RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 CCSAPQ6IQ19 270 aaPredicted RBP6.96□□□□□ -1.3
MACF1-228ENST00000528611 FAM173BQ6P4H8 233 aa6.96□□□□□ -1.3
MACF1-228ENST00000528611 CNNM4Q6P4Q7 775 aa6.96□□□□□ -1.3
MACF1-228ENST00000528611 NFRKBQ6P4R8 1299 aa6.96□□□□□ -1.3
MACF1-228ENST00000528611 EEPD1Q7L9B9 569 aa6.96□□□□□ -1.3
MACF1-228ENST00000528611 OR6J1Q8NGC5 347 aa6.96□□□□□ -1.3
MACF1-228ENST00000528611 MRPS27Q92552 414 aaKnown RBP6.96□□□□□ -1.3
MACF1-228ENST00000528611 KCNN1Q92952 543 aa6.96□□□□□ -1.3
MACF1-228ENST00000528611 CDK5RAP3Q96JB5 506 aa6.96□□□□□ -1.3
MACF1-228ENST00000528611 EIF2AK1Q9BQI3 630 aaKnown RBP6.96□□□□□ -1.3
MACF1-228ENST00000528611 MTG1Q9BT17 334 aaPredicted RBP6.96□□□□□ -1.3
MACF1-228ENST00000528611 ANP32EQ9BTT0 268 aa6.96□□□□□ -1.3
MACF1-228ENST00000528611 CSRNP2Q9H175 543 aa6.96□□□□□ -1.3
MACF1-228ENST00000528611 UNC45AQ9H3U1 944 aa6.96□□□□□ -1.3
MACF1-228ENST00000528611 C17orf75Q9HAS0 396 aa6.96□□□□□ -1.3
MACF1-228ENST00000528611 XPNPEP3Q9NQH7 507 aa6.96□□□□□ -1.3
MACF1-228ENST00000528611 ZNF302Q9NR11 478 aa6.96□□□□□ -1.3
MACF1-228ENST00000528611 PDGFCQ9NRA1 345 aa6.96□□□□□ -1.3
MACF1-228ENST00000528611 DNM3Q9UQ16 869 aa6.96□□□□□ -1.3
MACF1-228ENST00000528611 SAMM50Q9Y512 469 aa6.96□□□□□ -1.3
MACF1-228ENST00000528611 MCM3APO60318 1980 aa6.96□□□□□ -1.3
MACF1-228ENST00000528611 PHLPP2Q6ZVD8 1323 aa6.96□□□□□ -1.3
MACF1-228ENST00000528611 NRCAMQ92823 1304 aa6.96□□□□□ -1.3
MACF1-228ENST00000528611 IGSF9BQ9UPX0 1349 aa6.96□□□□□ -1.3
MACF1-228ENST00000528611 H3BRB1 525 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 HAS3O00219 553 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 MAGEB2O15479 319 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 DYNC1LI2O43237 492 aaPredicted RBP6.95□□□□□ -1.3
MACF1-228ENST00000528611 CAND2O75155 1236 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 DGAT1O75907 488 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 EYA4O95677 639 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 CCNE2O96020 404 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 MARCKSP29966 332 aaPredicted RBP6.95□□□□□ -1.3
MACF1-228ENST00000528611 CNGA1P29973 690 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 HOXC8P31273 242 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 MCM4P33991 863 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 RFC5P40937 340 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 RTP1P59025 263 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 CEBPZQ03701 1054 aaKnown RBP6.95□□□□□ -1.3
MACF1-228ENST00000528611 FAM160A1Q05DH4 1040 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 NBR1Q14596 966 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 PCBP1Q15365 356 aaKnown RBP eCLIP6.95□□□□□ -1.3
MACF1-228ENST00000528611 IL17AQ16552 155 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 GNASQ5JWF2 1037 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 SHC4Q6S5L8 630 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 RPAINQ86UA6 219 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 CABP7Q86V35 215 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 CATSPER3Q86XQ3 398 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 ZNF687Q8N1G0 1237 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 SYT2Q8N9I0 419 aaPredicted RBP6.95□□□□□ -1.3
MACF1-228ENST00000528611 SLC17A8Q8NDX2 589 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 TRPV1Q8NER1 839 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 SNX29Q8TEQ0 813 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 ATP8B4Q8TF62 1192 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 SYMPKQ92797 1274 aaKnown RBP6.95□□□□□ -1.3
MACF1-228ENST00000528611 GLT1D1Q96MS3 346 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 C16orf70Q9BSU1 422 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 RNF208Q9H0X6 261 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 TNMDQ9H2S6 317 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 TUT1Q9H6E5 874 aaKnown RBP6.95□□□□□ -1.3
MACF1-228ENST00000528611 DDX19AQ9NUU7 478 aaKnown RBP6.95□□□□□ -1.3
MACF1-228ENST00000528611 TSKSQ9UJT2 592 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 KCNH3Q9ULD8 1083 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 PHF24Q9UPV7 400 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 MROH7Q68CQ1 1323 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 SYNRGQ9UMZ2 1314 aa6.95□□□□□ -1.3
MACF1-228ENST00000528611 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.94□□□□□ -1.3
MACF1-228ENST00000528611 KBTBD13C9JR72 458 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 BACH1O14867 736 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 ASAP2O43150 1006 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 LETM1O95202 739 aaPredicted RBP6.94□□□□□ -1.3
MACF1-228ENST00000528611 PARNO95453 639 aaKnown RBP6.94□□□□□ -1.3
MACF1-228ENST00000528611 OATP04181 439 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 LGALS2P05162 132 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 C6orf222P0C671 652 aaPredicted RBP6.94□□□□□ -1.3
MACF1-228ENST00000528611 SLFN14P0C7P3 912 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 SPATA31C1P0DKV0 1188 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 CCL5P13501 91 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 PRKCSHP14314 528 aaPredicted RBP6.94□□□□□ -1.3
MACF1-228ENST00000528611 GUCY2CP25092 1073 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 CCND3P30281 292 aaPredicted RBP6.94□□□□□ -1.3
MACF1-228ENST00000528611 YWHABP31946 246 aaKnown RBP6.94□□□□□ -1.3
MACF1-228ENST00000528611 CCT6AP40227 531 aaKnown RBP6.94□□□□□ -1.3
MACF1-228ENST00000528611 SYKP43405 635 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 PURAQ00577 322 aaKnown RBP6.94□□□□□ -1.3
MACF1-228ENST00000528611 POU5F1BQ06416 359 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 LRRC41Q15345 812 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 TARBP2Q15633 366 aaKnown RBP6.94□□□□□ -1.3
MACF1-228ENST00000528611 TMEM119Q4V9L6 283 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 PRAMEF19Q5SWL8 479 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 FOXD4L5Q5VV16 416 aaPredicted RBP6.94□□□□□ -1.3
MACF1-228ENST00000528611 RRAGBQ5VZM2 374 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 NCAPH2Q6IBW4 605 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 SWSAP1Q6NVH7 229 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 PDXDC2PQ6P474 469 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 SV2BQ7L1I2 683 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 CEP57L1Q8IYX8 460 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 NME8Q8N427 588 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 SLC43A3Q8NBI5 491 aa6.94□□□□□ -1.3
MACF1-228ENST00000528611 RETREG2Q8NC44 543 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms