RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 KIZQ2M2Z5 673 aa4.65□□□□□ -1.67
ECHDC1-219ENST00000526299 USP30Q70CQ3 517 aa4.65□□□□□ -1.67
ECHDC1-219ENST00000526299 GPR135Q8IZ08 494 aa4.65□□□□□ -1.67
ECHDC1-219ENST00000526299 SH3RF2Q8TEC5 729 aa4.65□□□□□ -1.67
ECHDC1-219ENST00000526299 VOPP1Q96AW1 172 aa4.65□□□□□ -1.67
ECHDC1-219ENST00000526299 CCSER2Q9H7U1 834 aa4.65□□□□□ -1.67
ECHDC1-219ENST00000526299 TCRBV5S4A2TA0A5A2 114 aa4.64□□□□□ -1.67
ECHDC1-219ENST00000526299 GJB6O95452 261 aa4.64□□□□□ -1.67
ECHDC1-219ENST00000526299 IL13RA1P78552 427 aa4.64□□□□□ -1.67
ECHDC1-219ENST00000526299 COL10A1Q03692 680 aa4.64□□□□□ -1.67
ECHDC1-219ENST00000526299 GRM7Q14831 915 aa4.64□□□□□ -1.67
ECHDC1-219ENST00000526299 BTBD8Q5XKL5 378 aa4.64□□□□□ -1.67
ECHDC1-219ENST00000526299 EEPD1Q7L9B9 569 aa4.64□□□□□ -1.67
ECHDC1-219ENST00000526299 TMPRSS6Q8IU80 811 aa4.64□□□□□ -1.67
ECHDC1-219ENST00000526299 ULK2Q8IYT8 1036 aa4.64□□□□□ -1.67
ECHDC1-219ENST00000526299 TMEM176AQ96HP8 235 aa4.64□□□□□ -1.67
ECHDC1-219ENST00000526299 IPPKQ9H8X2 491 aa4.64□□□□□ -1.67
ECHDC1-219ENST00000526299 CAPN10Q9HC96 672 aa4.64□□□□□ -1.67
ECHDC1-219ENST00000526299 AURKAIP1Q9NWT8 199 aaPredicted RBP4.64□□□□□ -1.67
ECHDC1-219ENST00000526299 ARHGAP28Q9P2N2 729 aa4.64□□□□□ -1.67
ECHDC1-219ENST00000526299 PRKAG3Q9UGI9 489 aa4.64□□□□□ -1.67
ECHDC1-219ENST00000526299 CDC42EP3Q9UKI2 254 aa4.64□□□□□ -1.67
ECHDC1-219ENST00000526299 GIT1Q9Y2X7 761 aa4.64□□□□□ -1.67
ECHDC1-219ENST00000526299 FAM90A27PA6NNH2 459 aa4.63□□□□□ -1.67
ECHDC1-219ENST00000526299 CAPN14A8MX76 684 aa4.63□□□□□ -1.67
ECHDC1-219ENST00000526299 SOD2P04179 222 aa4.63□□□□□ -1.67
ECHDC1-219ENST00000526299 LMO1P25800 156 aa4.63□□□□□ -1.67
ECHDC1-219ENST00000526299 IL12RB1P42701 662 aa4.63□□□□□ -1.67
ECHDC1-219ENST00000526299 PCOLCEQ15113 449 aa4.63□□□□□ -1.67
ECHDC1-219ENST00000526299 NTRK3Q16288 839 aa4.63□□□□□ -1.67
ECHDC1-219ENST00000526299 SPTY2D1Q68D10 685 aaPredicted RBP4.63□□□□□ -1.67
ECHDC1-219ENST00000526299 FILIP1Q7Z7B0 1213 aa4.63□□□□□ -1.67
ECHDC1-219ENST00000526299 SCUBE1Q8IWY4 988 aa4.63□□□□□ -1.67
ECHDC1-219ENST00000526299 D2HGDHQ8N465 521 aa4.63□□□□□ -1.67
ECHDC1-219ENST00000526299 DCAF4Q8WV16 495 aa4.63□□□□□ -1.67
ECHDC1-219ENST00000526299 MRRFQ96E11 262 aaKnown RBP4.63□□□□□ -1.67
ECHDC1-219ENST00000526299 PRRX2Q99811 253 aa4.63□□□□□ -1.67
ECHDC1-219ENST00000526299 RIC8BQ9NVN3 520 aa4.63□□□□□ -1.67
ECHDC1-219ENST00000526299 PARPBPQ9NWS1 579 aa4.63□□□□□ -1.67
ECHDC1-219ENST00000526299 KRTAP23-1A1A580 65 aa4.62□□□□□ -1.67
ECHDC1-219ENST00000526299 FOXN1O15353 648 aa4.62□□□□□ -1.67
ECHDC1-219ENST00000526299 PTPN1P18031 435 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-219ENST00000526299 BMP5P22003 454 aa4.62□□□□□ -1.67
ECHDC1-219ENST00000526299 GJA4P35212 333 aa4.62□□□□□ -1.67
ECHDC1-219ENST00000526299 GPR85P60893 370 aa4.62□□□□□ -1.67
ECHDC1-219ENST00000526299 HHEXQ03014 270 aa4.62□□□□□ -1.67
ECHDC1-219ENST00000526299 FSTL1Q12841 308 aa4.62□□□□□ -1.67
ECHDC1-219ENST00000526299 HSP90AA2PQ14568 343 aaPredicted RBP4.62□□□□□ -1.67
ECHDC1-219ENST00000526299 RRP1BQ14684 758 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-219ENST00000526299 RPUSD2Q8IZ73 545 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-219ENST00000526299 OR14K1Q8NGZ2 314 aa4.62□□□□□ -1.67
ECHDC1-219ENST00000526299 EPN3Q9H201 632 aa4.62□□□□□ -1.67
ECHDC1-219ENST00000526299 AGO3Q9H9G7 860 aaKnown RBP4.62□□□□□ -1.67
ECHDC1-219ENST00000526299 ST7Q9NRC1 585 aa4.62□□□□□ -1.67
ECHDC1-219ENST00000526299 BLACEA4D250 179 aa4.61□□□□□ -1.67
ECHDC1-219ENST00000526299 FAM47E-STBD1D6RA91 191 aa4.61□□□□□ -1.67
ECHDC1-219ENST00000526299 PRODHO43272 600 aa4.61□□□□□ -1.67
ECHDC1-219ENST00000526299 PTGS1P23219 599 aa4.61□□□□□ -1.67
ECHDC1-219ENST00000526299 MC4RP32245 332 aa4.61□□□□□ -1.67
ECHDC1-219ENST00000526299 MRE11P49959 708 aa4.61□□□□□ -1.67
ECHDC1-219ENST00000526299 SLC25A3Q00325 362 aa4.61□□□□□ -1.67
ECHDC1-219ENST00000526299 EIF4HQ15056 248 aaKnown RBP4.61□□□□□ -1.67
ECHDC1-219ENST00000526299 ADGRE4PQ86SQ3 457 aa4.61□□□□□ -1.67
ECHDC1-219ENST00000526299 IFNL3Q8IZI9 196 aa4.61□□□□□ -1.67
ECHDC1-219ENST00000526299 THEMISQ8N1K5 641 aaPredicted RBP4.61□□□□□ -1.67
ECHDC1-219ENST00000526299 OR10A2Q9H208 303 aa4.61□□□□□ -1.67
ECHDC1-219ENST00000526299 NELFAQ9H3P2 528 aa4.61□□□□□ -1.67
ECHDC1-219ENST00000526299 MSL2Q9HCI7 577 aa4.61□□□□□ -1.67
ECHDC1-219ENST00000526299 INCENPQ9NQS7 918 aa4.61□□□□□ -1.67
ECHDC1-219ENST00000526299 GALNT8Q9NY28 637 aa4.61□□□□□ -1.67
ECHDC1-219ENST00000526299 FBXO10Q9UK96 956 aa4.61□□□□□ -1.67
ECHDC1-219ENST00000526299 ZBTB7CA1YPR0 619 aa4.6□□□□□ -1.67
ECHDC1-219ENST00000526299 RPS6KA4O75676 772 aa4.6□□□□□ -1.67
ECHDC1-219ENST00000526299 HGFACQ04756 655 aa4.6□□□□□ -1.67
ECHDC1-219ENST00000526299 CRHR2Q13324 411 aa4.6□□□□□ -1.67
ECHDC1-219ENST00000526299 TRIM68Q6AZZ1 485 aa4.6□□□□□ -1.67
ECHDC1-219ENST00000526299 LAIR1Q6GTX8 287 aa4.6□□□□□ -1.67
ECHDC1-219ENST00000526299 CXXC5Q7LFL8 322 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-219ENST00000526299 OTOP2Q7RTS6 562 aa4.6□□□□□ -1.67
ECHDC1-219ENST00000526299 SHCBP1Q8NEM2 672 aa4.6□□□□□ -1.67
ECHDC1-219ENST00000526299 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.6□□□□□ -1.67
ECHDC1-219ENST00000526299 OSBP2Q969R2 916 aa4.6□□□□□ -1.67
ECHDC1-219ENST00000526299 NAF1Q96HR8 494 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-219ENST00000526299 ZFYVE21Q9BQ24 234 aa4.6□□□□□ -1.67
ECHDC1-219ENST00000526299 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.6□□□□□ -1.677e-6■■■■□ 21.2
ECHDC1-219ENST00000526299 GPRC5BQ9NZH0 403 aa4.6□□□□□ -1.67
ECHDC1-219ENST00000526299 SRPK3Q9UPE1 567 aa4.6□□□□□ -1.67
ECHDC1-219ENST00000526299 R3HCC1Q9Y3T6 440 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-219ENST00000526299 ASXL2Q76L83 1435 aa4.6□□□□□ -1.67
ECHDC1-219ENST00000526299 MEOX1P50221 254 aa4.59□□□□□ -1.67
ECHDC1-219ENST00000526299 CD83Q01151 205 aa4.59□□□□□ -1.67
ECHDC1-219ENST00000526299 STILQ15468 1287 aa4.59□□□□□ -1.67
ECHDC1-219ENST00000526299 STYK1Q6J9G0 422 aa4.59□□□□□ -1.67
ECHDC1-219ENST00000526299 NSMFQ6X4W1 530 aa4.59□□□□□ -1.67
ECHDC1-219ENST00000526299 ARHGAP36Q6ZRI8 547 aa4.59□□□□□ -1.67
ECHDC1-219ENST00000526299 RTKN2Q8IZC4 609 aa4.59□□□□□ -1.67
ECHDC1-219ENST00000526299 WNK4Q96J92 1243 aa4.59□□□□□ -1.67
ECHDC1-219ENST00000526299 AARSD1Q9BTE6 412 aaKnown RBP4.59□□□□□ -1.67
ECHDC1-219ENST00000526299 A0A0G2JNJ9 132 aa4.58□□□□□ -1.68
ECHDC1-219ENST00000526299 TMEM191CA6NGB0 347 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms