RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 ZSCAN23Q3MJ62 389 aa27.61■■■□□ 2.01
LDLRAD3-203ENST00000528989 GLG1Q92896 1179 aa27.61■■■□□ 2.01
LDLRAD3-203ENST00000528989 SYAP1Q96A49 352 aaPredicted RBP27.61■■■□□ 2.01
LDLRAD3-203ENST00000528989 MMP3P08254 477 aa27.6■■■□□ 2.01
LDLRAD3-203ENST00000528989 MUTP22033 750 aa27.6■■■□□ 2.01
LDLRAD3-203ENST00000528989 SLC12A3P55017 1021 aa27.6■■■□□ 2.01
LDLRAD3-203ENST00000528989 BEX3Q00994 111 aa27.6■■■□□ 2.01
LDLRAD3-203ENST00000528989 CUL4BQ13620 913 aa27.6■■■□□ 2.01
LDLRAD3-203ENST00000528989 POSTNQ15063 836 aa27.6■■■□□ 2.01
LDLRAD3-203ENST00000528989 ANO5Q75V66 913 aa27.6■■■□□ 2.01
LDLRAD3-203ENST00000528989 SV2BQ7L1I2 683 aa27.6■■■□□ 2.01
LDLRAD3-203ENST00000528989 ATP6V0A1Q93050 837 aa27.6■■■□□ 2.01
LDLRAD3-203ENST00000528989 CUEDC2Q9H467 287 aa27.6■■■□□ 2.01
LDLRAD3-203ENST00000528989 IGSF9BQ9UPX0 1349 aa27.6■■■□□ 2.01
LDLRAD3-203ENST00000528989 LYPLA2O95372 231 aa27.59■■■□□ 2.01
LDLRAD3-203ENST00000528989 MARK3P27448 753 aa27.59■■■□□ 2.01
LDLRAD3-203ENST00000528989 PRKCEQ02156 737 aa27.59■■■□□ 2.01
LDLRAD3-203ENST00000528989 PLA2G4FQ68DD2 849 aa27.59■■■□□ 2.01
LDLRAD3-203ENST00000528989 AZI2Q9H6S1 392 aa27.59■■■□□ 2.01
LDLRAD3-203ENST00000528989 DNAH12Q6ZR08 3092 aa27.59■■■□□ 2.01
LDLRAD3-203ENST00000528989 SYCE3A1L190 88 aa27.59■■■□□ 2.01
LDLRAD3-203ENST00000528989 DUSP11O75319 330 aaKnown RBP27.59■■■□□ 2.01
LDLRAD3-203ENST00000528989 LGR5O75473 907 aa27.59■■■□□ 2.01
LDLRAD3-203ENST00000528989 EYA4O95677 639 aa27.59■■■□□ 2.01
LDLRAD3-203ENST00000528989 PGK1P00558 417 aa27.59■■■□□ 2.01
LDLRAD3-203ENST00000528989 ZNF286BP0CG31 522 aa27.59■■■□□ 2.01
LDLRAD3-203ENST00000528989 KANK3Q6NY19 840 aa27.59■■■□□ 2.01
LDLRAD3-203ENST00000528989 MYADML2A6NDP7 307 aa27.58■■■□□ 2.01
LDLRAD3-203ENST00000528989 MYMKA6NI61 221 aa27.58■■■□□ 2.01
LDLRAD3-203ENST00000528989 A6NJR5 290 aa27.58■■■□□ 2.01
LDLRAD3-203ENST00000528989 CTAGE5O15320 804 aa27.58■■■□□ 2.01
LDLRAD3-203ENST00000528989 PPFIA4O75335 1185 aa27.58■■■□□ 2.01
LDLRAD3-203ENST00000528989 MYCP01106 439 aaPredicted RBP27.58■■■□□ 2.01
LDLRAD3-203ENST00000528989 NPEPPSP55786 919 aa27.58■■■□□ 2.01
LDLRAD3-203ENST00000528989 AFAP1L1Q8TED9 768 aa27.58■■■□□ 2.01
LDLRAD3-203ENST00000528989 AP5M1Q9H0R1 490 aa27.58■■■□□ 2.01
LDLRAD3-203ENST00000528989 Q9Y3F1 56 aa27.58■■■□□ 2.01
LDLRAD3-203ENST00000528989 LGALS2P05162 132 aa27.57■■■□□ 2
LDLRAD3-203ENST00000528989 RAD51AP2Q09MP3 1159 aa27.57■■■□□ 2
LDLRAD3-203ENST00000528989 SYT2Q8N9I0 419 aaPredicted RBP27.57■■■□□ 2
LDLRAD3-203ENST00000528989 C16orf70Q9BSU1 422 aa27.57■■■□□ 2
LDLRAD3-203ENST00000528989 POLD4Q9HCU8 107 aa27.57■■■□□ 2
LDLRAD3-203ENST00000528989 PCDHA5Q9Y5H7 936 aa27.57■■■□□ 2
LDLRAD3-203ENST00000528989 NPHP3-ACAD11A0A0J9YXS1 232 aa27.57■■■□□ 2
LDLRAD3-203ENST00000528989 ARSHQ5FYA8 562 aa27.57■■■□□ 2
LDLRAD3-203ENST00000528989 FAM160B1Q5W0V3 765 aa27.57■■■□□ 2
LDLRAD3-203ENST00000528989 DYMQ7RTS9 669 aa27.57■■■□□ 2
LDLRAD3-203ENST00000528989 ELOA2Q8IYF1 753 aaPredicted RBP27.57■■■□□ 2
LDLRAD3-203ENST00000528989 C6orf222P0C671 652 aaPredicted RBP27.56■■■□□ 2
LDLRAD3-203ENST00000528989 RARBP10826 455 aa27.56■■■□□ 2
LDLRAD3-203ENST00000528989 CTCFP49711 727 aaPredicted RBP27.56■■■□□ 2
LDLRAD3-203ENST00000528989 RARRES1P49788 294 aa27.56■■■□□ 2
LDLRAD3-203ENST00000528989 DPYDQ12882 1025 aa27.56■■■□□ 2
LDLRAD3-203ENST00000528989 DGKDQ16760 1214 aa27.56■■■□□ 2
LDLRAD3-203ENST00000528989 RBM43Q6ZSC3 357 aaKnown RBP27.56■■■□□ 2
LDLRAD3-203ENST00000528989 RNPEPQ9H4A4 650 aa27.56■■■□□ 2
LDLRAD3-203ENST00000528989 KIAA1468Q9P260 1216 aa27.56■■■□□ 2
LDLRAD3-203ENST00000528989 EMSYQ7Z589 1322 aa27.55■■■□□ 2
LDLRAD3-203ENST00000528989 SYNRGQ9UMZ2 1314 aa27.55■■■□□ 2
LDLRAD3-203ENST00000528989 HOXD8P13378 290 aaPredicted RBP27.55■■■□□ 2
LDLRAD3-203ENST00000528989 CYP11B2P19099 503 aa27.55■■■□□ 2
LDLRAD3-203ENST00000528989 PLPPR4Q7Z2D5 763 aa27.55■■■□□ 2
LDLRAD3-203ENST00000528989 RUSC1Q9BVN2 902 aa27.55■■■□□ 2
LDLRAD3-203ENST00000528989 TRIM9Q9C026 710 aa27.55■■■□□ 2
LDLRAD3-203ENST00000528989 SMARCAD1Q9H4L7 1026 aa27.55■■■□□ 2
LDLRAD3-203ENST00000528989 MAGEF1Q9HAY2 307 aa27.55■■■□□ 2
LDLRAD3-203ENST00000528989 OATP04181 439 aa27.55■■■□□ 2
LDLRAD3-203ENST00000528989 CACNB1Q02641 598 aaPredicted RBP27.55■■■□□ 2
LDLRAD3-203ENST00000528989 FSCN1Q16658 493 aaKnown RBP27.55■■■□□ 2
LDLRAD3-203ENST00000528989 ISM2Q6H9L7 571 aa27.55■■■□□ 2
LDLRAD3-203ENST00000528989 GPBP1Q86WP2 473 aa27.55■■■□□ 2
LDLRAD3-203ENST00000528989 KCTD17Q8N5Z5 321 aa27.55■■■□□ 2
LDLRAD3-203ENST00000528989 DDX12PQ92771 950 aa27.55■■■□□ 2
LDLRAD3-203ENST00000528989 HMX1Q9NP08 348 aaPredicted RBP27.55■■■□□ 2
LDLRAD3-203ENST00000528989 SEPT9Q9UHD8 586 aaPredicted RBP27.55■■■□□ 2
LDLRAD3-203ENST00000528989 GJA9P57773 515 aa27.54■■■□□ 2
LDLRAD3-203ENST00000528989 SLC9C1Q4G0N8 1177 aa27.54■■■□□ 2
LDLRAD3-203ENST00000528989 XKR9Q5GH70 373 aa27.54■■■□□ 2
LDLRAD3-203ENST00000528989 XKR3Q5GH77 459 aa27.54■■■□□ 2
LDLRAD3-203ENST00000528989 RINT1Q6NUQ1 792 aa27.54■■■□□ 2
LDLRAD3-203ENST00000528989 XPNPEP3Q9NQH7 507 aa27.54■■■□□ 2
LDLRAD3-203ENST00000528989 BMP2KQ9NSY1 1161 aaPredicted RBP27.54■■■□□ 2
LDLRAD3-203ENST00000528989 DDX20Q9UHI6 824 aaKnown RBP27.54■■■□□ 2
LDLRAD3-203ENST00000528989 HOOK1Q9UJC3 728 aaKnown RBP27.54■■■□□ 2
LDLRAD3-203ENST00000528989 DBR1Q9UK59 544 aaKnown RBP27.54■■■□□ 2
LDLRAD3-203ENST00000528989 BIN1O00499 593 aa27.53■■■□□ 2
LDLRAD3-203ENST00000528989 GTPBP6O43824 516 aaPredicted RBP27.53■■■□□ 2
LDLRAD3-203ENST00000528989 MYCNP04198 464 aaPredicted RBP27.53■■■□□ 2
LDLRAD3-203ENST00000528989 XRCC6P12956 609 aaKnown RBP eCLIP27.53■■■□□ 2
LDLRAD3-203ENST00000528989 GNASQ5JWF2 1037 aa27.53■■■□□ 2
LDLRAD3-203ENST00000528989 CTU1Q7Z7A3 348 aaKnown RBP27.53■■■□□ 2
LDLRAD3-203ENST00000528989 PPP1R13LQ8WUF5 828 aa27.53■■■□□ 2
LDLRAD3-203ENST00000528989 CCDC34Q96HJ3 373 aa27.53■■■□□ 2
LDLRAD3-203ENST00000528989 C7orf25Q9BPX7 421 aa27.53■■■□□ 2
LDLRAD3-203ENST00000528989 WDR81Q562E7 1941 aa27.53■■■□□ 2
LDLRAD3-203ENST00000528989 H3BRB1 525 aa27.53■■■□□ 2
LDLRAD3-203ENST00000528989 DKC1O60832 514 aaKnown RBP eCLIP27.53■■■□□ 2
LDLRAD3-203ENST00000528989 CPT1AP50416 773 aa27.53■■■□□ 2
LDLRAD3-203ENST00000528989 AMPD3Q01432 767 aa27.53■■■□□ 2
LDLRAD3-203ENST00000528989 PLCB4Q15147 1175 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms