RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 C1orf159Q96HA4 380 aa6.58□□□□□ -1.36
C11orf54-203ENST00000526335 MRFAP1L1Q96HT8 127 aa6.58□□□□□ -1.36
C11orf54-203ENST00000526335 MRC2Q9UBG0 1479 aa6.58□□□□□ -1.36
C11orf54-203ENST00000526335 SLC27A2O14975 620 aa6.57□□□□□ -1.36
C11orf54-203ENST00000526335 DDAH1O94760 285 aa6.57□□□□□ -1.36
C11orf54-203ENST00000526335 CHGBP05060 677 aa6.57□□□□□ -1.36
C11orf54-203ENST00000526335 GRIN1Q05586 938 aa6.57□□□□□ -1.36
C11orf54-203ENST00000526335 NFE2L2Q16236 605 aa6.57□□□□□ -1.36
C11orf54-203ENST00000526335 SLC35F1Q5T1Q4 408 aa6.57□□□□□ -1.36
C11orf54-203ENST00000526335 ANKS3Q6ZW76 656 aa6.57□□□□□ -1.36
C11orf54-203ENST00000526335 JAZF1Q86VZ6 243 aa6.57□□□□□ -1.36
C11orf54-203ENST00000526335 CERS3Q8IU89 383 aa6.57□□□□□ -1.36
C11orf54-203ENST00000526335 ANKRD13AQ8IZ07 590 aa6.57□□□□□ -1.36
C11orf54-203ENST00000526335 PIP4K2CQ8TBX8 421 aa6.57□□□□□ -1.36
C11orf54-203ENST00000526335 LARP4BQ92615 738 aaKnown RBP6.57□□□□□ -1.36
C11orf54-203ENST00000526335 LMF1Q96S06 567 aa6.57□□□□□ -1.36
C11orf54-203ENST00000526335 SLC6A20Q9NP91 592 aa6.57□□□□□ -1.36
C11orf54-203ENST00000526335 NPFFR2Q9Y5X5 522 aa6.57□□□□□ -1.36
C11orf54-203ENST00000526335 WASHC2AQ641Q2 1341 aa6.57□□□□□ -1.36
C11orf54-203ENST00000526335 ARHGEF11O15085 1522 aa6.57□□□□□ -1.36
C11orf54-203ENST00000526335 MAPKBP1O60336 1514 aa6.57□□□□□ -1.36
C11orf54-203ENST00000526335 NBPF6Q5VWK0 638 aa6.57□□□□□ -1.36
C11orf54-203ENST00000526335 EGFLAMQ63HQ2 1017 aa6.57□□□□□ -1.36
C11orf54-203ENST00000526335 IFNL2Q8IZJ0 200 aa6.57□□□□□ -1.36
C11orf54-203ENST00000526335 GIMAP8Q8ND71 665 aaPredicted RBP6.57□□□□□ -1.36
C11orf54-203ENST00000526335 NBPF4Q96M43 638 aa6.57□□□□□ -1.36
C11orf54-203ENST00000526335 LRRC37BQ96QE4 947 aa6.57□□□□□ -1.36
C11orf54-203ENST00000526335 JAM3Q9BX67 310 aa6.57□□□□□ -1.36
C11orf54-203ENST00000526335 MRPL42Q9Y6G3 142 aaKnown RBP6.57□□□□□ -1.36
C11orf54-203ENST00000526335 KIF21AQ7Z4S6 1674 aa6.56□□□□□ -1.36
C11orf54-203ENST00000526335 ERBB2P04626 1255 aa6.56□□□□□ -1.36
C11orf54-203ENST00000526335 C1SP09871 688 aa6.56□□□□□ -1.36
C11orf54-203ENST00000526335 ANP32AP39687 249 aaKnown RBP6.56□□□□□ -1.36
C11orf54-203ENST00000526335 SERINC3Q13530 473 aa6.56□□□□□ -1.36
C11orf54-203ENST00000526335 GPR155Q7Z3F1 870 aa6.56□□□□□ -1.36
C11orf54-203ENST00000526335 C1orf210Q8IVY1 113 aa6.56□□□□□ -1.36
C11orf54-203ENST00000526335 KCTD13Q8WZ19 329 aa6.56□□□□□ -1.36
C11orf54-203ENST00000526335 AJUBAQ96IF1 538 aa6.56□□□□□ -1.36
C11orf54-203ENST00000526335 IPO9Q96P70 1041 aaKnown RBP6.56□□□□□ -1.36
C11orf54-203ENST00000526335 PLEKHG4BQ96PX9 1271 aa6.56□□□□□ -1.36
C11orf54-203ENST00000526335 TRIM55Q9BYV6 548 aa6.56□□□□□ -1.36
C11orf54-203ENST00000526335 CDIP1Q9H305 208 aa6.56□□□□□ -1.36
C11orf54-203ENST00000526335 ZFP69BQ9UJL9 534 aa6.56□□□□□ -1.36
C11orf54-203ENST00000526335 SLC4A7Q9Y6M7 1214 aa6.56□□□□□ -1.36
C11orf54-203ENST00000526335 U2SURPO15042 1029 aaKnown RBP6.55□□□□□ -1.36
C11orf54-203ENST00000526335 KNG1P01042 644 aa6.55□□□□□ -1.36
C11orf54-203ENST00000526335 CKMP06732 381 aa6.55□□□□□ -1.36
C11orf54-203ENST00000526335 CSF2RBP32927 897 aa6.55□□□□□ -1.36
C11orf54-203ENST00000526335 GLRBP48167 497 aa6.55□□□□□ -1.36
C11orf54-203ENST00000526335 MRPS21P82921 87 aaKnown RBP6.55□□□□□ -1.36
C11orf54-203ENST00000526335 MAP4K2Q12851 820 aa6.55□□□□□ -1.36
C11orf54-203ENST00000526335 FXNQ16595 210 aa6.55□□□□□ -1.36
C11orf54-203ENST00000526335 SKIDA1Q1XH10 827 aa6.55□□□□□ -1.36
C11orf54-203ENST00000526335 MRM1Q6IN84 353 aaKnown RBP6.55□□□□□ -1.36
C11orf54-203ENST00000526335 HNRNPLLQ8WVV9 542 aaKnown RBP6.55□□□□□ -1.36
C11orf54-203ENST00000526335 CLEC4DQ8WXI8 215 aa6.55□□□□□ -1.36
C11orf54-203ENST00000526335 EDAQ92838 391 aa6.55□□□□□ -1.36
C11orf54-203ENST00000526335 SRPK1Q96SB4 655 aaKnown RBP6.55□□□□□ -1.36
C11orf54-203ENST00000526335 MMRN2Q9H8L6 949 aa6.55□□□□□ -1.36
C11orf54-203ENST00000526335 GPR27Q9NS67 375 aa6.55□□□□□ -1.36
C11orf54-203ENST00000526335 ARHGAP20Q9P2F6 1191 aa6.55□□□□□ -1.36
C11orf54-203ENST00000526335 CCNB3Q8WWL7 1395 aa6.54□□□□□ -1.36
C11orf54-203ENST00000526335 WASHC2CQ9Y4E1 1318 aa6.54□□□□□ -1.36
C11orf54-203ENST00000526335 AGRPO00253 132 aa6.54□□□□□ -1.36
C11orf54-203ENST00000526335 KLF4O43474 513 aa6.54□□□□□ -1.36
C11orf54-203ENST00000526335 RAMP2O60895 175 aa6.54□□□□□ -1.36
C11orf54-203ENST00000526335 FAHP16930 419 aa6.54□□□□□ -1.36
C11orf54-203ENST00000526335 BMP5P22003 454 aa6.54□□□□□ -1.36
C11orf54-203ENST00000526335 TUSC3Q13454 348 aa6.54□□□□□ -1.36
C11orf54-203ENST00000526335 ZNF568Q3ZCX4 644 aa6.54□□□□□ -1.36
C11orf54-203ENST00000526335 PAN2Q504Q3 1202 aaKnown RBP6.54□□□□□ -1.36
C11orf54-203ENST00000526335 AGBL4Q5VU57 503 aa6.54□□□□□ -1.36
C11orf54-203ENST00000526335 RBM12BQ8IXT5 1001 aaKnown RBP6.54□□□□□ -1.36
C11orf54-203ENST00000526335 SIRPGQ9P1W8 387 aa6.54□□□□□ -1.36
C11orf54-203ENST00000526335 PPARGC1AQ9UBK2 798 aaKnown RBP6.54□□□□□ -1.36
C11orf54-203ENST00000526335 R3HCC1Q9Y3T6 440 aaKnown RBP6.54□□□□□ -1.36
C11orf54-203ENST00000526335 NUB1Q9Y5A7 615 aa6.54□□□□□ -1.36
C11orf54-203ENST00000526335 WDR62O43379 1518 aa6.54□□□□□ -1.36
C11orf54-203ENST00000526335 WDR97A6NE52 1622 aa6.53□□□□□ -1.36
C11orf54-203ENST00000526335 CCDC85CA6NKD9 419 aa6.53□□□□□ -1.36
C11orf54-203ENST00000526335 RAB33AQ14088 237 aa6.53□□□□□ -1.36
C11orf54-203ENST00000526335 PCSK4Q6UW60 755 aa6.53□□□□□ -1.36
C11orf54-203ENST00000526335 EEPD1Q7L9B9 569 aa6.53□□□□□ -1.36
C11orf54-203ENST00000526335 OTOP3Q7RTS5 596 aa6.53□□□□□ -1.36
C11orf54-203ENST00000526335 REXO1L1PQ8IX06 675 aa6.53□□□□□ -1.36
C11orf54-203ENST00000526335 STPG3Q8N7X2 389 aa6.53□□□□□ -1.36
C11orf54-203ENST00000526335 MKL1Q969V6 931 aa6.53□□□□□ -1.36
C11orf54-203ENST00000526335 KCND1Q9NSA2 647 aa6.53□□□□□ -1.36
C11orf54-203ENST00000526335 PRKAG3Q9UGI9 489 aa6.53□□□□□ -1.36
C11orf54-203ENST00000526335 MSCO60682 206 aa6.52□□□□□ -1.37
C11orf54-203ENST00000526335 COMTP21964 271 aa6.52□□□□□ -1.37
C11orf54-203ENST00000526335 FBLP22087 321 aaKnown RBP6.52□□□□□ -1.37
C11orf54-203ENST00000526335 GRIA2P42262 883 aa6.52□□□□□ -1.37
C11orf54-203ENST00000526335 KRTAP10-7P60409 375 aaPredicted RBP6.52□□□□□ -1.37
C11orf54-203ENST00000526335 USP10Q14694 798 aaKnown RBP6.52□□□□□ -1.37
C11orf54-203ENST00000526335 USP53Q70EK8 1073 aa6.52□□□□□ -1.37
C11orf54-203ENST00000526335 ZNF627Q7L945 461 aa6.52□□□□□ -1.37
C11orf54-203ENST00000526335 TAX1BP1Q86VP1 789 aa6.52□□□□□ -1.37
C11orf54-203ENST00000526335 PHF20Q9BVI0 1012 aa6.52□□□□□ -1.37
C11orf54-203ENST00000526335 EPN3Q9H201 632 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms