002 ENTPD7Q9NQZ7 604 aa21.76■■□□□ 1.07
SSRP1-204ENST00000529002 SORCS3Q9UPU3 1222 aa21.76■■□□□ 1.07
SSRP1-204ENST00000529002 KDM3AQ9Y4C1 1321 aa21.76■■□□□ 1.07
SSRP1-204ENST00000529002 C9IYK1 514 aa21.75■■□□□ 1.07
SSRP1-204ENST00000529002 NUBP1P53384 320 aa21.75■■□□□ 1.07
SSRP1-204ENST00000529002 KANK3Q6NY19 840 aa21.75■■□□□ 1.07
SSRP1-204ENST00000529002 MTHFD1LQ6UB35 978 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms