RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 TRAPPC12Q8WVT3 735 aa13.4□□□□□ -0.26
CAPN1-204ENST00000526468 CLP1Q92989 425 aaKnown RBP13.4□□□□□ -0.26
CAPN1-204ENST00000526468 PGBD1Q96JS3 809 aa13.4□□□□□ -0.26
CAPN1-204ENST00000526468 POP1Q99575 1024 aaKnown RBP13.4□□□□□ -0.26
CAPN1-204ENST00000526468 LSG1Q9H089 658 aaKnown RBP13.4□□□□□ -0.26
CAPN1-204ENST00000526468 IGFLR1Q9H665 355 aa13.4□□□□□ -0.26
CAPN1-204ENST00000526468 AGO3Q9H9G7 860 aaKnown RBP13.4□□□□□ -0.26
CAPN1-204ENST00000526468 ANO2Q9NQ90 1003 aa13.4□□□□□ -0.26
CAPN1-204ENST00000526468 JADE2Q9NQC1 790 aa13.4□□□□□ -0.26
CAPN1-204ENST00000526468 PRKAG3Q9UGI9 489 aa13.4□□□□□ -0.26
CAPN1-204ENST00000526468 DENND4AQ7Z401 1863 aa13.4□□□□□ -0.26
CAPN1-204ENST00000526468 ENPP3O14638 875 aa13.39□□□□□ -0.27
CAPN1-204ENST00000526468 DGKIO75912 1065 aa13.39□□□□□ -0.27
CAPN1-204ENST00000526468 GTF2F1P35269 517 aaKnown RBP eCLIP13.39□□□□□ -0.27
CAPN1-204ENST00000526468 LTBRP36941 435 aa13.39□□□□□ -0.27
CAPN1-204ENST00000526468 LIFRP42702 1097 aa13.39□□□□□ -0.27
CAPN1-204ENST00000526468 ADCY7P51828 1080 aa13.39□□□□□ -0.27
CAPN1-204ENST00000526468 ACTR2P61160 394 aa13.39□□□□□ -0.27
CAPN1-204ENST00000526468 SMAD4Q13485 552 aaKnown RBP13.39□□□□□ -0.27
CAPN1-204ENST00000526468 IER5Q5VY09 327 aa13.39□□□□□ -0.27
CAPN1-204ENST00000526468 CREB3L3Q68CJ9 461 aa13.39□□□□□ -0.27
CAPN1-204ENST00000526468 PPP1R18Q6NYC8 613 aa13.39□□□□□ -0.27
CAPN1-204ENST00000526468 NPAS4Q8IUM7 802 aa13.39□□□□□ -0.27
CAPN1-204ENST00000526468 CMTR2Q8IYT2 770 aaKnown RBP13.39□□□□□ -0.27
CAPN1-204ENST00000526468 PPP2R3CQ969Q6 453 aa13.39□□□□□ -0.27
CAPN1-204ENST00000526468 PCYT2Q99447 389 aa13.39□□□□□ -0.27
CAPN1-204ENST00000526468 PLVAPQ9BX97 442 aa13.39□□□□□ -0.27
CAPN1-204ENST00000526468 FTHL17Q9BXU8 183 aa13.39□□□□□ -0.27
CAPN1-204ENST00000526468 ANO3Q9BYT9 981 aa13.39□□□□□ -0.27
CAPN1-204ENST00000526468 ALG13Q9NP73 1137 aaKnown RBP13.39□□□□□ -0.27
CAPN1-204ENST00000526468 KCNH7Q9NS40 1196 aa13.39□□□□□ -0.27
CAPN1-204ENST00000526468 WDFY4Q6ZS81 3184 aa13.39□□□□□ -0.27
CAPN1-204ENST00000526468 NFASCO94856 1347 aa13.39□□□□□ -0.27
CAPN1-204ENST00000526468 IGSF9BQ9UPX0 1349 aa13.39□□□□□ -0.27
CAPN1-204ENST00000526468 C2orf16Q68DN1 1984 aa13.38□□□□□ -0.27
CAPN1-204ENST00000526468 DDX39AO00148 427 aaKnown RBP13.38□□□□□ -0.27
CAPN1-204ENST00000526468 LINC01565O15544 149 aa13.38□□□□□ -0.27
CAPN1-204ENST00000526468 SCG2P13521 617 aa13.38□□□□□ -0.27
CAPN1-204ENST00000526468 DLX2Q07687 328 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-204ENST00000526468 PLCB4Q15147 1175 aa13.38□□□□□ -0.27
CAPN1-204ENST00000526468 SMAD2Q15796 467 aaKnown RBP13.38□□□□□ -0.27
CAPN1-204ENST00000526468 SYNE3Q6ZMZ3 975 aa13.38□□□□□ -0.27
CAPN1-204ENST00000526468 ZNF689Q96CS4 500 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-204ENST00000526468 ESYT1Q9BSJ8 1104 aa13.38□□□□□ -0.27
CAPN1-204ENST00000526468 CD207Q9UJ71 328 aa13.38□□□□□ -0.27
CAPN1-204ENST00000526468 LRFN2Q9ULH4 789 aa13.38□□□□□ -0.27
CAPN1-204ENST00000526468 GINS2Q9Y248 185 aa13.38□□□□□ -0.27
CAPN1-204ENST00000526468 TDRD15B5MCY1 1934 aaKnown RBP13.38□□□□□ -0.27
CAPN1-204ENST00000526468 BACH1O14867 736 aa13.37□□□□□ -0.27
CAPN1-204ENST00000526468 MBTPS2O43462 519 aa13.37□□□□□ -0.27
CAPN1-204ENST00000526468 STAG3L1P0CL83 205 aa13.37□□□□□ -0.27
CAPN1-204ENST00000526468 IRS1P35568 1242 aa13.37□□□□□ -0.27
CAPN1-204ENST00000526468 GATMP50440 423 aa13.37□□□□□ -0.27
CAPN1-204ENST00000526468 RTN1Q16799 776 aa13.37□□□□□ -0.27
CAPN1-204ENST00000526468 TMEM266Q2M3C6 531 aa13.37□□□□□ -0.27
CAPN1-204ENST00000526468 CTC1Q2NKJ3 1217 aa13.37□□□□□ -0.27
CAPN1-204ENST00000526468 TYW1BQ6NUM6 668 aa13.37□□□□□ -0.27
CAPN1-204ENST00000526468 APOA5Q6Q788 366 aa13.37□□□□□ -0.27
CAPN1-204ENST00000526468 FANCBQ8NB91 859 aa13.37□□□□□ -0.27
CAPN1-204ENST00000526468 CYP2W1Q8TAV3 490 aa13.37□□□□□ -0.27
CAPN1-204ENST00000526468 TNPO1Q92973 898 aaKnown RBP13.37□□□□□ -0.27
CAPN1-204ENST00000526468 P2RX5Q93086 422 aa13.37□□□□□ -0.27
CAPN1-204ENST00000526468 MXRA8Q9BRK3 442 aa13.37□□□□□ -0.27
CAPN1-204ENST00000526468 RBM28Q9NW13 759 aaKnown RBP13.37□□□□□ -0.27
CAPN1-204ENST00000526468 MUTYHQ9UIF7 546 aa13.37□□□□□ -0.27
CAPN1-204ENST00000526468 PADI3Q9ULW8 664 aa13.37□□□□□ -0.27
CAPN1-204ENST00000526468 POTEB3A0JP26 581 aa13.36□□□□□ -0.27
CAPN1-204ENST00000526468 C19orf67A6NJJ6 358 aa13.36□□□□□ -0.27
CAPN1-204ENST00000526468 MAFGO15525 162 aa13.36□□□□□ -0.27
CAPN1-204ENST00000526468 ITGB1P05556 798 aa13.36□□□□□ -0.27
CAPN1-204ENST00000526468 STAT5BP51692 787 aa13.36□□□□□ -0.27
CAPN1-204ENST00000526468 KRT76Q01546 638 aa13.36□□□□□ -0.27
CAPN1-204ENST00000526468 ITGB3BPQ13352 177 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-204ENST00000526468 NFKBIBQ15653 356 aa13.36□□□□□ -0.27
CAPN1-204ENST00000526468 SPOUT1Q5T280 376 aaKnown RBP13.36□□□□□ -0.27
CAPN1-204ENST00000526468 POTEBQ6S5H4 581 aa13.36□□□□□ -0.27
CAPN1-204ENST00000526468 ADGRD2Q7Z7M1 963 aa13.36□□□□□ -0.27
CAPN1-204ENST00000526468 SGMS1Q86VZ5 419 aa13.36□□□□□ -0.27
CAPN1-204ENST00000526468 TCEANC2Q96MN5 208 aa13.36□□□□□ -0.27
CAPN1-204ENST00000526468 PPP1R16BQ96T49 567 aa13.36□□□□□ -0.27
CAPN1-204ENST00000526468 CELF4Q9BZC1 486 aaKnown RBP13.36□□□□□ -0.27
CAPN1-204ENST00000526468 UPF3BQ9BZI7 483 aaKnown RBP13.36□□□□□ -0.27
CAPN1-204ENST00000526468 AGO4Q9HCK5 861 aaKnown RBP13.36□□□□□ -0.27
CAPN1-204ENST00000526468 RIC8AQ9NPQ8 531 aa13.36□□□□□ -0.27
CAPN1-204ENST00000526468 PLAGL2Q9UPG8 496 aa13.36□□□□□ -0.27
CAPN1-204ENST00000526468 PCDHA2Q9Y5H9 948 aa13.36□□□□□ -0.27
CAPN1-204ENST00000526468 SQORQ9Y6N5 450 aa13.36□□□□□ -0.27
CAPN1-204ENST00000526468 COL1A2P08123 1366 aa13.35□□□□□ -0.27
CAPN1-204ENST00000526468 SMIM35A0A1B0GVV1 85 aa13.35□□□□□ -0.27
CAPN1-204ENST00000526468 GOLGA8AA7E2F4 631 aa13.35□□□□□ -0.27
CAPN1-204ENST00000526468 GOLGA8BA8MQT2 603 aa13.35□□□□□ -0.27
CAPN1-204ENST00000526468 hCG_1984214I3L0E3 225 aa13.35□□□□□ -0.27
CAPN1-204ENST00000526468 STXBP3O00186 592 aa13.35□□□□□ -0.27
CAPN1-204ENST00000526468 ZBTB43O43298 467 aa13.35□□□□□ -0.27
CAPN1-204ENST00000526468 ARP10275 920 aa13.35□□□□□ -0.27
CAPN1-204ENST00000526468 DNAJB1P25685 340 aa13.35□□□□□ -0.27
CAPN1-204ENST00000526468 ZNF76P36508 570 aa13.35□□□□□ -0.27
CAPN1-204ENST00000526468 NRIP1P48552 1158 aa13.35□□□□□ -0.27
CAPN1-204ENST00000526468 NFX1Q12986 1120 aaKnown RBP13.35□□□□□ -0.27
CAPN1-204ENST00000526468 AP3B2Q13367 1082 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms