RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 SPDYE3A6NKU9 549 aa26.04■■□□□ 1.76
PVT1-218ENST00000523328 PRC1O43663 620 aa26.04■■□□□ 1.76
PVT1-218ENST00000523328 STAG3L1P0CL83 205 aa26.04■■□□□ 1.76
PVT1-218ENST00000523328 SCG2P13521 617 aa26.04■■□□□ 1.76
PVT1-218ENST00000523328 RXRAP19793 462 aa26.04■■□□□ 1.76
PVT1-218ENST00000523328 GATMP50440 423 aa26.04■■□□□ 1.76
PVT1-218ENST00000523328 COASYQ13057 564 aa26.04■■□□□ 1.76
PVT1-218ENST00000523328 COL9A3Q14050 684 aaPredicted RBP26.04■■□□□ 1.76
PVT1-218ENST00000523328 CASC1Q6TDU7 716 aa26.04■■□□□ 1.76
PVT1-218ENST00000523328 TRAPPC12Q8WVT3 735 aa26.04■■□□□ 1.76
PVT1-218ENST00000523328 POF1BQ8WVV4 589 aa26.04■■□□□ 1.76
PVT1-218ENST00000523328 TMX1Q9H3N1 280 aa26.04■■□□□ 1.76
PVT1-218ENST00000523328 PCDHA2Q9Y5H9 948 aa26.04■■□□□ 1.76
PVT1-218ENST00000523328 RBM8AQ9Y5S9 174 aaKnown RBP26.04■■□□□ 1.76
PVT1-218ENST00000523328 hCG_1642624A0A1W2PR95 340 aa26.03■■□□□ 1.76
PVT1-218ENST00000523328 M0QZ92 97 aa26.03■■□□□ 1.76
PVT1-218ENST00000523328 SH2B2O14492 632 aaPredicted RBP26.03■■□□□ 1.76
PVT1-218ENST00000523328 GLP2RO95838 553 aa26.03■■□□□ 1.76
PVT1-218ENST00000523328 PAK2Q13177 524 aa26.03■■□□□ 1.76
PVT1-218ENST00000523328 PLCB4Q15147 1175 aa26.03■■□□□ 1.76
PVT1-218ENST00000523328 BMP8AQ7Z5Y6 402 aa26.03■■□□□ 1.76
PVT1-218ENST00000523328 CELF4Q9BZC1 486 aaKnown RBP26.03■■□□□ 1.76
PVT1-218ENST00000523328 AZI2Q9H6S1 392 aa26.03■■□□□ 1.76
PVT1-218ENST00000523328 KCNH7Q9NS40 1196 aa26.03■■□□□ 1.76
PVT1-218ENST00000523328 TRPC6Q9Y210 931 aa26.03■■□□□ 1.76
PVT1-218ENST00000523328 KDM3AQ9Y4C1 1321 aa26.03■■□□□ 1.76
PVT1-218ENST00000523328 LOC730098B7Z3J9 87 aa26.02■■□□□ 1.76
PVT1-218ENST00000523328 NRIP1P48552 1158 aa26.02■■□□□ 1.76
PVT1-218ENST00000523328 NFXL1Q6ZNB6 911 aa26.02■■□□□ 1.76
PVT1-218ENST00000523328 PLPPR4Q7Z2D5 763 aa26.02■■□□□ 1.76
PVT1-218ENST00000523328 TMTC2Q8N394 836 aa26.02■■□□□ 1.76
PVT1-218ENST00000523328 PCDHGC5Q9Y5F6 944 aa26.02■■□□□ 1.76
PVT1-218ENST00000523328 CCDC69A6NI79 296 aa26.01■■□□□ 1.75
PVT1-218ENST00000523328 RBM23Q86U06 439 aaKnown RBP26.01■■□□□ 1.75
PVT1-218ENST00000523328 CYP2W1Q8TAV3 490 aa26.01■■□□□ 1.75
PVT1-218ENST00000523328 EVPLQ92817 2033 aa26.01■■□□□ 1.75
PVT1-218ENST00000523328 TNPO1Q92973 898 aaKnown RBP26.01■■□□□ 1.75
PVT1-218ENST00000523328 TMEM87BQ96K49 555 aa26.01■■□□□ 1.75
PVT1-218ENST00000523328 MXRA8Q9BRK3 442 aa26.01■■□□□ 1.75
PVT1-218ENST00000523328 BARX2Q9UMQ3 279 aaPredicted RBP26.01■■□□□ 1.75
PVT1-218ENST00000523328 ZDBF2Q9HCK1 2354 aa26■■□□□ 1.75
PVT1-218ENST00000523328 NFASCO94856 1347 aa26■■□□□ 1.75
PVT1-218ENST00000523328 SMIM35A0A1B0GVV1 85 aa26■■□□□ 1.75
PVT1-218ENST00000523328 MCM5P33992 734 aa26■■□□□ 1.75
PVT1-218ENST00000523328 LIFRP42702 1097 aa26■■□□□ 1.75
PVT1-218ENST00000523328 ACTR2P61160 394 aa26■■□□□ 1.75
PVT1-218ENST00000523328 CBX2Q14781 532 aaPredicted RBP26■■□□□ 1.75
PVT1-218ENST00000523328 TRIM67Q6ZTA4 783 aa26■■□□□ 1.75
PVT1-218ENST00000523328 CCDC82Q8N4S0 544 aa26■■□□□ 1.75
PVT1-218ENST00000523328 CALM1P0DP23 149 aa25.99■■□□□ 1.75
PVT1-218ENST00000523328 CALM2P0DP24 149 aa25.99■■□□□ 1.75
PVT1-218ENST00000523328 CALM3P0DP25 149 aa25.99■■□□□ 1.75
PVT1-218ENST00000523328 SARSP49591 514 aaKnown RBP25.99■■□□□ 1.75
PVT1-218ENST00000523328 STAT5BP51692 787 aa25.99■■□□□ 1.75
PVT1-218ENST00000523328 KRT76Q01546 638 aa25.99■■□□□ 1.75
PVT1-218ENST00000523328 TMEM266Q2M3C6 531 aa25.99■■□□□ 1.75
PVT1-218ENST00000523328 MTHFD1LQ6UB35 978 aa25.99■■□□□ 1.75
PVT1-218ENST00000523328 TMTC3Q6ZXV5 915 aa25.99■■□□□ 1.75
PVT1-218ENST00000523328 RAB11FIP4Q86YS3 637 aa25.99■■□□□ 1.75
PVT1-218ENST00000523328 NME8Q8N427 588 aa25.99■■□□□ 1.75
PVT1-218ENST00000523328 PRSS33Q8NF86 280 aa25.99■■□□□ 1.75
PVT1-218ENST00000523328 LRFN2Q9ULH4 789 aa25.99■■□□□ 1.75
PVT1-218ENST00000523328 USP15Q9Y4E8 981 aaPredicted RBP25.99■■□□□ 1.75
PVT1-218ENST00000523328 KMT2EQ8IZD2 1858 aa25.98■■□□□ 1.75
PVT1-218ENST00000523328 TMEM221A6NGB7 291 aa25.98■■□□□ 1.75
PVT1-218ENST00000523328 M0R296 226 aa25.98■■□□□ 1.75
PVT1-218ENST00000523328 MGEA5O60502 916 aa25.98■■□□□ 1.75
PVT1-218ENST00000523328 ARP10275 920 aa25.98■■□□□ 1.75
PVT1-218ENST00000523328 ITGB3BPQ13352 177 aaPredicted RBP25.98■■□□□ 1.75
PVT1-218ENST00000523328 HEATR3Q7Z4Q2 680 aa25.98■■□□□ 1.75
PVT1-218ENST00000523328 PHOX2BQ99453 314 aa25.98■■□□□ 1.75
PVT1-218ENST00000523328 SDF4Q9BRK5 362 aa25.98■■□□□ 1.75
PVT1-218ENST00000523328 ERVK-5Q9HDB9 667 aa25.98■■□□□ 1.75
PVT1-218ENST00000523328 PPFIA3O75145 1194 aa25.97■■□□□ 1.75
PVT1-218ENST00000523328 ATG7O95352 703 aa25.97■■□□□ 1.75
PVT1-218ENST00000523328 ZXDAP98168 799 aa25.97■■□□□ 1.75
PVT1-218ENST00000523328 IER5LQ5T953 404 aa25.97■■□□□ 1.75
PVT1-218ENST00000523328 FANCBQ8NB91 859 aa25.97■■□□□ 1.75
PVT1-218ENST00000523328 PBXIP1Q96AQ6 731 aa25.97■■□□□ 1.75
PVT1-218ENST00000523328 IGKV6D-21A0A0A0MT36 114 aa25.96■■□□□ 1.75
PVT1-218ENST00000523328 RBM10P98175 930 aaKnown RBP25.96■■□□□ 1.75
PVT1-218ENST00000523328 UBE3AQ05086 875 aa25.96■■□□□ 1.75
PVT1-218ENST00000523328 NFX1Q12986 1120 aaKnown RBP25.96■■□□□ 1.75
PVT1-218ENST00000523328 ATP8B4Q8TF62 1192 aa25.96■■□□□ 1.75
PVT1-218ENST00000523328 PHF7Q9BWX1 381 aaPredicted RBP25.96■■□□□ 1.75
PVT1-218ENST00000523328 TLE6Q9H808 572 aa25.96■■□□□ 1.75
PVT1-218ENST00000523328 PCDHB7Q9Y5E2 793 aa25.96■■□□□ 1.75
PVT1-218ENST00000523328 SLC12A7Q9Y666 1083 aa25.96■■□□□ 1.75
PVT1-218ENST00000523328 PER2O15055 1255 aa25.95■■□□□ 1.74
PVT1-218ENST00000523328 KLRC1P26715 233 aa25.95■■□□□ 1.74
PVT1-218ENST00000523328 SLC26A2P50443 739 aa25.95■■□□□ 1.74
PVT1-218ENST00000523328 CEP55Q53EZ4 464 aa25.95■■□□□ 1.74
PVT1-218ENST00000523328 WWC2Q6AWC2 1192 aa25.95■■□□□ 1.74
PVT1-218ENST00000523328 TYW1BQ6NUM6 668 aa25.95■■□□□ 1.74
PVT1-218ENST00000523328 FAM43BQ6ZT52 329 aaPredicted RBP25.95■■□□□ 1.74
PVT1-218ENST00000523328 VN1R2Q8NFZ6 395 aa25.95■■□□□ 1.74
PVT1-218ENST00000523328 TMEM40Q8WWA1 233 aa25.95■■□□□ 1.74
PVT1-218ENST00000523328 PGBD1Q96JS3 809 aa25.95■■□□□ 1.74
PVT1-218ENST00000523328 CDHR5Q9HBB8 845 aa25.95■■□□□ 1.74
PVT1-218ENST00000523328 AGO4Q9HCK5 861 aaKnown RBP25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms