RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 ENPP3O14638 875 aa14.25□□□□□ -0.13
SMCO4-202ENST00000525141 CPLX1O14810 134 aa14.25□□□□□ -0.13
SMCO4-202ENST00000525141 EFCAB14O75071 495 aa14.25□□□□□ -0.13
SMCO4-202ENST00000525141 IGBP1P78318 339 aa14.25□□□□□ -0.13
SMCO4-202ENST00000525141 AIFM3Q96NN9 605 aa14.25□□□□□ -0.13
SMCO4-202ENST00000525141 AGO3Q9H9G7 860 aaKnown RBP14.25□□□□□ -0.13
SMCO4-202ENST00000525141 PCDHA2Q9Y5H9 948 aa14.25□□□□□ -0.13
SMCO4-202ENST00000525141 ZBTB42B2RXF5 422 aa14.24□□□□□ -0.13
SMCO4-202ENST00000525141 IPO5O00410 1097 aaKnown RBP14.24□□□□□ -0.13
SMCO4-202ENST00000525141 GHRP10912 638 aa14.24□□□□□ -0.13
SMCO4-202ENST00000525141 GNA11P29992 359 aa14.24□□□□□ -0.13
SMCO4-202ENST00000525141 AKAP17AQ02040 695 aaKnown RBP14.24□□□□□ -0.13
SMCO4-202ENST00000525141 SCRN1Q12765 414 aa14.24□□□□□ -0.13
SMCO4-202ENST00000525141 STK3Q13188 491 aa14.24□□□□□ -0.13
SMCO4-202ENST00000525141 FBXO47Q5MNV8 452 aa14.24□□□□□ -0.13
SMCO4-202ENST00000525141 SWSAP1Q6NVH7 229 aa14.24□□□□□ -0.13
SMCO4-202ENST00000525141 TAF2Q6P1X5 1199 aa14.24□□□□□ -0.13
SMCO4-202ENST00000525141 MTHFD1LQ6UB35 978 aa14.24□□□□□ -0.13
SMCO4-202ENST00000525141 CCDC60Q8IWA6 550 aaPredicted RBP14.24□□□□□ -0.13
SMCO4-202ENST00000525141 MYOCDQ8IZQ8 938 aa14.24□□□□□ -0.13
SMCO4-202ENST00000525141 REXO1Q8N1G1 1221 aaKnown RBP14.24□□□□□ -0.13
SMCO4-202ENST00000525141 CDHR5Q9HBB8 845 aa14.24□□□□□ -0.13
SMCO4-202ENST00000525141 SH3GLB2Q9NR46 395 aa14.24□□□□□ -0.13
SMCO4-202ENST00000525141 TUBE1Q9UJT0 475 aa14.24□□□□□ -0.13
SMCO4-202ENST00000525141 LIMCH1Q9UPQ0 1083 aa14.24□□□□□ -0.13
SMCO4-202ENST00000525141 INSL6Q9Y581 213 aa14.24□□□□□ -0.13
SMCO4-202ENST00000525141 CDY2AQ9Y6F7 541 aa14.24□□□□□ -0.13
SMCO4-202ENST00000525141 TTC28Q96AY4 2481 aa14.24□□□□□ -0.13
SMCO4-202ENST00000525141 SIP14410 1827 aa14.24□□□□□ -0.13
SMCO4-202ENST00000525141 SPTBN5Q9NRC6 3674 aaKnown RBP14.23□□□□□ -0.13
SMCO4-202ENST00000525141 POTEB3A0JP26 581 aa14.23□□□□□ -0.13
SMCO4-202ENST00000525141 CDKL5O76039 1030 aa14.23□□□□□ -0.13
SMCO4-202ENST00000525141 UPP2O95045 317 aa14.23□□□□□ -0.13
SMCO4-202ENST00000525141 AMHP03971 560 aa14.23□□□□□ -0.13
SMCO4-202ENST00000525141 KLRC1P26715 233 aa14.23□□□□□ -0.13
SMCO4-202ENST00000525141 SSRP1Q08945 709 aaKnown RBP14.23□□□□□ -0.13
SMCO4-202ENST00000525141 ME3Q16798 604 aa14.23□□□□□ -0.13
SMCO4-202ENST00000525141 MCTP2Q6DN12 878 aa14.23□□□□□ -0.13
SMCO4-202ENST00000525141 POTEBQ6S5H4 581 aa14.23□□□□□ -0.13
SMCO4-202ENST00000525141 TRIM22Q8IYM9 498 aa14.23□□□□□ -0.13
SMCO4-202ENST00000525141 CRIPAKQ8N1N5 446 aa14.23□□□□□ -0.13
SMCO4-202ENST00000525141 CCDC12Q8WUD4 166 aaPredicted RBP14.23□□□□□ -0.13
SMCO4-202ENST00000525141 GJA10Q969M2 543 aa14.23□□□□□ -0.13
SMCO4-202ENST00000525141 ZSCAN31Q96LW9 406 aaPredicted RBP14.23□□□□□ -0.13
SMCO4-202ENST00000525141 C17orf80Q9BSJ5 609 aa14.23□□□□□ -0.13
SMCO4-202ENST00000525141 ZNF577Q9BSK1 485 aa14.23□□□□□ -0.13
SMCO4-202ENST00000525141 IFIH1Q9BYX4 1025 aaKnown RBP14.23□□□□□ -0.13
SMCO4-202ENST00000525141 AZI2Q9H6S1 392 aa14.23□□□□□ -0.13
SMCO4-202ENST00000525141 MAFBQ9Y5Q3 323 aaPredicted RBP14.23□□□□□ -0.13
SMCO4-202ENST00000525141 EVPLQ92817 2033 aa14.23□□□□□ -0.13
SMCO4-202ENST00000525141 LOXHD1Q8IVV2 1947 aa14.23□□□□□ -0.13
SMCO4-202ENST00000525141 MSH4O15457 936 aa14.22□□□□□ -0.13
SMCO4-202ENST00000525141 CTDNEP1O95476 244 aa14.22□□□□□ -0.13
SMCO4-202ENST00000525141 LINC00271P0C7V0 271 aa14.22□□□□□ -0.13
SMCO4-202ENST00000525141 USP11P51784 963 aa14.22□□□□□ -0.13
SMCO4-202ENST00000525141 NLRP5P59047 1200 aa14.22□□□□□ -0.13
SMCO4-202ENST00000525141 MRPS6P82932 125 aaKnown RBP14.22□□□□□ -0.13
SMCO4-202ENST00000525141 TMEM62Q0P6H9 643 aa14.22□□□□□ -0.13
SMCO4-202ENST00000525141 PRR16Q569H4 304 aa14.22□□□□□ -0.13
SMCO4-202ENST00000525141 KIAA0319LQ8IZA0 1049 aa14.22□□□□□ -0.13
SMCO4-202ENST00000525141 SPDYE1Q8NFV5 336 aaPredicted RBP14.22□□□□□ -0.13
SMCO4-202ENST00000525141 ATXN2LQ8WWM7 1075 aaKnown RBP14.22□□□□□ -0.13
SMCO4-202ENST00000525141 LINC01599Q8WXQ3 324 aa14.22□□□□□ -0.13
SMCO4-202ENST00000525141 ASB2Q96Q27 587 aa14.22□□□□□ -0.13
SMCO4-202ENST00000525141 TGS1Q96RS0 853 aaKnown RBP14.22□□□□□ -0.13
SMCO4-202ENST00000525141 FAM49AQ9H0Q0 323 aaPredicted RBP14.22□□□□□ -0.13
SMCO4-202ENST00000525141 ZNF302Q9NR11 478 aa14.22□□□□□ -0.13
SMCO4-202ENST00000525141 TBC1D22BQ9NU19 505 aa14.22□□□□□ -0.13
SMCO4-202ENST00000525141 TRPC6Q9Y210 931 aa14.22□□□□□ -0.13
SMCO4-202ENST00000525141 TTC3P53804 2025 aa14.21□□□□□ -0.13
SMCO4-202ENST00000525141 SMIM35A0A1B0GVV1 85 aa14.21□□□□□ -0.13
SMCO4-202ENST00000525141 ST18O60284 1047 aa14.21□□□□□ -0.13
SMCO4-202ENST00000525141 HBP1O60381 514 aa14.21□□□□□ -0.13
SMCO4-202ENST00000525141 DEXIO95424 95 aa14.21□□□□□ -0.13
SMCO4-202ENST00000525141 BMP1P13497 986 aa14.21□□□□□ -0.13
SMCO4-202ENST00000525141 FAM177A1Q8N128 213 aaPredicted RBP14.21□□□□□ -0.13
SMCO4-202ENST00000525141 MICALL1Q8N3F8 863 aa14.21□□□□□ -0.13
SMCO4-202ENST00000525141 ATP8B4Q8TF62 1192 aa14.21□□□□□ -0.13
SMCO4-202ENST00000525141 APBB2Q92870 758 aa14.21□□□□□ -0.13
SMCO4-202ENST00000525141 GTF3C6Q969F1 213 aa14.21□□□□□ -0.13
SMCO4-202ENST00000525141 CELF4Q9BZC1 486 aaKnown RBP14.21□□□□□ -0.13
SMCO4-202ENST00000525141 GJB4Q9NTQ9 266 aa14.21□□□□□ -0.13
SMCO4-202ENST00000525141 MTUS1Q9ULD2 1270 aa14.21□□□□□ -0.13
SMCO4-202ENST00000525141 PCDHA4Q9UN74 947 aa14.21□□□□□ -0.13
SMCO4-202ENST00000525141 WDR81Q562E7 1941 aa14.21□□□□□ -0.14
SMCO4-202ENST00000525141 CYP3A7-CYP3A51PA0A087WV96 503 aa14.2□□□□□ -0.14
SMCO4-202ENST00000525141 BACH1O14867 736 aa14.2□□□□□ -0.14
SMCO4-202ENST00000525141 ZNF862O60290 1169 aa14.2□□□□□ -0.14
SMCO4-202ENST00000525141 CYP3A7P24462 503 aa14.2□□□□□ -0.14
SMCO4-202ENST00000525141 CD52P31358 61 aa14.2□□□□□ -0.14
SMCO4-202ENST00000525141 SLC26A2P50443 739 aa14.2□□□□□ -0.14
SMCO4-202ENST00000525141 TFF2Q03403 129 aa14.2□□□□□ -0.14
SMCO4-202ENST00000525141 TJAP1Q5JTD0 557 aa14.2□□□□□ -0.14
SMCO4-202ENST00000525141 ZNF746Q6NUN9 644 aaPredicted RBP14.2□□□□□ -0.14
SMCO4-202ENST00000525141 MIS18BP1Q6P0N0 1132 aa14.2□□□□□ -0.14
SMCO4-202ENST00000525141 PDXDC2PQ6P474 469 aa14.2□□□□□ -0.14
SMCO4-202ENST00000525141 B3GNT9Q6UX72 402 aa14.2□□□□□ -0.14
SMCO4-202ENST00000525141 RSPH3Q86UC2 560 aa14.2□□□□□ -0.14
SMCO4-202ENST00000525141 BLIDQ8IZY5 108 aa14.2□□□□□ -0.14
SMCO4-202ENST00000525141 NME8Q8N427 588 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms