RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-225	ENST00000523288	PTDSS1	P48651	473 aa	Known RBP	4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	PPP2R2A	P63151	447 aa		4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	GSTO1	P78417	241 aa		4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	FLII	Q13045	1269 aa		4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	HNRNPD	Q14103	355 aa	Known RBP	4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	NECTIN1	Q15223	517 aa		4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	INF2	Q27J81	1249 aa		4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	NELFCD	Q8IXH7	590 aa		4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	IFT20	Q8IY31	132 aa		4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	NIM1K	Q8IY84	436 aa		4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	SLC35F6	Q8N357	371 aa		4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	RNF10	Q8N5U6	811 aa	Known RBP	4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	NKX2-3	Q8TAU0	364 aa		4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	CHMP6	Q96FZ7	201 aa		4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	ZNF317	Q96PQ6	595 aa	Predicted RBP	4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	TMEM109	Q9BVC6	243 aa		4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	LRMDA	Q9H2I8	198 aa		4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	ZDHHC7	Q9NXF8	308 aa		4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	PPP1R9A	Q9ULJ8	1098 aa		4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	PADI4	Q9UM07	663 aa		4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	NOSIP	Q9Y314	301 aa	Known RBP	4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	SAR1B	Q9Y6B6	198 aa		4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	IVNS1ABP	Q9Y6Y0	642 aa		4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	CSMD1	Q96PZ7	3565 aa		4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	ANKRD36C	Q5JPF3	1778 aa		4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	PCDH11X	Q9BZA7	1347 aa		4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	PCDH11Y	Q9BZA8	1340 aa		4.18	□□□□□ -1.74
FAM49B-225	ENST00000523288	PVALEF	A0A1B0GWK0	134 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	GOLGA8T	H3BQL2	631 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288		H7C1D1	291 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	OPLAH	O14841	1288 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	LCA5L	O95447	670 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	GOLGA8H	P0CJ92	632 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	RGS2	P41220	211 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	ACADSB	P45954	432 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	EIF3B	P55884	814 aa	Known RBP	4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	RCN1	Q15293	331 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	DIXDC1	Q155Q3	683 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	SLC44A4	Q53GD3	710 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	SMUG1	Q53HV7	270 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	NDUFAF5	Q5TEU4	345 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	MFSD4B	Q5TF39	518 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	GALNT17	Q6IS24	598 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	TMC4	Q7Z404	712 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	BPHL	Q86WA6	291 aa	Predicted RBP	4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	RHOT2	Q8IXI1	618 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	SYMPK	Q92797	1274 aa	Known RBP	4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	BIRC8	Q96P09	236 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	ZIM3	Q96PE6	472 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	XPO6	Q96QU8	1125 aa	Known RBP	4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	SENP7	Q9BQF6	1050 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	PARVG	Q9HBI0	331 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	METTL14	Q9HCE5	456 aa	Known RBP	4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	SEPT11	Q9NVA2	429 aa	Known RBP	4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	G3BP2	Q9UN86	482 aa	Known RBP	4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	SCAF8	Q9UPN6	1271 aa	Known RBP	4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	SNX9	Q9Y5X1	595 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	STRC	Q7RTU9	1775 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	SOBP	A7XYQ1	873 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	CSDE1	O75534	798 aa	Known RBP	4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	UFL1	O94874	794 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	RHOXF2B	P0C7M4	288 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	RPS6KB1	P23443	525 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	CCNC	P24863	283 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	COPS2	P61201	443 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	ATP6V0D1	P61421	351 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	CUL1	Q13616	776 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	ZNF569	Q5MCW4	686 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	DPP8	Q6V1X1	898 aa	Predicted RBP	4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	KRT27	Q7Z3Y8	459 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	NUP93	Q8N1F7	819 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	FNDC8	Q8TC99	324 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	DCAF5	Q96JK2	942 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	ZMAT2	Q96NC0	199 aa	Known RBP	4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	RHOXF2	Q9BQY4	288 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	CRNKL1	Q9BZJ0	848 aa	Known RBP	4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	RNF41	Q9H4P4	317 aa	Predicted RBP	4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	C12orf10	Q9HB07	376 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	PRKAG3	Q9UGI9	489 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	PUF60	Q9UHX1	559 aa	Known RBP	4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	N6AMT1	Q9Y5N5	214 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	CPD	O75976	1380 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	PNPLA7	Q6ZV29	1317 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	TRIM43B	A6NCK2	446 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	KMO	O15229	486 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	SERPINB7	O75635	380 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	GFPT2	O94808	682 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	LARGE1	O95461	756 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	CHGB	P05060	677 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	VHL	P40337	213 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	MSH2	P43246	934 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	CDK7	P50613	346 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	AP1B1	Q10567	949 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	MSLN	Q13421	630 aa	Predicted RBP	4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	KRT32	Q14532	448 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	SF3B3	Q15393	1217 aa	Known RBP	4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	USP41	Q3LFD5	358 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	TNFAIP8L3	Q5GJ75	292 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	USPL1	Q5W0Q7	1092 aa		4.17	□□□□□ -1.74
FAM49B-225	ENST00000523288	PCNX4	Q63HM2	1172 aa		4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms