RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 SIM2Q14190 667 aaPredicted RBP9.53□□□□□ -0.88
PUM1-213ENST00000524516 BMS1Q14692 1282 aaKnown RBP9.53□□□□□ -0.88
PUM1-213ENST00000524516 STXBP2Q15833 593 aa9.53□□□□□ -0.88
PUM1-213ENST00000524516 LETM2Q2VYF4 491 aa9.53□□□□□ -0.88
PUM1-213ENST00000524516 FBXO47Q5MNV8 452 aa9.53□□□□□ -0.88
PUM1-213ENST00000524516 STPG1Q5TH74 334 aa9.53□□□□□ -0.88
PUM1-213ENST00000524516 CTR9Q6PD62 1173 aa9.53□□□□□ -0.88
PUM1-213ENST00000524516 GPR149Q86SP6 731 aa9.53□□□□□ -0.88
PUM1-213ENST00000524516 RSPH3Q86UC2 560 aa9.53□□□□□ -0.88
PUM1-213ENST00000524516 MRPL43Q8N983 215 aaKnown RBP9.53□□□□□ -0.88
PUM1-213ENST00000524516 CCDC8Q9H0W5 538 aaPredicted RBP9.53□□□□□ -0.88
PUM1-213ENST00000524516 TUT1Q9H6E5 874 aaKnown RBP9.53□□□□□ -0.88
PUM1-213ENST00000524516 SFXN1Q9H9B4 322 aa9.53□□□□□ -0.88
PUM1-213ENST00000524516 ARPP21Q9UBL0 812 aaPredicted RBP9.53□□□□□ -0.88
PUM1-213ENST00000524516 DDX41Q9UJV9 622 aaKnown RBP9.53□□□□□ -0.88
PUM1-213ENST00000524516 GPSM3Q9Y4H4 160 aa9.53□□□□□ -0.88
PUM1-213ENST00000524516 PCDHB7Q9Y5E2 793 aa9.53□□□□□ -0.88
PUM1-213ENST00000524516 NRCAMQ92823 1304 aa9.53□□□□□ -0.88
PUM1-213ENST00000524516 RALGAPA1Q6GYQ0 2036 aa9.53□□□□□ -0.88
PUM1-213ENST00000524516 IGKV6D-41A0A0C4DH26 115 aa9.52□□□□□ -0.89
PUM1-213ENST00000524516 C2orf71A6NGG8 1288 aa9.52□□□□□ -0.89
PUM1-213ENST00000524516 FAM170BA6NMN3 283 aa9.52□□□□□ -0.89
PUM1-213ENST00000524516 PLA2G6O60733 806 aa9.52□□□□□ -0.89
PUM1-213ENST00000524516 TOP3BO95985 862 aaKnown RBP9.52□□□□□ -0.89
PUM1-213ENST00000524516 EPCAMP16422 314 aa9.52□□□□□ -0.89
PUM1-213ENST00000524516 PPM1AP35813 382 aa9.52□□□□□ -0.89
PUM1-213ENST00000524516 PLCB3Q01970 1234 aa9.52□□□□□ -0.89
PUM1-213ENST00000524516 PPP2R5DQ14738 602 aa9.52□□□□□ -0.89
PUM1-213ENST00000524516 SF3A2Q15428 464 aaKnown RBP9.52□□□□□ -0.89
PUM1-213ENST00000524516 CCDC96Q2M329 555 aa9.52□□□□□ -0.89
PUM1-213ENST00000524516 ZNF444Q8N0Y2 327 aaPredicted RBP9.52□□□□□ -0.89
PUM1-213ENST00000524516 STAMQ92783 540 aa9.52□□□□□ -0.89
PUM1-213ENST00000524516 GLG1Q92896 1179 aa9.52□□□□□ -0.89
PUM1-213ENST00000524516 NXPE3Q969Y0 559 aa9.52□□□□□ -0.89
PUM1-213ENST00000524516 C16orf70Q9BSU1 422 aa9.52□□□□□ -0.89
PUM1-213ENST00000524516 LSM14BQ9BX40 385 aaKnown RBP9.52□□□□□ -0.89
PUM1-213ENST00000524516 PRMT8Q9NR22 394 aaPredicted RBP9.52□□□□□ -0.89
PUM1-213ENST00000524516 TYW1Q9NV66 732 aaKnown RBP9.52□□□□□ -0.89
PUM1-213ENST00000524516 CACNA2D2Q9NY47 1150 aa9.52□□□□□ -0.89
PUM1-213ENST00000524516 SLC4A4Q9Y6R1 1079 aa9.52□□□□□ -0.89
PUM1-213ENST00000524516 CCDC171Q6TFL3 1326 aa9.52□□□□□ -0.89
PUM1-213ENST00000524516 DSPP15924 2871 aaKnown RBP9.51□□□□□ -0.89
PUM1-213ENST00000524516 KIAA1217Q5T5P2 1943 aa9.51□□□□□ -0.89
PUM1-213ENST00000524516 HELZ2Q9BYK8 2649 aaKnown RBP9.51□□□□□ -0.89
PUM1-213ENST00000524516 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.51□□□□□ -0.89
PUM1-213ENST00000524516 GIPC1O14908 333 aa9.51□□□□□ -0.89
PUM1-213ENST00000524516 GNAI3P08754 354 aa9.51□□□□□ -0.89
PUM1-213ENST00000524516 ATP8B2P98198 1209 aa9.51□□□□□ -0.89
PUM1-213ENST00000524516 SNW1Q13573 536 aaKnown RBP9.51□□□□□ -0.89
PUM1-213ENST00000524516 HSDL1Q3SXM5 330 aa9.51□□□□□ -0.89
PUM1-213ENST00000524516 RCSD1Q6JBY9 416 aa9.51□□□□□ -0.89
PUM1-213ENST00000524516 RTN4RL1Q86UN2 441 aaPredicted RBP9.51□□□□□ -0.89
PUM1-213ENST00000524516 FEZF2Q8TBJ5 459 aa9.51□□□□□ -0.89
PUM1-213ENST00000524516 CLEC4DQ8WXI8 215 aa9.51□□□□□ -0.89
PUM1-213ENST00000524516 PIK3R5Q8WYR1 880 aa9.51□□□□□ -0.89
PUM1-213ENST00000524516 USP26Q9BXU7 913 aa9.51□□□□□ -0.89
PUM1-213ENST00000524516 RANBP17Q9H2T7 1088 aaKnown RBP9.51□□□□□ -0.89
PUM1-213ENST00000524516 SLC2A4RGQ9NR83 387 aa9.51□□□□□ -0.89
PUM1-213ENST00000524516 WASF3Q9UPY6 502 aa9.51□□□□□ -0.89
PUM1-213ENST00000524516 MTF2Q9Y483 593 aaPredicted RBP9.51□□□□□ -0.89
PUM1-213ENST00000524516 SUPT16HQ9Y5B9 1047 aaKnown RBP9.51□□□□□ -0.89
PUM1-213ENST00000524516 LOXHD1Q8IVV2 1947 aa9.5□□□□□ -0.89
PUM1-213ENST00000524516 TCRBV5S4A2TA0A5A2 114 aa9.5□□□□□ -0.89
PUM1-213ENST00000524516 NCAM2O15394 837 aa9.5□□□□□ -0.89
PUM1-213ENST00000524516 N4BP1O75113 896 aaKnown RBP9.5□□□□□ -0.89
PUM1-213ENST00000524516 GGPS1O95749 300 aa9.5□□□□□ -0.89
PUM1-213ENST00000524516 PRB1P04280 392 aa9.5□□□□□ -0.89
PUM1-213ENST00000524516 LGALS2P05162 132 aa9.5□□□□□ -0.89
PUM1-213ENST00000524516 TSPY3P0CV98 308 aa9.5□□□□□ -0.89
PUM1-213ENST00000524516 TSPY8P0CW00 308 aa9.5□□□□□ -0.89
PUM1-213ENST00000524516 PBX3P40426 434 aa9.5□□□□□ -0.89
PUM1-213ENST00000524516 MGAT3Q09327 533 aa9.5□□□□□ -0.89
PUM1-213ENST00000524516 MLF2Q15773 248 aaPredicted RBP9.5□□□□□ -0.89
PUM1-213ENST00000524516 ZBTB41Q5SVQ8 909 aa9.5□□□□□ -0.89
PUM1-213ENST00000524516 KCNT2Q6UVM3 1135 aa9.5□□□□□ -0.89
PUM1-213ENST00000524516 PROSER1Q86XN7 944 aa9.5□□□□□ -0.89
PUM1-213ENST00000524516 NSUN6Q8TEA1 469 aaKnown RBP9.5□□□□□ -0.89
PUM1-213ENST00000524516 LMBR1Q8WVP7 490 aa9.5□□□□□ -0.89
PUM1-213ENST00000524516 SSH1Q8WYL5 1049 aa9.5□□□□□ -0.89
PUM1-213ENST00000524516 ZNF558Q96NG5 402 aa9.5□□□□□ -0.89
PUM1-213ENST00000524516 KLHL5Q96PQ7 755 aa9.5□□□□□ -0.89
PUM1-213ENST00000524516 MKNK1Q9BUB5 465 aa9.5□□□□□ -0.89
PUM1-213ENST00000524516 OSBPL6Q9BZF3 934 aa9.5□□□□□ -0.89
PUM1-213ENST00000524516 AGO3Q9H9G7 860 aaKnown RBP9.5□□□□□ -0.89
PUM1-213ENST00000524516 ZNF287Q9HBT7 754 aa9.5□□□□□ -0.89
PUM1-213ENST00000524516 LTB4R2Q9NPC1 389 aa9.5□□□□□ -0.89
PUM1-213ENST00000524516 CDY2AQ9Y6F7 541 aa9.5□□□□□ -0.89
PUM1-213ENST00000524516 FNDC1Q4ZHG4 1894 aaPredicted RBP9.5□□□□□ -0.89
PUM1-213ENST00000524516 ITPR1Q14643 2758 aa9.49□□□□□ -0.89
PUM1-213ENST00000524516 CNOT1A5YKK6 2376 aaKnown RBP9.49□□□□□ -0.89
PUM1-213ENST00000524516 PNMA6EA0A0J9YXQ4 647 aa9.49□□□□□ -0.89
PUM1-213ENST00000524516 MINDY4BA8MYZ0 360 aa9.49□□□□□ -0.89
PUM1-213ENST00000524516 NOP56O00567 594 aaKnown RBP9.49□□□□□ -0.89
PUM1-213ENST00000524516 MAP3K13O43283 966 aa9.49□□□□□ -0.89
PUM1-213ENST00000524516 PRDM1O75626 825 aa9.49□□□□□ -0.89
PUM1-213ENST00000524516 CXCL14O95715 111 aa9.49□□□□□ -0.89
PUM1-213ENST00000524516 PLA2G2AP14555 144 aa9.49□□□□□ -0.89
PUM1-213ENST00000524516 CD72P21854 359 aa9.49□□□□□ -0.89
PUM1-213ENST00000524516 PDE4AP27815 886 aa9.49□□□□□ -0.89
PUM1-213ENST00000524516 SLC16A2P36021 539 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms