RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 DNAJB3Q8WWF6 145 aa10.28□□□□□ -0.76
CMTM1-210ENST00000528441 WNT8BQ93098 351 aa10.28□□□□□ -0.76
CMTM1-210ENST00000528441 SCLT1Q96NL6 688 aa10.28□□□□□ -0.76
CMTM1-210ENST00000528441 AIFM3Q96NN9 605 aa10.28□□□□□ -0.76
CMTM1-210ENST00000528441 TTYH1Q9H313 450 aaPredicted RBP10.28□□□□□ -0.76
CMTM1-210ENST00000528441 TBC1D22BQ9NU19 505 aa10.28□□□□□ -0.76
CMTM1-210ENST00000528441 TPCN1Q9ULQ1 816 aa10.28□□□□□ -0.76
CMTM1-210ENST00000528441 PCDHA11Q9Y5I1 949 aa10.28□□□□□ -0.76
CMTM1-210ENST00000528441 STK24Q9Y6E0 443 aa10.28□□□□□ -0.76
CMTM1-210ENST00000528441 ABHD14A-ACY1A0A1B0GW23 586 aa10.27□□□□□ -0.77
CMTM1-210ENST00000528441 MEIS1O00470 390 aa10.27□□□□□ -0.77
CMTM1-210ENST00000528441 GTPBP6O43824 516 aaPredicted RBP10.27□□□□□ -0.77
CMTM1-210ENST00000528441 PFKFB2O60825 505 aa10.27□□□□□ -0.77
CMTM1-210ENST00000528441 NBNO60934 754 aa10.27□□□□□ -0.77
CMTM1-210ENST00000528441 CAND2O75155 1236 aa10.27□□□□□ -0.77
CMTM1-210ENST00000528441 GHRP10912 638 aa10.27□□□□□ -0.77
CMTM1-210ENST00000528441 INSRRP14616 1297 aa10.27□□□□□ -0.77
CMTM1-210ENST00000528441 EVCP57679 992 aa10.27□□□□□ -0.77
CMTM1-210ENST00000528441 WDR5P61964 334 aaKnown RBP10.27□□□□□ -0.77
CMTM1-210ENST00000528441 HIC1Q14526 733 aa10.27□□□□□ -0.77
CMTM1-210ENST00000528441 IER5Q5VY09 327 aa10.27□□□□□ -0.77
CMTM1-210ENST00000528441 GALNT17Q6IS24 598 aa10.27□□□□□ -0.77
CMTM1-210ENST00000528441 SWSAP1Q6NVH7 229 aa10.27□□□□□ -0.77
CMTM1-210ENST00000528441 KRT25Q7Z3Z0 450 aa10.27□□□□□ -0.77
CMTM1-210ENST00000528441 HERC6Q8IVU3 1022 aa10.27□□□□□ -0.77
CMTM1-210ENST00000528441 METTL13Q8N6R0 699 aa10.27□□□□□ -0.77
CMTM1-210ENST00000528441 IL27Q8NEV9 243 aa10.27□□□□□ -0.77
CMTM1-210ENST00000528441 DBF4BQ8NFT6 615 aa10.27□□□□□ -0.77
CMTM1-210ENST00000528441 PHOSPHO2Q8TCD6 241 aa10.27□□□□□ -0.77
CMTM1-210ENST00000528441 ARNTL2Q8WYA1 636 aa10.27□□□□□ -0.77
CMTM1-210ENST00000528441 PPP1R16BQ96T49 567 aa10.27□□□□□ -0.77
CMTM1-210ENST00000528441 IFIH1Q9BYX4 1025 aaKnown RBP10.27□□□□□ -0.77
CMTM1-210ENST00000528441 GABBR1Q9UBS5 961 aa10.27□□□□□ -0.77
CMTM1-210ENST00000528441 MTUS1Q9ULD2 1270 aa10.27□□□□□ -0.77
CMTM1-210ENST00000528441 YBX2Q9Y2T7 364 aaKnown RBP10.27□□□□□ -0.77
CMTM1-210ENST00000528441 MYH9P35579 1960 aaKnown RBP10.26□□□□□ -0.77
CMTM1-210ENST00000528441 WDR64B1ANS9 1081 aa10.26□□□□□ -0.77
CMTM1-210ENST00000528441 HBP1O60381 514 aa10.26□□□□□ -0.77
CMTM1-210ENST00000528441 RPLP2P05387 115 aaKnown RBP10.26□□□□□ -0.77
CMTM1-210ENST00000528441 CYP3A4P08684 503 aa10.26□□□□□ -0.77
CMTM1-210ENST00000528441 KRT2P35908 639 aa10.26□□□□□ -0.77
CMTM1-210ENST00000528441 SLC26A2P50443 739 aa10.26□□□□□ -0.77
CMTM1-210ENST00000528441 DEFB103AP81534 67 aa10.26□□□□□ -0.77
CMTM1-210ENST00000528441 PLCB4Q15147 1175 aa10.26□□□□□ -0.77
CMTM1-210ENST00000528441 SAFBQ15424 915 aaKnown RBP eCLIP10.26□□□□□ -0.77
CMTM1-210ENST00000528441 CCDC85BQ15834 202 aaPredicted RBP10.26□□□□□ -0.77
CMTM1-210ENST00000528441 INF2Q27J81 1249 aa10.26□□□□□ -0.77
CMTM1-210ENST00000528441 RASIP1Q5U651 963 aa10.26□□□□□ -0.77
CMTM1-210ENST00000528441 ZNF746Q6NUN9 644 aaPredicted RBP10.26□□□□□ -0.77
CMTM1-210ENST00000528441 RUFY4Q6ZNE9 571 aa10.26□□□□□ -0.77
CMTM1-210ENST00000528441 PIK3AP1Q6ZUJ8 805 aa10.26□□□□□ -0.77
CMTM1-210ENST00000528441 PLPPR4Q7Z2D5 763 aa10.26□□□□□ -0.77
CMTM1-210ENST00000528441 MIER3Q7Z3K6 550 aa10.26□□□□□ -0.77
CMTM1-210ENST00000528441 TMCO2Q7Z6W1 182 aaPredicted RBP10.26□□□□□ -0.77
CMTM1-210ENST00000528441 SMAP1Q8IYB5 467 aaPredicted RBP10.26□□□□□ -0.77
CMTM1-210ENST00000528441 FAM184AQ8NB25 1140 aa10.26□□□□□ -0.77
CMTM1-210ENST00000528441 TRAPPC12Q8WVT3 735 aa10.26□□□□□ -0.77
CMTM1-210ENST00000528441 ZBTB10Q96DT7 871 aa10.26□□□□□ -0.77
CMTM1-210ENST00000528441 YME1L1Q96TA2 773 aa10.26□□□□□ -0.77
CMTM1-210ENST00000528441 DDX25Q9UHL0 483 aaKnown RBP10.26□□□□□ -0.77
CMTM1-210ENST00000528441 CEP131Q9UPN4 1083 aa10.26□□□□□ -0.77
CMTM1-210ENST00000528441 PCDHA10Q9Y5I2 948 aa10.26□□□□□ -0.77
CMTM1-210ENST00000528441 TRPV2Q9Y5S1 764 aa10.26□□□□□ -0.77
CMTM1-210ENST00000528441 CDY2AQ9Y6F7 541 aa10.26□□□□□ -0.77
CMTM1-210ENST00000528441 STK36Q9NRP7 1315 aa10.26□□□□□ -0.77
CMTM1-210ENST00000528441 RANBP2P49792 3224 aaKnown RBP10.26□□□□□ -0.77
CMTM1-210ENST00000528441 TET1Q8NFU7 2136 aa10.25□□□□□ -0.77
CMTM1-210ENST00000528441 MYO9BQ13459 2157 aa10.25□□□□□ -0.77
CMTM1-210ENST00000528441 ADAMTS3O15072 1205 aa10.25□□□□□ -0.77
CMTM1-210ENST00000528441 CCNT1O60563 726 aaKnown RBP10.25□□□□□ -0.77
CMTM1-210ENST00000528441 TDP2O95551 362 aa10.25□□□□□ -0.77
CMTM1-210ENST00000528441 USP11P51784 963 aa10.25□□□□□ -0.77
CMTM1-210ENST00000528441 JAK3P52333 1124 aa10.25□□□□□ -0.77
CMTM1-210ENST00000528441 MRPS6P82932 125 aaKnown RBP10.25□□□□□ -0.77
CMTM1-210ENST00000528441 RBL2Q08999 1139 aa10.25□□□□□ -0.77
CMTM1-210ENST00000528441 TRIM71Q2Q1W2 868 aaKnown RBP10.25□□□□□ -0.77
CMTM1-210ENST00000528441 NEK8Q86SG6 692 aa10.25□□□□□ -0.77
CMTM1-210ENST00000528441 CCDC60Q8IWA6 550 aaPredicted RBP10.25□□□□□ -0.77
CMTM1-210ENST00000528441 CCDC83Q8IWF9 413 aa10.25□□□□□ -0.77
CMTM1-210ENST00000528441 ATP8B4Q8TF62 1192 aa10.25□□□□□ -0.77
CMTM1-210ENST00000528441 APBB2Q92870 758 aa10.25□□□□□ -0.77
CMTM1-210ENST00000528441 GTF3C6Q969F1 213 aa10.25□□□□□ -0.77
CMTM1-210ENST00000528441 FAM167AQ96KS9 214 aa10.25□□□□□ -0.77
CMTM1-210ENST00000528441 CCDC43Q96MW1 224 aaKnown RBP10.25□□□□□ -0.77
CMTM1-210ENST00000528441 CTAGE1Q96RT6 745 aa10.25□□□□□ -0.77
CMTM1-210ENST00000528441 MAP7D2Q96T17 732 aa10.25□□□□□ -0.77
CMTM1-210ENST00000528441 NAP1L4Q99733 375 aaKnown RBP10.25□□□□□ -0.77
CMTM1-210ENST00000528441 DISC1Q9NRI5 854 aa10.25□□□□□ -0.77
CMTM1-210ENST00000528441 SEPT9Q9UHD8 586 aaPredicted RBP10.25□□□□□ -0.77
CMTM1-210ENST00000528441 AKT3Q9Y243 479 aa10.25□□□□□ -0.77
CMTM1-210ENST00000528441 IGLV3-22A0A075B6J6 115 aa10.24□□□□□ -0.77
CMTM1-210ENST00000528441 MSH4O15457 936 aa10.24□□□□□ -0.77
CMTM1-210ENST00000528441 BAG4O95429 457 aaKnown RBP10.24□□□□□ -0.77
CMTM1-210ENST00000528441 LARGE1O95461 756 aa10.24□□□□□ -0.77
CMTM1-210ENST00000528441 CCNE2O96020 404 aa10.24□□□□□ -0.77
CMTM1-210ENST00000528441 CXCL10P02778 98 aa10.24□□□□□ -0.77
CMTM1-210ENST00000528441 ATP2B1P20020 1258 aa10.24□□□□□ -0.77
CMTM1-210ENST00000528441 KLRC1P26715 233 aa10.24□□□□□ -0.77
CMTM1-210ENST00000528441 TMOD1P28289 359 aa10.24□□□□□ -0.77
CMTM1-210ENST00000528441 SFNP31947 248 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms