RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 PLEKHA4Q9H4M7 779 aa12.95□□□□□ -0.34
PTPRK-216ENST00000524481 PARVGQ9HBI0 331 aa12.95□□□□□ -0.34
PTPRK-216ENST00000524481 LRRC53A6NM62 1247 aa12.95□□□□□ -0.34
PTPRK-216ENST00000524481 TMCO5BA8MYB1 307 aa12.95□□□□□ -0.34
PTPRK-216ENST00000524481 IRF6O14896 467 aa12.95□□□□□ -0.34
PTPRK-216ENST00000524481 EXOC3O60645 756 aa12.95□□□□□ -0.34
PTPRK-216ENST00000524481 NDUFA10O95299 355 aa12.95□□□□□ -0.34
PTPRK-216ENST00000524481 MATR3P43243 847 aaKnown RBP eCLIP12.95□□□□□ -0.342e-6■■■□□ 19
PTPRK-216ENST00000524481 RNASE9P60153 205 aaKnown RBP12.95□□□□□ -0.34
PTPRK-216ENST00000524481 CBX1P83916 185 aa12.95□□□□□ -0.34
PTPRK-216ENST00000524481 ITGB3BPQ13352 177 aaPredicted RBP12.95□□□□□ -0.34
PTPRK-216ENST00000524481 CCDC127Q96BQ5 260 aa12.95□□□□□ -0.34
PTPRK-216ENST00000524481 ZBED3Q96IU2 234 aaPredicted RBP12.95□□□□□ -0.34
PTPRK-216ENST00000524481 VPS33BQ9H267 617 aa12.95□□□□□ -0.34
PTPRK-216ENST00000524481 NHEJ1Q9H9Q4 299 aaPredicted RBP12.95□□□□□ -0.34
PTPRK-216ENST00000524481 MORC2Q9Y6X9 1032 aaPredicted RBP12.95□□□□□ -0.34
PTPRK-216ENST00000524481 HIP1RO75146 1068 aa12.95□□□□□ -0.34
PTPRK-216ENST00000524481 KIF20AO95235 890 aa12.95□□□□□ -0.34
PTPRK-216ENST00000524481 PGK2P07205 417 aa12.95□□□□□ -0.34
PTPRK-216ENST00000524481 TRIM49P0CI25 452 aa12.95□□□□□ -0.34
PTPRK-216ENST00000524481 TRIM49CP0CI26 452 aa12.95□□□□□ -0.34
PTPRK-216ENST00000524481 HARSP12081 509 aaKnown RBP12.95□□□□□ -0.34
PTPRK-216ENST00000524481 SLC9A1P19634 815 aa12.95□□□□□ -0.34
PTPRK-216ENST00000524481 KCNH2Q12809 1159 aa12.95□□□□□ -0.34
PTPRK-216ENST00000524481 FSTL1Q12841 308 aa12.95□□□□□ -0.34
PTPRK-216ENST00000524481 KNOP1Q1ED39 458 aaKnown RBP12.95□□□□□ -0.34
PTPRK-216ENST00000524481 MIIPQ5JXC2 388 aa12.95□□□□□ -0.34
PTPRK-216ENST00000524481 GJB7Q6PEY0 223 aa12.95□□□□□ -0.34
PTPRK-216ENST00000524481 SLC16A4O15374 487 aa12.94□□□□□ -0.34
PTPRK-216ENST00000524481 BUB1O43683 1085 aa12.94□□□□□ -0.34
PTPRK-216ENST00000524481 SRGAP2O75044 1071 aa12.94□□□□□ -0.34
PTPRK-216ENST00000524481 EYA4O95677 639 aa12.94□□□□□ -0.34
PTPRK-216ENST00000524481 LRRC63Q05C16 580 aa12.94□□□□□ -0.34
PTPRK-216ENST00000524481 KCTD19Q17RG1 926 aaPredicted RBP12.94□□□□□ -0.34
PTPRK-216ENST00000524481 CYFIP1Q7L576 1253 aa12.94□□□□□ -0.34
PTPRK-216ENST00000524481 HS2ST1Q7LGA3 356 aa12.94□□□□□ -0.34
PTPRK-216ENST00000524481 GPC2Q8N158 579 aa12.94□□□□□ -0.34
PTPRK-216ENST00000524481 FAM84AQ96KN4 292 aa12.94□□□□□ -0.34
PTPRK-216ENST00000524481 HSD17B14Q9BPX1 270 aa12.94□□□□□ -0.34
PTPRK-216ENST00000524481 JADE2Q9NQC1 790 aa12.94□□□□□ -0.34
PTPRK-216ENST00000524481 HDAC6Q9UBN7 1215 aa12.94□□□□□ -0.34
PTPRK-216ENST00000524481 GABBR1Q9UBS5 961 aa12.94□□□□□ -0.34
PTPRK-216ENST00000524481 PGAP2Q9UHJ9 254 aa12.94□□□□□ -0.34
PTPRK-216ENST00000524481 XRCC5P13010 732 aaKnown RBP12.94□□□□□ -0.34
PTPRK-216ENST00000524481 MARK3P27448 753 aa12.94□□□□□ -0.34
PTPRK-216ENST00000524481 PBX1P40424 430 aa12.94□□□□□ -0.34
PTPRK-216ENST00000524481 MRPS25P82663 173 aaKnown RBP12.94□□□□□ -0.34
PTPRK-216ENST00000524481 PSMD2Q13200 908 aa12.94□□□□□ -0.34
PTPRK-216ENST00000524481 PGM5Q15124 567 aa12.94□□□□□ -0.34
PTPRK-216ENST00000524481 ARHGAP44Q17R89 818 aa12.94□□□□□ -0.34
PTPRK-216ENST00000524481 TRIM65Q6PJ69 517 aa12.94□□□□□ -0.34
PTPRK-216ENST00000524481 FAM133AQ8N9E0 248 aa12.94□□□□□ -0.34
PTPRK-216ENST00000524481 PDCD2LQ9BRP1 358 aa12.94□□□□□ -0.34
PTPRK-216ENST00000524481 TNS1Q9HBL0 1735 aaKnown RBP12.94□□□□□ -0.34
PTPRK-216ENST00000524481 KIF2AO00139 706 aaPredicted RBP12.93□□□□□ -0.34
PTPRK-216ENST00000524481 PIK3CDO00329 1044 aa12.93□□□□□ -0.34
PTPRK-216ENST00000524481 TBX3O15119 743 aa12.93□□□□□ -0.34
PTPRK-216ENST00000524481 CIITAP33076 1130 aa12.93□□□□□ -0.34
PTPRK-216ENST00000524481 EIF4A3P38919 411 aaKnown RBP12.93□□□□□ -0.34
PTPRK-216ENST00000524481 UGCGQ16739 394 aa12.93□□□□□ -0.34
PTPRK-216ENST00000524481 MCTP2Q6DN12 878 aa12.93□□□□□ -0.34
PTPRK-216ENST00000524481 CEP170P1Q96L14 293 aa12.93□□□□□ -0.34
PTPRK-216ENST00000524481 DLEC1Q9Y238 1755 aa12.93□□□□□ -0.34
PTPRK-216ENST00000524481 FANCGO15287 622 aa12.93□□□□□ -0.34
PTPRK-216ENST00000524481 USP2O75604 605 aaPredicted RBP12.93□□□□□ -0.34
PTPRK-216ENST00000524481 AKAP3O75969 853 aa12.93□□□□□ -0.34
PTPRK-216ENST00000524481 NR3C1P04150 777 aa12.93□□□□□ -0.34
PTPRK-216ENST00000524481 YBX3P16989 372 aaKnown RBP eCLIP12.93□□□□□ -0.34
PTPRK-216ENST00000524481 GFPT1Q06210 699 aaPredicted RBP12.93□□□□□ -0.34
PTPRK-216ENST00000524481 MTERF2Q49AM1 385 aa12.93□□□□□ -0.34
PTPRK-216ENST00000524481 ZNF507Q8TCN5 953 aa12.93□□□□□ -0.34
PTPRK-216ENST00000524481 CRYGNQ8WXF5 182 aa12.93□□□□□ -0.34
PTPRK-216ENST00000524481 R3HDMLQ9H3Y0 253 aa12.93□□□□□ -0.34
PTPRK-216ENST00000524481 RHOXF2BP0C7M4 288 aa12.93□□□□□ -0.34
PTPRK-216ENST00000524481 CXCR5P32302 372 aa12.93□□□□□ -0.34
PTPRK-216ENST00000524481 MAP1SQ66K74 1059 aaPredicted RBP12.93□□□□□ -0.34
PTPRK-216ENST00000524481 ZNF710Q8N1W2 664 aa12.93□□□□□ -0.34
PTPRK-216ENST00000524481 BICD1Q96G01 975 aa12.93□□□□□ -0.34
PTPRK-216ENST00000524481 RHOXF2Q9BQY4 288 aa12.93□□□□□ -0.34
PTPRK-216ENST00000524481 SEPT9Q9UHD8 586 aaPredicted RBP12.93□□□□□ -0.34
PTPRK-216ENST00000524481 ADAMTS1Q9UHI8 967 aa12.93□□□□□ -0.34
PTPRK-216ENST00000524481 DNAH12Q6ZR08 3092 aa12.93□□□□□ -0.34
PTPRK-216ENST00000524481 YWHABP31946 246 aaKnown RBP12.92□□□□□ -0.34
PTPRK-216ENST00000524481 CYLC1P35663 651 aaPredicted RBP12.92□□□□□ -0.34
PTPRK-216ENST00000524481 QARSP47897 775 aaKnown RBP12.92□□□□□ -0.34
PTPRK-216ENST00000524481 PDE4CQ08493 712 aa12.92□□□□□ -0.34
PTPRK-216ENST00000524481 NCBP1Q09161 790 aaKnown RBP12.92□□□□□ -0.34
PTPRK-216ENST00000524481 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.92□□□□□ -0.34
PTPRK-216ENST00000524481 CAGE1Q8TC20 777 aa12.92□□□□□ -0.34
PTPRK-216ENST00000524481 PPP1R16BQ96T49 567 aa12.92□□□□□ -0.34
PTPRK-216ENST00000524481 LACRTQ9GZZ8 138 aa12.92□□□□□ -0.34
PTPRK-216ENST00000524481 A1CFQ9NQ94 594 aaKnown RBP12.92□□□□□ -0.34
PTPRK-216ENST00000524481 PXMP2Q9NR77 195 aa12.92□□□□□ -0.34
PTPRK-216ENST00000524481 CAPN11Q9UMQ6 739 aa12.92□□□□□ -0.34
PTPRK-216ENST00000524481 EPB41P11171 864 aaKnown RBP12.92□□□□□ -0.34
PTPRK-216ENST00000524481 NF2P35240 595 aa12.92□□□□□ -0.34
PTPRK-216ENST00000524481 PPP1R2P41236 205 aa12.92□□□□□ -0.34
PTPRK-216ENST00000524481 MAP3K9P80192 1104 aa12.92□□□□□ -0.34
PTPRK-216ENST00000524481 EPHA7Q15375 998 aa12.92□□□□□ -0.34
PTPRK-216ENST00000524481 WDR59Q6PJI9 974 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms