RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 USP17L15C9J2P7 530 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 USP17L13C9JLJ4 530 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 USP17L11C9JVI0 530 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 USP17L18D6R9N7 530 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 USP17L22D6RA61 530 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 USP17L17D6RBQ6 530 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 USP17L19D6RCP7 530 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 USP17L20D6RJB6 530 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 MEIS2O14770 477 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 ZEB2O60315 1214 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 NPM3O75607 178 aaKnown RBP9.1□□□□□ -0.95
CHD7-202ENST00000524602 GLI1P08151 1106 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 UCHL3P15374 230 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 NPR1P16066 1061 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 ERCC3P19447 782 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 RXRBP28702 533 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 MMP14P50281 582 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 USP17L24Q0WX57 530 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 CUL1Q13616 776 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 RPS6KA1Q15418 735 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 NFIL3Q16649 462 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 EXOC3L4Q17RC7 722 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 CFAP58Q5T655 872 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 DPY19L2P1Q6NXN4 242 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 USP17L6PQ6QN14 398 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 CATSPER3Q86XQ3 398 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 MS4A14Q96JA4 679 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 SPAG5Q96R06 1193 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 AMNQ9BXJ7 453 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 EPB41L5Q9HCM4 733 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 EHD2Q9NZN4 543 aa9.1□□□□□ -0.95
CHD7-202ENST00000524602 ATXN2Q99700 1313 aaKnown RBP9.09□□□□□ -0.95
CHD7-202ENST00000524602 NPHP3-ACAD11A0A0J9YXS1 232 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 ANKRD65E5RJM6 399 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 FTCDO95954 541 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 GAP43P17677 238 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 CIITAP33076 1130 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 SREBF1P36956 1147 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 NPEPPSP55786 919 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 SPATS2Q86XZ4 545 aaKnown RBP9.09□□□□□ -0.95
CHD7-202ENST00000524602 GMCL1P1Q8NEA9 526 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 ZIM3Q96PE6 472 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 POLR3CQ9BUI4 534 aaPredicted RBP9.09□□□□□ -0.95
CHD7-202ENST00000524602 SMARCAL1Q9NZC9 954 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 ADAMTSL1Q8N6G6 1762 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 POTEFA5A3E0 1075 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 SRRM3A6NNA2 597 aaPredicted RBP9.09□□□□□ -0.95
CHD7-202ENST00000524602 POTEIP0CG38 1075 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 FKBP1AP62942 108 aaKnown RBP9.09□□□□□ -0.95
CHD7-202ENST00000524602 GUCY2DQ02846 1103 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 PTK2Q05397 1052 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 SLFN13Q68D06 897 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 APOBEC3HQ6NTF7 200 aaKnown RBP9.09□□□□□ -0.95
CHD7-202ENST00000524602 POTEGQ6S5H5 508 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 POTEEQ6S8J3 1075 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 KDM7AQ6ZMT4 941 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 SYCE1Q8N0S2 351 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 GJA10Q969M2 543 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 ZDHHC15Q96MV8 337 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 OLFML3Q9NRN5 406 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 SYNPO2Q9UMS6 1093 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 NENFQ9UMX5 172 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 GRIN2DO15399 1336 aa9.09□□□□□ -0.95
CHD7-202ENST00000524602 EBAG9O00559 213 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 EIF3DO15371 548 aaKnown RBP eCLIP9.08□□□□□ -0.963e-6■□□□□ 9
CHD7-202ENST00000524602 KIF4AO95239 1232 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 PON1P27169 355 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 CARSP49589 748 aaKnown RBP9.08□□□□□ -0.96
CHD7-202ENST00000524602 TRAF1Q13077 416 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 EPHA7Q15375 998 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 TTMPQ5BVD1 217 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 LRIG3Q6UXM1 1119 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 LRRC57Q8N9N7 239 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 FLAD1Q8NFF5 587 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 GMCL1Q96IK5 515 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 KRT12Q99456 494 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 REEP2Q9BRK0 252 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 ISCUQ9H1K1 167 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 TAF1DQ9H5J8 278 aaPredicted RBP9.08□□□□□ -0.96
CHD7-202ENST00000524602 NAGPAQ9UK23 515 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 NFU1Q9UMS0 254 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 SPDYE3A6NKU9 549 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 CCDC188H7C350 402 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 CPP00450 1065 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 CYP3A4P08684 503 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 SPATA31C1P0DKV0 1188 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 EEF2P13639 858 aaKnown RBP9.08□□□□□ -0.96
CHD7-202ENST00000524602 PDE6BP35913 854 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 HSPA9P38646 679 aaKnown RBP9.08□□□□□ -0.96
CHD7-202ENST00000524602 JAM2P57087 298 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 GNGT1P63211 74 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 SLC15A2Q16348 729 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 ZNF571Q7Z3V5 609 aaPredicted RBP9.08□□□□□ -0.96
CHD7-202ENST00000524602 SFR1Q86XK3 245 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 LENG9Q96B70 501 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 PI4KBQ9UBF8 816 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 UBE4BO95155 1302 aa9.08□□□□□ -0.96
CHD7-202ENST00000524602 HMGB1P1B2RPK0 211 aaPredicted RBP9.08□□□□□ -0.96
CHD7-202ENST00000524602 F8W031 263 aaPredicted RBP9.08□□□□□ -0.96
CHD7-202ENST00000524602 TBCAO75347 108 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms