RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 BANK1Q8NDB2 785 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 PPTC7Q8NI37 304 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 TRAPPC12Q8WVT3 735 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 EMID1Q96A84 441 aaPredicted RBP7.31□□□□□ -1.24
CD44-214ENST00000525211 FAM20AQ96MK3 541 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 CTAGE1Q96RT6 745 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 RIT2Q99578 217 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 EIF2AK1Q9BQI3 630 aaKnown RBP7.31□□□□□ -1.24
CD44-214ENST00000525211 TEKT3Q9BXF9 490 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 RNPEPQ9H4A4 650 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 GOLPH3LQ9H4A5 285 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 MLXIPQ9HAP2 919 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 POLD4Q9HCU8 107 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 JPH1Q9HDC5 661 aaPredicted RBP7.31□□□□□ -1.24
CD44-214ENST00000525211 POLR3EQ9NVU0 708 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 PCDHA7Q9UN72 937 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 DNAH12Q6ZR08 3092 aa7.31□□□□□ -1.24
CD44-214ENST00000525211 ELP1O95163 1332 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 POTEB3A0JP26 581 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 ZBTB42B2RXF5 422 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 B4DLN1 442 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 HAS3O00219 553 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 TBX3O15119 743 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 NKRFO15226 690 aaKnown RBP eCLIP7.3□□□□□ -1.24
CD44-214ENST00000525211 SPTLC2O15270 562 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 MAFGO15525 162 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 SLITRK3O94933 977 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 TFRCP02786 760 aaKnown RBP7.3□□□□□ -1.24
CD44-214ENST00000525211 LGALS2P05162 132 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 NCLP19338 710 aaKnown RBP7.3□□□□□ -1.24
CD44-214ENST00000525211 CST5P28325 142 aaPredicted RBP7.3□□□□□ -1.24
CD44-214ENST00000525211 NPEPPSP55786 919 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 PURAQ00577 322 aaKnown RBP7.3□□□□□ -1.24
CD44-214ENST00000525211 LAMC2Q13753 1193 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 NEDD9Q14511 834 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 PLCB4Q15147 1175 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 STK38Q15208 465 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 GNASQ5JWF2 1037 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 PLA2G4FQ68DD2 849 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 POTEBQ6S5H4 581 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 MIER3Q7Z3K6 550 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 CATSPER3Q86XQ3 398 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 SEPT1Q8WYJ6 367 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 WNT8BQ93098 351 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 CEP89Q96ST8 783 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 HSD17B14Q9BPX1 270 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 SDF4Q9BRK5 362 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 PANK2Q9BZ23 570 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 OSBPL7Q9BZF2 842 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 AP5M1Q9H0R1 490 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 DISC1Q9NRI5 854 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 GABBR1Q9UBS5 961 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 PCDHA12Q9UN75 941 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 Q9Y3F1 56 aa7.3□□□□□ -1.24
CD44-214ENST00000525211 SRPRBQ9Y5M8 271 aaKnown RBP7.3□□□□□ -1.24
CD44-214ENST00000525211 IGSF9BQ9UPX0 1349 aa7.29□□□□□ -1.24
CD44-214ENST00000525211 A0A1W2PQ45 241 aaPredicted RBP7.29□□□□□ -1.24
CD44-214ENST00000525211 A0A1W2PQY0 241 aa7.29□□□□□ -1.24
CD44-214ENST00000525211 CCDC85CA6NKD9 419 aa7.29□□□□□ -1.24
CD44-214ENST00000525211 PPP1R3GB7ZBB8 358 aa7.29□□□□□ -1.24
CD44-214ENST00000525211 YEATS4O95619 227 aa7.29□□□□□ -1.24
CD44-214ENST00000525211 COL6A1P12109 1028 aa7.29□□□□□ -1.24
CD44-214ENST00000525211 SSTR3P32745 418 aaPredicted RBP7.29□□□□□ -1.24
CD44-214ENST00000525211 PRPHP41219 470 aa7.29□□□□□ -1.24
CD44-214ENST00000525211 PSEN2P49810 448 aa7.29□□□□□ -1.24
CD44-214ENST00000525211 ACLYP53396 1101 aa7.29□□□□□ -1.24
CD44-214ENST00000525211 CHMP4BP1P59074 171 aa7.29□□□□□ -1.24
CD44-214ENST00000525211 KARSQ15046 597 aaKnown RBP7.29□□□□□ -1.24
CD44-214ENST00000525211 EPHA7Q15375 998 aa7.29□□□□□ -1.24
CD44-214ENST00000525211 NBPF20Q3BBV1 942 aa7.29□□□□□ -1.24
CD44-214ENST00000525211 MARCH8Q5T0T0 291 aa7.29□□□□□ -1.24
CD44-214ENST00000525211 ZNF746Q6NUN9 644 aaPredicted RBP7.29□□□□□ -1.24
CD44-214ENST00000525211 KCNV1Q6PIU1 500 aa7.29□□□□□ -1.24
CD44-214ENST00000525211 POTEGQ6S5H5 508 aa7.29□□□□□ -1.24
CD44-214ENST00000525211 DTHD1Q6ZMT9 781 aa7.29□□□□□ -1.24
CD44-214ENST00000525211 PIGOQ8TEQ8 1089 aa7.29□□□□□ -1.24
CD44-214ENST00000525211 SYMPKQ92797 1274 aaKnown RBP7.29□□□□□ -1.24
CD44-214ENST00000525211 PAWRQ96IZ0 340 aaKnown RBP7.29□□□□□ -1.24
CD44-214ENST00000525211 CDHR1Q96JP9 859 aa7.29□□□□□ -1.24
CD44-214ENST00000525211 ZNF396Q96N95 335 aaPredicted RBP7.29□□□□□ -1.24
CD44-214ENST00000525211 MPHOSPH6Q99547 160 aaKnown RBP7.29□□□□□ -1.24
CD44-214ENST00000525211 MTRQ99707 1265 aa7.29□□□□□ -1.24
CD44-214ENST00000525211 TBC1D22BQ9NU19 505 aa7.29□□□□□ -1.24
CD44-214ENST00000525211 BLOC1S4Q9NUP1 217 aa7.29□□□□□ -1.24
CD44-214ENST00000525211 PHF24Q9UPV7 400 aa7.29□□□□□ -1.24
CD44-214ENST00000525211 MAFBQ9Y5Q3 323 aaPredicted RBP7.29□□□□□ -1.24
CD44-214ENST00000525211 WDR81Q562E7 1941 aa7.29□□□□□ -1.24
CD44-214ENST00000525211 SCN10AQ9Y5Y9 1956 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 NPHP3-ACAD11A0A0J9YXS1 232 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 A0A1B0GVL5 298 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 WDR64B1ANS9 1081 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 E9PMD0 336 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 C3orf80F5H4A9 247 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 MARCH6O60337 910 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 PPP6R2O75170 966 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 F2P00734 622 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 LIG1P18858 919 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 CASP1P29466 404 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 STAT5BP51692 787 aa7.28□□□□□ -1.24
CD44-214ENST00000525211 KRT85P78386 507 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms