RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 DBR1Q9UK59 544 aaKnown RBP8.86□□□□□ -0.99
SSBP3-211ENST00000528787 PCDHA7Q9UN72 937 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 PHF24Q9UPV7 400 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 TRPC6Q9Y210 931 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.85□□□□□ -0.99
SSBP3-211ENST00000528787 GSTTP1A0A1W2PQM5 241 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 ARHGEF35A5YM69 484 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 POTEMA6NI47 508 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 H0YCG3 227 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 M0QZ92 97 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 KINO60870 393 aaKnown RBP8.85□□□□□ -0.99
SSBP3-211ENST00000528787 CAND2O75155 1236 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 DGAT1O75907 488 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 PARNO95453 639 aaKnown RBP8.85□□□□□ -0.99
SSBP3-211ENST00000528787 PGK1P00558 417 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 OATP04181 439 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 ASGR1P07306 291 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 YWHABP31946 246 aaKnown RBP8.85□□□□□ -0.99
SSBP3-211ENST00000528787 SYKP43405 635 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 ACLYP53396 1101 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 CAP1Q01518 475 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 SPIRE1Q08AE8 756 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 TRIM32Q13049 653 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 NBR1Q14596 966 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 MFSD10Q14728 455 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 ZRSR1Q15695 479 aaKnown RBP8.85□□□□□ -0.99
SSBP3-211ENST00000528787 KCNA10Q16322 511 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 KIAA0753Q2KHM9 967 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 ODR4Q5SWX8 454 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 UTP14CQ5TAP6 766 aaKnown RBP8.85□□□□□ -0.99
SSBP3-211ENST00000528787 C1orf53Q5VUE5 145 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 RESP18Q5W5W9 173 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 TAF2Q6P1X5 1199 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 HTATIP2Q9BUP3 242 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 NIFKQ9BYG3 293 aaKnown RBP8.85□□□□□ -0.99
SSBP3-211ENST00000528787 CSRNP2Q9H175 543 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 C17orf75Q9HAS0 396 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 KCNH3Q9ULD8 1083 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 NOD1Q9Y239 953 aa8.85□□□□□ -0.99
SSBP3-211ENST00000528787 SCN10AQ9Y5Y9 1956 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 CTAGE5O15320 804 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 ASAP2O43150 1006 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 EDIL3O43854 480 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 SLITRK3O94933 977 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 EYA4O95677 639 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 CCNE2O96020 404 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 PSEN2P49810 448 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 POLGP54098 1239 aaPredicted RBP8.84□□□□□ -0.99
SSBP3-211ENST00000528787 PRKCEQ02156 737 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 FAM160A1Q05DH4 1040 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 TBC1D8BQ0IIM8 1120 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 PPFIA1Q13136 1202 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 HSP90AA2PQ14568 343 aaPredicted RBP8.84□□□□□ -0.99
SSBP3-211ENST00000528787 PPP2R5AQ15172 486 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 STXBP4Q6ZWJ1 553 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 SV2BQ7L1I2 683 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 CATSPER3Q86XQ3 398 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 ELOA2Q8IYF1 753 aaPredicted RBP8.84□□□□□ -0.99
SSBP3-211ENST00000528787 TNS4Q8IZW8 715 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 NME8Q8N427 588 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 SYMPKQ92797 1274 aaKnown RBP8.84□□□□□ -0.99
SSBP3-211ENST00000528787 COPS5Q92905 334 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 ZFP91Q96JP5 570 aaPredicted RBP8.84□□□□□ -0.99
SSBP3-211ENST00000528787 DRC1Q96MC2 740 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 TIGD1Q96MW7 591 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 TOX2Q96NM4 488 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 MAP7D2Q96T17 732 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 C16orf70Q9BSU1 422 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 ANP32EQ9BTT0 268 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 TNMDQ9H2S6 317 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 DDX19AQ9NUU7 478 aaKnown RBP8.84□□□□□ -0.99
SSBP3-211ENST00000528787 SEPT9Q9UHD8 586 aaPredicted RBP8.84□□□□□ -0.99
SSBP3-211ENST00000528787 KIAA1024Q9UPX6 916 aa8.84□□□□□ -0.99
SSBP3-211ENST00000528787 FAM237AA0A1B0GTK4 181 aa8.83□□□□□ -1
SSBP3-211ENST00000528787 A0A1W2PQ45 241 aaPredicted RBP8.83□□□□□ -1
SSBP3-211ENST00000528787 A0A1W2PQY0 241 aa8.83□□□□□ -1
SSBP3-211ENST00000528787 C17orf102A2RUQ5 167 aa8.83□□□□□ -1
SSBP3-211ENST00000528787 DCDC2CA8MYV0 355 aa8.83□□□□□ -1
SSBP3-211ENST00000528787 KIF20AO95235 890 aa8.83□□□□□ -1
SSBP3-211ENST00000528787 SMC2O95347 1197 aa8.83□□□□□ -1
SSBP3-211ENST00000528787 KRT18P05783 430 aaKnown RBP8.83□□□□□ -1
SSBP3-211ENST00000528787 CYP4A11Q02928 519 aa8.83□□□□□ -1
SSBP3-211ENST00000528787 BFSP2Q13515 415 aa8.83□□□□□ -1
SSBP3-211ENST00000528787 ITGA7Q13683 1181 aa8.83□□□□□ -1
SSBP3-211ENST00000528787 TFDP1Q14186 410 aa8.83□□□□□ -1
SSBP3-211ENST00000528787 MXD4Q14582 209 aaPredicted RBP8.83□□□□□ -1
SSBP3-211ENST00000528787 PCBP1Q15365 356 aaKnown RBP eCLIP8.83□□□□□ -1
SSBP3-211ENST00000528787 MTFR1Q15390 333 aa8.83□□□□□ -1
SSBP3-211ENST00000528787 XKR9Q5GH70 373 aa8.83□□□□□ -1
SSBP3-211ENST00000528787 GJC2Q5T442 439 aaPredicted RBP8.83□□□□□ -1
SSBP3-211ENST00000528787 CCSAPQ6IQ19 270 aaPredicted RBP8.83□□□□□ -1
SSBP3-211ENST00000528787 CCDC60Q8IWA6 550 aaPredicted RBP8.83□□□□□ -1
SSBP3-211ENST00000528787 FSIP1Q8NA03 581 aa8.83□□□□□ -1
SSBP3-211ENST00000528787 BANK1Q8NDB2 785 aa8.83□□□□□ -1
SSBP3-211ENST00000528787 LARP4BQ92615 738 aaKnown RBP8.83□□□□□ -1
SSBP3-211ENST00000528787 KIFAP3Q92845 792 aa8.83□□□□□ -1
SSBP3-211ENST00000528787 DYDC2Q96IM9 177 aa8.83□□□□□ -1
SSBP3-211ENST00000528787 CEP170P1Q96L14 293 aa8.83□□□□□ -1
SSBP3-211ENST00000528787 INO80BQ9C086 356 aaPredicted RBP8.83□□□□□ -1
SSBP3-211ENST00000528787 C11orf49Q9H6J7 331 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms