RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 ADALQ6DHV7 355 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 CLEC17AQ6ZS10 378 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 TNS4Q8IZW8 715 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 PDILTQ8N807 584 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 ZNF579Q8NAF0 562 aaKnown RBP15.36■□□□□ 0.05
CD44-224ENST00000526669 AFAP1L1Q8TED9 768 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 LRRC15Q8TF66 581 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 ATP6V0A1Q93050 837 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 CALML4Q96GE6 196 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 HSD17B14Q9BPX1 270 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 SH2D3AQ9BRG2 576 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 TSEN34Q9BSV6 310 aaKnown RBP15.36■□□□□ 0.05
CD44-224ENST00000526669 RNPEPQ9H4A4 650 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 GOLPH3LQ9H4A5 285 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 TUT1Q9H6E5 874 aaKnown RBP15.36■□□□□ 0.05
CD44-224ENST00000526669 TUFT1Q9NNX1 390 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 DDX19AQ9NUU7 478 aaKnown RBP15.36■□□□□ 0.05
CD44-224ENST00000526669 SEPT9Q9UHD8 586 aaPredicted RBP15.36■□□□□ 0.05
CD44-224ENST00000526669 ZNF215Q9UL58 517 aaPredicted RBP15.36■□□□□ 0.05
CD44-224ENST00000526669 KIAA1024Q9UPX6 916 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 TRPC6Q9Y210 931 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 MAFBQ9Y5Q3 323 aaPredicted RBP15.36■□□□□ 0.05
CD44-224ENST00000526669 SIP14410 1827 aa15.36■□□□□ 0.05
CD44-224ENST00000526669 MOXD2PA6NHM9 499 aa15.35■□□□□ 0.05
CD44-224ENST00000526669 DDX11L8A8MPP1 907 aa15.35■□□□□ 0.05
CD44-224ENST00000526669 E9PMD0 336 aa15.35■□□□□ 0.05
CD44-224ENST00000526669 KPNA6O60684 536 aa15.35■□□□□ 0.05
CD44-224ENST00000526669 F2P00734 622 aa15.35■□□□□ 0.05
CD44-224ENST00000526669 OATP04181 439 aa15.35■□□□□ 0.05
CD44-224ENST00000526669 PLCG1P19174 1290 aa15.35■□□□□ 0.05
CD44-224ENST00000526669 SOX10P56693 466 aa15.35■□□□□ 0.05
CD44-224ENST00000526669 NBPF20Q3BBV1 942 aa15.35■□□□□ 0.05
CD44-224ENST00000526669 PLPPR4Q7Z2D5 763 aa15.35■□□□□ 0.05
CD44-224ENST00000526669 KCNK18Q7Z418 384 aa15.35■□□□□ 0.05
CD44-224ENST00000526669 TMEM87AQ8NBN3 555 aa15.35■□□□□ 0.05
CD44-224ENST00000526669 PIGOQ8TEQ8 1089 aa15.35■□□□□ 0.05
CD44-224ENST00000526669 CCSER1Q9C0I3 900 aa15.35■□□□□ 0.05
CD44-224ENST00000526669 ZSWIM4Q9H7M6 989 aa15.35■□□□□ 0.05
CD44-224ENST00000526669 FAM13BQ9NYF5 915 aa15.35■□□□□ 0.05
CD44-224ENST00000526669 ERAP1Q9NZ08 941 aa15.35■□□□□ 0.05
CD44-224ENST00000526669 PHF24Q9UPV7 400 aa15.35■□□□□ 0.05
CD44-224ENST00000526669 KDM3AQ9Y4C1 1321 aa15.35■□□□□ 0.05
CD44-224ENST00000526669 SCN5AQ14524 2016 aa15.34■□□□□ 0.05
CD44-224ENST00000526669 CCDC85CA6NKD9 419 aa15.34■□□□□ 0.05
CD44-224ENST00000526669 STBD1O95210 358 aa15.34■□□□□ 0.05
CD44-224ENST00000526669 PFKFB1P16118 471 aa15.34■□□□□ 0.05
CD44-224ENST00000526669 IGBP1P78318 339 aa15.34■□□□□ 0.05
CD44-224ENST00000526669 MTERF2Q49AM1 385 aa15.34■□□□□ 0.05
CD44-224ENST00000526669 TMEM119Q4V9L6 283 aa15.34■□□□□ 0.05
CD44-224ENST00000526669 FAM47CQ5HY64 1035 aa15.34■□□□□ 0.05
CD44-224ENST00000526669 TRAPPC12Q8WVT3 735 aa15.34■□□□□ 0.05
CD44-224ENST00000526669 MRPS27Q92552 414 aaKnown RBP15.34■□□□□ 0.05
CD44-224ENST00000526669 GLT1D1Q96MS3 346 aa15.34■□□□□ 0.05
CD44-224ENST00000526669 KATNAL1Q9BW62 490 aa15.34■□□□□ 0.05
CD44-224ENST00000526669 SENP6Q9GZR1 1112 aaPredicted RBP15.34■□□□□ 0.05
CD44-224ENST00000526669 STARD7Q9NQZ5 370 aa15.34■□□□□ 0.05
CD44-224ENST00000526669 BMP2KQ9NSY1 1161 aaPredicted RBP15.34■□□□□ 0.05
CD44-224ENST00000526669 CCDC39Q9UFE4 941 aa15.34■□□□□ 0.05
CD44-224ENST00000526669 STK24Q9Y6E0 443 aa15.34■□□□□ 0.05
CD44-224ENST00000526669 HAS3O00219 553 aa15.33■□□□□ 0.04
CD44-224ENST00000526669 DKC1O60832 514 aaKnown RBP eCLIP15.33■□□□□ 0.04
CD44-224ENST00000526669 SMIM10L2AP0DMW4 78 aa15.33■□□□□ 0.04
CD44-224ENST00000526669 SMIM10L2BP0DMW5 78 aa15.33■□□□□ 0.04
CD44-224ENST00000526669 CMA1P23946 247 aa15.33■□□□□ 0.04
CD44-224ENST00000526669 YWHABP31946 246 aaKnown RBP15.33■□□□□ 0.04
CD44-224ENST00000526669 ATN1P54259 1190 aaPredicted RBP15.33■□□□□ 0.04
CD44-224ENST00000526669 NPEPPSP55786 919 aa15.33■□□□□ 0.04
CD44-224ENST00000526669 PPFIA1Q13136 1202 aa15.33■□□□□ 0.04
CD44-224ENST00000526669 DHX8Q14562 1220 aaKnown RBP15.33■□□□□ 0.04
CD44-224ENST00000526669 HYIQ5T013 277 aa15.33■□□□□ 0.04
CD44-224ENST00000526669 C4orf19Q8IY42 314 aa15.33■□□□□ 0.04
CD44-224ENST00000526669 ATP8B4Q8TF62 1192 aa15.33■□□□□ 0.04
CD44-224ENST00000526669 DHX58Q96C10 678 aa15.33■□□□□ 0.04
CD44-224ENST00000526669 ZBTB10Q96DT7 871 aa15.33■□□□□ 0.04
CD44-224ENST00000526669 PAWRQ96IZ0 340 aaKnown RBP15.33■□□□□ 0.04
CD44-224ENST00000526669 FAM167AQ96KS9 214 aa15.33■□□□□ 0.04
CD44-224ENST00000526669 CCDC43Q96MW1 224 aaKnown RBP15.33■□□□□ 0.04
CD44-224ENST00000526669 LMBRD1Q9NUN5 540 aa15.33■□□□□ 0.04
CD44-224ENST00000526669 HDAC6Q9UBN7 1215 aa15.33■□□□□ 0.04
CD44-224ENST00000526669 GRIN2DO15399 1336 aa15.33■□□□□ 0.04
CD44-224ENST00000526669 A0A1W2PQ27 194 aa15.32■□□□□ 0.04
CD44-224ENST00000526669 A0A1W2PQ64 194 aa15.32■□□□□ 0.04
CD44-224ENST00000526669 A0A1W2PQD8 194 aa15.32■□□□□ 0.04
CD44-224ENST00000526669 GOLGA6L22H0YM25 854 aa15.32■□□□□ 0.04
CD44-224ENST00000526669 POLR2DO15514 142 aaKnown RBP15.32■□□□□ 0.04
CD44-224ENST00000526669 HBP1O60381 514 aa15.32■□□□□ 0.04
CD44-224ENST00000526669 CABYRO75952 493 aa15.32■□□□□ 0.04
CD44-224ENST00000526669 SSBP05455 408 aaKnown RBP eCLIP15.32■□□□□ 0.04
CD44-224ENST00000526669 INSRRP14616 1297 aa15.32■□□□□ 0.04
CD44-224ENST00000526669 STAT6P42226 847 aa15.32■□□□□ 0.04
CD44-224ENST00000526669 NDUFA8P51970 172 aa15.32■□□□□ 0.04
CD44-224ENST00000526669 ZNF200P98182 395 aaPredicted RBP15.32■□□□□ 0.04
CD44-224ENST00000526669 ITGA7Q13683 1181 aa15.32■□□□□ 0.04
CD44-224ENST00000526669 HIC1Q14526 733 aa15.32■□□□□ 0.04
CD44-224ENST00000526669 MCM6Q14566 821 aa15.32■□□□□ 0.04
CD44-224ENST00000526669 GRIK4Q16099 956 aa15.32■□□□□ 0.04
CD44-224ENST00000526669 XKR9Q5GH70 373 aa15.32■□□□□ 0.04
CD44-224ENST00000526669 XKR3Q5GH77 459 aa15.32■□□□□ 0.04
CD44-224ENST00000526669 RRAGBQ5VZM2 374 aa15.32■□□□□ 0.04
CD44-224ENST00000526669 ANO5Q75V66 913 aa15.32■□□□□ 0.04
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