RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 DESI2Q9BSY9 194 aa16.28■□□□□ 0.2
ECHDC1-220ENST00000528402 TEX13BQ9BXU2 312 aa16.28■□□□□ 0.2
ECHDC1-220ENST00000528402 RLFQ13129 1914 aa16.28■□□□□ 0.2
ECHDC1-220ENST00000528402 PPP1R12BO60237 982 aaPredicted RBP16.28■□□□□ 0.2
ECHDC1-220ENST00000528402 USP2O75604 605 aaPredicted RBP16.28■□□□□ 0.2
ECHDC1-220ENST00000528402 GCNT3O95395 438 aa16.28■□□□□ 0.2
ECHDC1-220ENST00000528402 NR2F2P24468 414 aa16.28■□□□□ 0.2
ECHDC1-220ENST00000528402 HIRAP54198 1017 aaPredicted RBP16.28■□□□□ 0.2
ECHDC1-220ENST00000528402 HMGCS2P54868 508 aa16.28■□□□□ 0.2
ECHDC1-220ENST00000528402 MRPS9P82933 396 aaKnown RBP16.28■□□□□ 0.2
ECHDC1-220ENST00000528402 RAD51AP2Q09MP3 1159 aa16.28■□□□□ 0.2
ECHDC1-220ENST00000528402 WDR59Q6PJI9 974 aa16.28■□□□□ 0.2
ECHDC1-220ENST00000528402 VSIG10LQ86VR7 867 aa16.28■□□□□ 0.2
ECHDC1-220ENST00000528402 C4orf19Q8IY42 314 aa16.28■□□□□ 0.2
ECHDC1-220ENST00000528402 EHBP1Q8NDI1 1231 aa16.28■□□□□ 0.2
ECHDC1-220ENST00000528402 PIGOQ8TEQ8 1089 aa16.28■□□□□ 0.2
ECHDC1-220ENST00000528402 ANKRD7Q92527 254 aa16.28■□□□□ 0.2
ECHDC1-220ENST00000528402 MKNK1Q9BUB5 465 aa16.28■□□□□ 0.2
ECHDC1-220ENST00000528402 MMRN2Q9H8L6 949 aa16.28■□□□□ 0.2
ECHDC1-220ENST00000528402 AGPAT5Q9NUQ2 364 aa16.28■□□□□ 0.2
ECHDC1-220ENST00000528402 CGNQ9P2M7 1197 aaKnown RBP16.28■□□□□ 0.2
ECHDC1-220ENST00000528402 RRP9O43818 475 aaKnown RBP16.27■□□□□ 0.19
ECHDC1-220ENST00000528402 URI1O94763 535 aaPredicted RBP16.27■□□□□ 0.19
ECHDC1-220ENST00000528402 EPB41P11171 864 aaKnown RBP16.27■□□□□ 0.19
ECHDC1-220ENST00000528402 SNRPFP62306 86 aaKnown RBP16.27■□□□□ 0.19
ECHDC1-220ENST00000528402 SNRNP48Q6IEG0 339 aaKnown RBP16.27■□□□□ 0.19
ECHDC1-220ENST00000528402 ZNF746Q6NUN9 644 aaPredicted RBP16.27■□□□□ 0.19
ECHDC1-220ENST00000528402 NSMFQ6X4W1 530 aa16.27■□□□□ 0.19
ECHDC1-220ENST00000528402 ZNF720Q7Z2F6 126 aa16.27■□□□□ 0.19
ECHDC1-220ENST00000528402 CHST13Q8NET6 341 aa16.27■□□□□ 0.19
ECHDC1-220ENST00000528402 EEF2KMTQ96G04 330 aa16.27■□□□□ 0.19
ECHDC1-220ENST00000528402 CHP1Q99653 195 aa16.27■□□□□ 0.19
ECHDC1-220ENST00000528402 ACAD9Q9H845 621 aa16.27■□□□□ 0.19
ECHDC1-220ENST00000528402 HOMER2Q9NSB8 354 aa16.27■□□□□ 0.19
ECHDC1-220ENST00000528402 ANKEF1Q9NU02 776 aa16.27■□□□□ 0.19
ECHDC1-220ENST00000528402 CEP72Q9P209 647 aa16.27■□□□□ 0.19
ECHDC1-220ENST00000528402 LARSQ9P2J5 1176 aaKnown RBP16.27■□□□□ 0.19
ECHDC1-220ENST00000528402 ARMCX3Q9UH62 379 aaPredicted RBP16.27■□□□□ 0.19
ECHDC1-220ENST00000528402 POLR2AP24928 1970 aaKnown RBP16.27■□□□□ 0.19
ECHDC1-220ENST00000528402 MYH11P35749 1972 aa16.26■□□□□ 0.19
ECHDC1-220ENST00000528402 WDR64B1ANS9 1081 aa16.26■□□□□ 0.19
ECHDC1-220ENST00000528402 NR3C2P08235 984 aa16.26■□□□□ 0.19
ECHDC1-220ENST00000528402 EIF2AK2P19525 551 aaKnown RBP16.26■□□□□ 0.19
ECHDC1-220ENST00000528402 PSMC5P62195 406 aa16.26■□□□□ 0.19
ECHDC1-220ENST00000528402 BAATQ14032 418 aaPredicted RBP16.26■□□□□ 0.19
ECHDC1-220ENST00000528402 CACNA2D4Q7Z3S7 1137 aa16.26■□□□□ 0.19
ECHDC1-220ENST00000528402 FAM178BQ8IXR5 827 aa16.26■□□□□ 0.19
ECHDC1-220ENST00000528402 TMEM174Q8WUU8 243 aa16.26■□□□□ 0.19
ECHDC1-220ENST00000528402 CCDC42Q96M95 316 aa16.26■□□□□ 0.19
ECHDC1-220ENST00000528402 IWS1Q96ST2 819 aa16.26■□□□□ 0.19
ECHDC1-220ENST00000528402 FGFBP2Q9BYJ0 223 aa16.26■□□□□ 0.19
ECHDC1-220ENST00000528402 TSGA10Q9BZW7 698 aa16.26■□□□□ 0.19
ECHDC1-220ENST00000528402 NHEJ1Q9H9Q4 299 aaPredicted RBP16.26■□□□□ 0.19
ECHDC1-220ENST00000528402 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.26■□□□□ 0.19
ECHDC1-220ENST00000528402 FBXO40Q9UH90 709 aa16.26■□□□□ 0.19
ECHDC1-220ENST00000528402 ZNF214Q9UL59 606 aaPredicted RBP16.26■□□□□ 0.19
ECHDC1-220ENST00000528402 DAAM1Q9Y4D1 1078 aa16.26■□□□□ 0.19
ECHDC1-220ENST00000528402 SSU72P8A0A1W2PR75 194 aa16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 KRT86O43790 486 aa16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 PRPF6O94906 941 aaKnown RBP16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 NR3C1P04150 777 aa16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 MYBP10242 640 aa16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 MYCLP12524 364 aaPredicted RBP16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 IREB2P48200 963 aaKnown RBP16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 ITGB3BPQ13352 177 aaPredicted RBP16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 SPA17Q15506 151 aa16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 PADI6Q6TGC4 694 aa16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 SLC30A10Q6XR72 485 aa16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 HS2ST1Q7LGA3 356 aa16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 SULF1Q8IWU6 871 aa16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 SMAP1Q8IYB5 467 aaPredicted RBP16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 IL31RAQ8NI17 732 aa16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 PDCL3Q9H2J4 239 aa16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 TMEM206Q9H813 350 aa16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 LZTFL1Q9NQ48 299 aa16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 PLCB1Q9NQ66 1216 aa16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 KCNG1Q9UIX4 513 aa16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 ZNF215Q9UL58 517 aaPredicted RBP16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 MYO6Q9UM54 1294 aa16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 SAMM50Q9Y512 469 aa16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 CSADQ9Y600 493 aa16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 NFASCO94856 1347 aa16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 COL11A1P12107 1806 aaPredicted RBP16.25■□□□□ 0.19
ECHDC1-220ENST00000528402 GTPBP10A4D1E9 387 aaKnown RBP16.24■□□□□ 0.19
ECHDC1-220ENST00000528402 CTAGE9A4FU28 777 aa16.24■□□□□ 0.19
ECHDC1-220ENST00000528402 RSPH10B2B2RC85 870 aa16.24■□□□□ 0.19
ECHDC1-220ENST00000528402 AFPP02771 609 aaKnown RBP16.24■□□□□ 0.19
ECHDC1-220ENST00000528402 RSPH10BP0C881 870 aa16.24■□□□□ 0.19
ECHDC1-220ENST00000528402 XRCC5P13010 732 aaKnown RBP16.24■□□□□ 0.19
ECHDC1-220ENST00000528402 HOXD13P35453 343 aa16.24■□□□□ 0.19
ECHDC1-220ENST00000528402 CASP5P51878 434 aa16.24■□□□□ 0.19
ECHDC1-220ENST00000528402 KCNMA1Q12791 1236 aa16.24■□□□□ 0.19
ECHDC1-220ENST00000528402 KCNH2Q12809 1159 aa16.24■□□□□ 0.19
ECHDC1-220ENST00000528402 ODR4Q5SWX8 454 aa16.24■□□□□ 0.19
ECHDC1-220ENST00000528402 PRAMEF18Q5VWM3 479 aa16.24■□□□□ 0.19
ECHDC1-220ENST00000528402 SLC9A9Q8IVB4 645 aa16.24■□□□□ 0.19
ECHDC1-220ENST00000528402 ACRBPQ8NEB7 543 aa16.24■□□□□ 0.19
ECHDC1-220ENST00000528402 MNS1Q8NEH6 495 aa16.24■□□□□ 0.19
ECHDC1-220ENST00000528402 DNERQ8NFT8 737 aa16.24■□□□□ 0.19
ECHDC1-220ENST00000528402 INPP4AQ96PE3 977 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms