RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 NME8Q8N427 588 aa19.12■□□□□ 0.65
SPIDR-221ENST00000523814 TRAPPC12Q8WVT3 735 aa19.12■□□□□ 0.65
SPIDR-221ENST00000523814 FAM49AQ9H0Q0 323 aaPredicted RBP19.12■□□□□ 0.65
SPIDR-221ENST00000523814 AGO3Q9H9G7 860 aaKnown RBP19.12■□□□□ 0.65
SPIDR-221ENST00000523814 SMIM35A0A1B0GVV1 85 aa19.11■□□□□ 0.65
SPIDR-221ENST00000523814 IPO5O00410 1097 aaKnown RBP19.11■□□□□ 0.65
SPIDR-221ENST00000523814 PSMA5P28066 241 aa19.11■□□□□ 0.65
SPIDR-221ENST00000523814 GPM6BQ13491 265 aa19.11■□□□□ 0.65
SPIDR-221ENST00000523814 MTHFD1LQ6UB35 978 aa19.11■□□□□ 0.65
SPIDR-221ENST00000523814 RTN4RL1Q86UN2 441 aaPredicted RBP19.11■□□□□ 0.65
SPIDR-221ENST00000523814 CRIPAKQ8N1N5 446 aa19.11■□□□□ 0.65
SPIDR-221ENST00000523814 FIBCD1Q8N539 461 aa19.11■□□□□ 0.65
SPIDR-221ENST00000523814 TCF20Q9UGU0 1960 aaKnown RBP19.1■□□□□ 0.65
SPIDR-221ENST00000523814 KDM3AQ9Y4C1 1321 aa19.1■□□□□ 0.65
SPIDR-221ENST00000523814 HBP1O60381 514 aa19.1■□□□□ 0.65
SPIDR-221ENST00000523814 RB1P06400 928 aa19.1■□□□□ 0.65
SPIDR-221ENST00000523814 LINC00271P0C7V0 271 aa19.1■□□□□ 0.65
SPIDR-221ENST00000523814 GNA11P29992 359 aa19.1■□□□□ 0.65
SPIDR-221ENST00000523814 CD52P31358 61 aa19.1■□□□□ 0.65
SPIDR-221ENST00000523814 FAM160B1Q5W0V3 765 aa19.1■□□□□ 0.65
SPIDR-221ENST00000523814 REXO1Q8N1G1 1221 aaKnown RBP19.1■□□□□ 0.65
SPIDR-221ENST00000523814 ATP8B4Q8TF62 1192 aa19.1■□□□□ 0.65
SPIDR-221ENST00000523814 ZNF689Q96CS4 500 aaPredicted RBP19.1■□□□□ 0.65
SPIDR-221ENST00000523814 FTHL17Q9BXU8 183 aa19.1■□□□□ 0.65
SPIDR-221ENST00000523814 CELF4Q9BZC1 486 aaKnown RBP19.1■□□□□ 0.65
SPIDR-221ENST00000523814 UBE2ZQ9H832 354 aaPredicted RBP19.1■□□□□ 0.65
SPIDR-221ENST00000523814 RC3H2Q9HBD1 1191 aaKnown RBP19.1■□□□□ 0.65
SPIDR-221ENST00000523814 TBC1D22BQ9NU19 505 aa19.1■□□□□ 0.65
SPIDR-221ENST00000523814 TRPV2Q9Y5S1 764 aa19.1■□□□□ 0.65
SPIDR-221ENST00000523814 IGSF9BQ9UPX0 1349 aa19.09■□□□□ 0.65
SPIDR-221ENST00000523814 C5orf67F2Z3F1 127 aa19.09■□□□□ 0.65
SPIDR-221ENST00000523814 M0QZ92 97 aa19.09■□□□□ 0.65
SPIDR-221ENST00000523814 DDX39AO00148 427 aaKnown RBP19.09■□□□□ 0.65
SPIDR-221ENST00000523814 BACH1O14867 736 aa19.09■□□□□ 0.65
SPIDR-221ENST00000523814 EPB41L2O43491 1005 aaKnown RBP19.09■□□□□ 0.65
SPIDR-221ENST00000523814 DGKIO75912 1065 aa19.09■□□□□ 0.65
SPIDR-221ENST00000523814 KLRC1P26715 233 aa19.09■□□□□ 0.65
SPIDR-221ENST00000523814 PDIA3P30101 505 aaKnown RBP19.09■□□□□ 0.65
SPIDR-221ENST00000523814 BMPR1AP36894 532 aa19.09■□□□□ 0.65
SPIDR-221ENST00000523814 TMEM62Q0P6H9 643 aa19.09■□□□□ 0.65
SPIDR-221ENST00000523814 SWSAP1Q6NVH7 229 aa19.09■□□□□ 0.65
SPIDR-221ENST00000523814 MIS18BP1Q6P0N0 1132 aa19.09■□□□□ 0.65
SPIDR-221ENST00000523814 FAM43BQ6ZT52 329 aaPredicted RBP19.09■□□□□ 0.65
SPIDR-221ENST00000523814 CLP1Q92989 425 aaKnown RBP19.09■□□□□ 0.65
SPIDR-221ENST00000523814 PHKBQ93100 1093 aa19.09■□□□□ 0.65
SPIDR-221ENST00000523814 ZNF577Q9BSK1 485 aa19.09■□□□□ 0.65
SPIDR-221ENST00000523814 RNF26Q9BY78 433 aaPredicted RBP19.09■□□□□ 0.65
SPIDR-221ENST00000523814 ZNF302Q9NR11 478 aa19.09■□□□□ 0.65
SPIDR-221ENST00000523814 PADI3Q9ULW8 664 aa19.09■□□□□ 0.65
SPIDR-221ENST00000523814 IFNAR1P17181 557 aa19.08■□□□□ 0.64
SPIDR-221ENST00000523814 CIITAP33076 1130 aa19.08■□□□□ 0.64
SPIDR-221ENST00000523814 KRT76Q01546 638 aa19.08■□□□□ 0.64
SPIDR-221ENST00000523814 AKAP17AQ02040 695 aaKnown RBP19.08■□□□□ 0.64
SPIDR-221ENST00000523814 LEXMQ3ZCV2 418 aa19.08■□□□□ 0.64
SPIDR-221ENST00000523814 TIGD5Q53EQ6 642 aa19.08■□□□□ 0.64
SPIDR-221ENST00000523814 ZNF484Q5JVG2 852 aa19.08■□□□□ 0.64
SPIDR-221ENST00000523814 ZNF746Q6NUN9 644 aaPredicted RBP19.08■□□□□ 0.64
SPIDR-221ENST00000523814 PDXDC2PQ6P474 469 aa19.08■□□□□ 0.64
SPIDR-221ENST00000523814 CCDC60Q8IWA6 550 aaPredicted RBP19.08■□□□□ 0.64
SPIDR-221ENST00000523814 KIAA0319LQ8IZA0 1049 aa19.08■□□□□ 0.64
SPIDR-221ENST00000523814 BANK1Q8NDB2 785 aa19.08■□□□□ 0.64
SPIDR-221ENST00000523814 BICD2Q8TD16 824 aa19.08■□□□□ 0.64
SPIDR-221ENST00000523814 LINC01599Q8WXQ3 324 aa19.08■□□□□ 0.64
SPIDR-221ENST00000523814 RWDD3Q9Y3V2 267 aa19.08■□□□□ 0.64
SPIDR-221ENST00000523814 COL1A2P08123 1366 aa19.07■□□□□ 0.64
SPIDR-221ENST00000523814 ADGRA3Q8IWK6 1321 aa19.07■□□□□ 0.64
SPIDR-221ENST00000523814 ZBTB42B2RXF5 422 aa19.07■□□□□ 0.64
SPIDR-221ENST00000523814 ATP4AP20648 1035 aa19.07■□□□□ 0.64
SPIDR-221ENST00000523814 SETQ01105 290 aaPredicted RBP19.07■□□□□ 0.64
SPIDR-221ENST00000523814 COL19A1Q14993 1142 aa19.07■□□□□ 0.64
SPIDR-221ENST00000523814 RUFY3Q7L099 469 aa19.07■□□□□ 0.64
SPIDR-221ENST00000523814 ZSWIM6Q9HCJ5 1215 aa19.07■□□□□ 0.64
SPIDR-221ENST00000523814 SH3GLB2Q9NR46 395 aa19.07■□□□□ 0.64
SPIDR-221ENST00000523814 MAFBQ9Y5Q3 323 aaPredicted RBP19.07■□□□□ 0.64
SPIDR-221ENST00000523814 TTC3P53804 2025 aa19.07■□□□□ 0.64
SPIDR-221ENST00000523814 CTNNB1P35222 781 aa19.06■□□□□ 0.64
SPIDR-221ENST00000523814 PAK2Q13177 524 aa19.06■□□□□ 0.64
SPIDR-221ENST00000523814 BTG3Q14201 252 aaPredicted RBP19.06■□□□□ 0.64
SPIDR-221ENST00000523814 SMAP1Q8IYB5 467 aaPredicted RBP19.06■□□□□ 0.64
SPIDR-221ENST00000523814 CCDC148Q8NFR7 591 aa19.06■□□□□ 0.64
SPIDR-221ENST00000523814 UIMC1Q96RL1 719 aa19.06■□□□□ 0.64
SPIDR-221ENST00000523814 C11orf84Q9BUA3 381 aaPredicted RBP19.06■□□□□ 0.64
SPIDR-221ENST00000523814 SLC26A6Q9BXS9 759 aa19.06■□□□□ 0.64
SPIDR-221ENST00000523814 EDIL3O43854 480 aa19.05■□□□□ 0.64
SPIDR-221ENST00000523814 PPFIA3O75145 1194 aa19.05■□□□□ 0.64
SPIDR-221ENST00000523814 KCNA5P22460 613 aa19.05■□□□□ 0.64
SPIDR-221ENST00000523814 USP11P51784 963 aa19.05■□□□□ 0.64
SPIDR-221ENST00000523814 CCT2P78371 535 aaKnown RBP19.05■□□□□ 0.64
SPIDR-221ENST00000523814 TOB2Q14106 344 aaPredicted RBP19.05■□□□□ 0.64
SPIDR-221ENST00000523814 PRR16Q569H4 304 aa19.05■□□□□ 0.64
SPIDR-221ENST00000523814 NPAS4Q8IUM7 802 aa19.05■□□□□ 0.64
SPIDR-221ENST00000523814 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.05■□□□□ 0.64
SPIDR-221ENST00000523814 NEK9Q8TD19 979 aa19.05■□□□□ 0.64
SPIDR-221ENST00000523814 RASGRP4Q8TDF6 673 aa19.05■□□□□ 0.64
SPIDR-221ENST00000523814 BBXQ8WY36 941 aaPredicted RBP19.05■□□□□ 0.64
SPIDR-221ENST00000523814 LENG9Q96B70 501 aa19.05■□□□□ 0.64
SPIDR-221ENST00000523814 PLVAPQ9BX97 442 aa19.05■□□□□ 0.64
SPIDR-221ENST00000523814 LMAN2LQ9H0V9 348 aa19.05■□□□□ 0.64
SPIDR-221ENST00000523814 TMX1Q9H3N1 280 aa19.05■□□□□ 0.64
SPIDR-221ENST00000523814 NSUN3Q9H649 340 aaKnown RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms