RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 SLC18A3Q16572 532 aa16.87■□□□□ 0.29
USH1C-207ENST00000527720 MAP9Q49MG5 647 aa16.87■□□□□ 0.29
USH1C-207ENST00000527720 ZNF771Q7L3S4 317 aaPredicted RBP16.87■□□□□ 0.29
USH1C-207ENST00000527720 RUBCNQ92622 972 aa16.87■□□□□ 0.29
USH1C-207ENST00000527720 CAPZA3Q96KX2 299 aa16.87■□□□□ 0.29
USH1C-207ENST00000527720 NOX5Q96PH1 765 aa16.87■□□□□ 0.29
USH1C-207ENST00000527720 MLXIPQ9HAP2 919 aa16.87■□□□□ 0.29
USH1C-207ENST00000527720 FBXL5Q9UKA1 691 aa16.87■□□□□ 0.29
USH1C-207ENST00000527720 HYOU1Q9Y4L1 999 aa16.87■□□□□ 0.29
USH1C-207ENST00000527720 ASTN1O14525 1302 aa16.87■□□□□ 0.29
USH1C-207ENST00000527720 GAS7O60861 476 aa16.86■□□□□ 0.29
USH1C-207ENST00000527720 GCNT3O95395 438 aa16.86■□□□□ 0.29
USH1C-207ENST00000527720 NR3C1P04150 777 aa16.86■□□□□ 0.29
USH1C-207ENST00000527720 EPB41P11171 864 aaKnown RBP16.86■□□□□ 0.29
USH1C-207ENST00000527720 OAS2P29728 719 aaKnown RBP16.86■□□□□ 0.29
USH1C-207ENST00000527720 C1orf186Q6ZWK4 172 aa16.86■□□□□ 0.29
USH1C-207ENST00000527720 TBC1D5Q92609 795 aa16.86■□□□□ 0.29
USH1C-207ENST00000527720 CRACR2AQ9BSW2 395 aa16.86■□□□□ 0.29
USH1C-207ENST00000527720 VEZTQ9HBM0 779 aa16.86■□□□□ 0.29
USH1C-207ENST00000527720 BZW2Q9Y6E2 419 aaKnown RBP16.86■□□□□ 0.29
USH1C-207ENST00000527720 FRMPD4Q14CM0 1322 aa16.86■□□□□ 0.29
USH1C-207ENST00000527720 GTPBP10A4D1E9 387 aaKnown RBP16.86■□□□□ 0.29
USH1C-207ENST00000527720 RSPH10B2B2RC85 870 aa16.86■□□□□ 0.29
USH1C-207ENST00000527720 FAM13AO94988 1023 aa16.86■□□□□ 0.29
USH1C-207ENST00000527720 ASNSP08243 561 aa16.86■□□□□ 0.29
USH1C-207ENST00000527720 RSPH10BP0C881 870 aa16.86■□□□□ 0.29
USH1C-207ENST00000527720 ASIC2Q16515 512 aa16.86■□□□□ 0.29
USH1C-207ENST00000527720 C10orf76Q5T2E6 689 aa16.86■□□□□ 0.29
USH1C-207ENST00000527720 CCDC70Q6NSX1 233 aa16.86■□□□□ 0.29
USH1C-207ENST00000527720 CREG2Q8IUH2 290 aa16.86■□□□□ 0.29
USH1C-207ENST00000527720 DYDC2Q96IM9 177 aa16.86■□□□□ 0.29
USH1C-207ENST00000527720 NACC1Q96RE7 527 aa16.86■□□□□ 0.29
USH1C-207ENST00000527720 ZNRF3Q9ULT6 936 aa16.86■□□□□ 0.29
USH1C-207ENST00000527720 RASSF7Q02833 373 aa16.85■□□□□ 0.29
USH1C-207ENST00000527720 RAPGEF1Q13905 1077 aa16.85■□□□□ 0.29
USH1C-207ENST00000527720 CTTNQ14247 550 aaKnown RBP16.85■□□□□ 0.29
USH1C-207ENST00000527720 EPHA7Q15375 998 aa16.85■□□□□ 0.29
USH1C-207ENST00000527720 STXBP4Q6ZWJ1 553 aa16.85■□□□□ 0.29
USH1C-207ENST00000527720 LDHDQ86WU2 507 aa16.85■□□□□ 0.29
USH1C-207ENST00000527720 TPH2Q8IWU9 490 aa16.85■□□□□ 0.29
USH1C-207ENST00000527720 MMGT1Q8N4V1 131 aa16.85■□□□□ 0.29
USH1C-207ENST00000527720 NEK9Q8TD19 979 aa16.85■□□□□ 0.29
USH1C-207ENST00000527720 ZBED3Q96IU2 234 aaPredicted RBP16.85■□□□□ 0.29
USH1C-207ENST00000527720 ACBD3Q9H3P7 528 aa16.85■□□□□ 0.29
USH1C-207ENST00000527720 ZNF277Q9NRM2 450 aaPredicted RBP16.85■□□□□ 0.29
USH1C-207ENST00000527720 ODF2LQ9ULJ1 636 aa16.85■□□□□ 0.29
USH1C-207ENST00000527720 ANXA13P27216 316 aa16.85■□□□□ 0.29
USH1C-207ENST00000527720 KLHL30Q0D2K2 578 aa16.85■□□□□ 0.29
USH1C-207ENST00000527720 EXOC3L4Q17RC7 722 aa16.85■□□□□ 0.29
USH1C-207ENST00000527720 DPY19L2P1Q6NXN4 242 aa16.85■□□□□ 0.29
USH1C-207ENST00000527720 B3GNT9Q6UX72 402 aa16.85■□□□□ 0.29
USH1C-207ENST00000527720 OSBPL9Q96SU4 736 aa16.85■□□□□ 0.29
USH1C-207ENST00000527720 ZNF577Q9BSK1 485 aa16.85■□□□□ 0.29
USH1C-207ENST00000527720 TEKT3Q9BXF9 490 aa16.85■□□□□ 0.29
USH1C-207ENST00000527720 TMEM39BQ9GZU3 492 aa16.85■□□□□ 0.29
USH1C-207ENST00000527720 PARVGQ9HBI0 331 aa16.85■□□□□ 0.29
USH1C-207ENST00000527720 PGAP2Q9UHJ9 254 aa16.85■□□□□ 0.29
USH1C-207ENST00000527720 ATP8B3O60423 1300 aa16.84■□□□□ 0.29
USH1C-207ENST00000527720 PDE2AO00408 941 aaPredicted RBP16.84■□□□□ 0.29
USH1C-207ENST00000527720 ZNF185O15231 689 aa16.84■□□□□ 0.29
USH1C-207ENST00000527720 AKAP3O75969 853 aa16.84■□□□□ 0.29
USH1C-207ENST00000527720 BCRP11274 1271 aa16.84■□□□□ 0.29
USH1C-207ENST00000527720 PTGER2P43116 358 aa16.84■□□□□ 0.29
USH1C-207ENST00000527720 HSD17B4P51659 736 aa16.84■□□□□ 0.29
USH1C-207ENST00000527720 ZNF131P52739 623 aa16.84■□□□□ 0.29
USH1C-207ENST00000527720 EN1Q05925 392 aaPredicted RBP16.84■□□□□ 0.29
USH1C-207ENST00000527720 CASP8Q14790 479 aa16.84■□□□□ 0.29
USH1C-207ENST00000527720 NIM1KQ8IY84 436 aa16.84■□□□□ 0.29
USH1C-207ENST00000527720 RIT2Q99578 217 aa16.84■□□□□ 0.29
USH1C-207ENST00000527720 MKNK1Q9BUB5 465 aa16.84■□□□□ 0.29
USH1C-207ENST00000527720 VIPAS39Q9H9C1 493 aa16.84■□□□□ 0.29
USH1C-207ENST00000527720 RNF14Q9UBS8 474 aa16.84■□□□□ 0.29
USH1C-207ENST00000527720 ZBTB12Q9Y330 459 aaPredicted RBP16.84■□□□□ 0.29
USH1C-207ENST00000527720 FER1L6Q2WGJ9 1857 aa16.84■□□□□ 0.29
USH1C-207ENST00000527720 SHTN1A0MZ66 631 aa16.84■□□□□ 0.29
USH1C-207ENST00000527720 BTNL10A8MVZ5 291 aa16.84■□□□□ 0.29
USH1C-207ENST00000527720 UCHL3P15374 230 aa16.84■□□□□ 0.29
USH1C-207ENST00000527720 NAB2Q15742 525 aa16.84■□□□□ 0.29
USH1C-207ENST00000527720 KLHDC7AQ5VTJ3 777 aa16.84■□□□□ 0.29
USH1C-207ENST00000527720 GBP6Q6ZN66 633 aa16.84■□□□□ 0.29
USH1C-207ENST00000527720 MYCT1Q8N699 235 aa16.84■□□□□ 0.29
USH1C-207ENST00000527720 PIGOQ8TEQ8 1089 aa16.84■□□□□ 0.29
USH1C-207ENST00000527720 SALL4Q9UJQ4 1053 aa16.84■□□□□ 0.29
USH1C-207ENST00000527720 PPP1R12BO60237 982 aaPredicted RBP16.83■□□□□ 0.28
USH1C-207ENST00000527720 ICAM1P05362 532 aa16.83■□□□□ 0.28
USH1C-207ENST00000527720 PON1P27169 355 aa16.83■□□□□ 0.28
USH1C-207ENST00000527720 NIPA1Q7RTP0 329 aa16.83■□□□□ 0.28
USH1C-207ENST00000527720 FAM133AQ8N9E0 248 aa16.83■□□□□ 0.28
USH1C-207ENST00000527720 SLC35C1Q96A29 364 aa16.83■□□□□ 0.28
USH1C-207ENST00000527720 MXRA8Q9BRK3 442 aa16.83■□□□□ 0.28
USH1C-207ENST00000527720 TGFB1I1O43294 461 aa16.82■□□□□ 0.28
USH1C-207ENST00000527720 CHMP2AO43633 222 aa16.82■□□□□ 0.28
USH1C-207ENST00000527720 KCNA3P22001 575 aa16.82■□□□□ 0.28
USH1C-207ENST00000527720 PSMC2P35998 433 aaKnown RBP16.82■□□□□ 0.28
USH1C-207ENST00000527720 PRKCIP41743 596 aa16.82■□□□□ 0.28
USH1C-207ENST00000527720 GHRHRQ02643 423 aa16.82■□□□□ 0.28
USH1C-207ENST00000527720 BORCS6Q96GS4 357 aa16.82■□□□□ 0.28
USH1C-207ENST00000527720 SPAG5Q96R06 1193 aa16.82■□□□□ 0.28
USH1C-207ENST00000527720 UNC45AQ9H3U1 944 aa16.82■□□□□ 0.28
USH1C-207ENST00000527720 ZMYM2Q9UBW7 1377 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms