RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 M0QZ92 97 aa18.39■□□□□ 0.53
CLN8-206ENST00000523237 RFXAPO00287 272 aa18.39■□□□□ 0.53
CLN8-206ENST00000523237 GTPBP6O43824 516 aaPredicted RBP18.39■□□□□ 0.53
CLN8-206ENST00000523237 MRPS6P82932 125 aaKnown RBP18.39■□□□□ 0.53
CLN8-206ENST00000523237 CCDC85BQ15834 202 aaPredicted RBP18.39■□□□□ 0.53
CLN8-206ENST00000523237 SWSAP1Q6NVH7 229 aa18.39■□□□□ 0.53
CLN8-206ENST00000523237 BLIDQ8IZY5 108 aa18.39■□□□□ 0.53
CLN8-206ENST00000523237 DAGLBQ8NCG7 672 aa18.39■□□□□ 0.53
CLN8-206ENST00000523237 TBCKQ8TEA7 893 aa18.39■□□□□ 0.53
CLN8-206ENST00000523237 ATP8B4Q8TF62 1192 aa18.39■□□□□ 0.53
CLN8-206ENST00000523237 TRAPPC12Q8WVT3 735 aa18.39■□□□□ 0.53
CLN8-206ENST00000523237 LENG9Q96B70 501 aa18.39■□□□□ 0.53
CLN8-206ENST00000523237 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.38■□□□□ 0.53
CLN8-206ENST00000523237 EPOPA6NHQ4 379 aa18.38■□□□□ 0.53
CLN8-206ENST00000523237 PFKFB2O60825 505 aa18.38■□□□□ 0.53
CLN8-206ENST00000523237 PSAPP07602 524 aa18.38■□□□□ 0.53
CLN8-206ENST00000523237 POU3F3P20264 500 aaPredicted RBP18.38■□□□□ 0.53
CLN8-206ENST00000523237 HTRA4P83105 476 aaPredicted RBP18.38■□□□□ 0.53
CLN8-206ENST00000523237 LPIN1Q14693 890 aa18.38■□□□□ 0.53
CLN8-206ENST00000523237 FBXO47Q5MNV8 452 aa18.38■□□□□ 0.53
CLN8-206ENST00000523237 MTHFD1LQ6UB35 978 aa18.38■□□□□ 0.53
CLN8-206ENST00000523237 TSHZ1Q6ZSZ6 1077 aa18.38■□□□□ 0.53
CLN8-206ENST00000523237 CKAP2LQ8IYA6 745 aa18.38■□□□□ 0.53
CLN8-206ENST00000523237 TOP1MTQ969P6 601 aa18.38■□□□□ 0.53
CLN8-206ENST00000523237 AIFM3Q96NN9 605 aa18.38■□□□□ 0.53
CLN8-206ENST00000523237 TGS1Q96RS0 853 aaKnown RBP18.38■□□□□ 0.53
CLN8-206ENST00000523237 TPCN1Q9ULQ1 816 aa18.38■□□□□ 0.53
CLN8-206ENST00000523237 SAMM50Q9Y512 469 aa18.38■□□□□ 0.53
CLN8-206ENST00000523237 PCDHA10Q9Y5I2 948 aa18.38■□□□□ 0.53
CLN8-206ENST00000523237 EVPLQ92817 2033 aa18.38■□□□□ 0.53
CLN8-206ENST00000523237 COL1A2P08123 1366 aa18.38■□□□□ 0.53
CLN8-206ENST00000523237 SMIM35A0A1B0GVV1 85 aa18.37■□□□□ 0.53
CLN8-206ENST00000523237 LINC01553A4QN01 128 aa18.37■□□□□ 0.53
CLN8-206ENST00000523237 M0R2N6 131 aa18.37■□□□□ 0.53
CLN8-206ENST00000523237 XBP1P17861 261 aa18.37■□□□□ 0.53
CLN8-206ENST00000523237 KLRC1P26715 233 aa18.37■□□□□ 0.53
CLN8-206ENST00000523237 AK2P54819 239 aa18.37■□□□□ 0.53
CLN8-206ENST00000523237 ZNF484Q5JVG2 852 aa18.37■□□□□ 0.53
CLN8-206ENST00000523237 SPRED2Q7Z698 418 aa18.37■□□□□ 0.53
CLN8-206ENST00000523237 MICALL1Q8N3F8 863 aa18.37■□□□□ 0.53
CLN8-206ENST00000523237 NME8Q8N427 588 aa18.37■□□□□ 0.53
CLN8-206ENST00000523237 IL17RAQ96F46 866 aa18.37■□□□□ 0.53
CLN8-206ENST00000523237 RIT2Q99578 217 aa18.37■□□□□ 0.53
CLN8-206ENST00000523237 MAFBQ9Y5Q3 323 aaPredicted RBP18.37■□□□□ 0.53
CLN8-206ENST00000523237 TRPV2Q9Y5S1 764 aa18.37■□□□□ 0.53
CLN8-206ENST00000523237 MTCH2Q9Y6C9 303 aa18.37■□□□□ 0.53
CLN8-206ENST00000523237 SQORQ9Y6N5 450 aa18.37■□□□□ 0.53
CLN8-206ENST00000523237 STK36Q9NRP7 1315 aa18.37■□□□□ 0.53
CLN8-206ENST00000523237 WDR64B1ANS9 1081 aa18.36■□□□□ 0.53
CLN8-206ENST00000523237 MSH4O15457 936 aa18.36■□□□□ 0.53
CLN8-206ENST00000523237 EDIL3O43854 480 aa18.36■□□□□ 0.53
CLN8-206ENST00000523237 UPP2O95045 317 aa18.36■□□□□ 0.53
CLN8-206ENST00000523237 ERVK-21P61565 698 aa18.36■□□□□ 0.53
CLN8-206ENST00000523237 NONOQ15233 471 aaKnown RBP eCLIP18.36■□□□□ 0.53
CLN8-206ENST00000523237 NPY5RQ15761 445 aa18.36■□□□□ 0.53
CLN8-206ENST00000523237 NLRC5Q86WI3 1866 aa18.36■□□□□ 0.53
CLN8-206ENST00000523237 BBXQ8WY36 941 aaPredicted RBP18.36■□□□□ 0.53
CLN8-206ENST00000523237 YME1L1Q96TA2 773 aa18.36■□□□□ 0.53
CLN8-206ENST00000523237 COL25A1Q9BXS0 654 aaPredicted RBP18.36■□□□□ 0.53
CLN8-206ENST00000523237 TSPYL2Q9H2G4 693 aaPredicted RBP18.36■□□□□ 0.53
CLN8-206ENST00000523237 PRDM6Q9NQX0 595 aa18.36■□□□□ 0.53
CLN8-206ENST00000523237 THEGQ9P2T0 379 aa18.36■□□□□ 0.53
CLN8-206ENST00000523237 COL4A6Q14031 1691 aa18.35■□□□□ 0.53
CLN8-206ENST00000523237 GAS7O60861 476 aa18.35■□□□□ 0.53
CLN8-206ENST00000523237 ATP4AP20648 1035 aa18.35■□□□□ 0.53
CLN8-206ENST00000523237 TMEM62Q0P6H9 643 aa18.35■□□□□ 0.53
CLN8-206ENST00000523237 GRB10Q13322 594 aa18.35■□□□□ 0.53
CLN8-206ENST00000523237 Q4G0T1 1027 aa18.35■□□□□ 0.53
CLN8-206ENST00000523237 KRT25Q7Z3Z0 450 aa18.35■□□□□ 0.53
CLN8-206ENST00000523237 SP7Q8TDD2 431 aaPredicted RBP18.35■□□□□ 0.53
CLN8-206ENST00000523237 PHF20Q9BVI0 1012 aa18.35■□□□□ 0.53
CLN8-206ENST00000523237 TEKT3Q9BXF9 490 aa18.35■□□□□ 0.53
CLN8-206ENST00000523237 CELF4Q9BZC1 486 aaKnown RBP18.35■□□□□ 0.53
CLN8-206ENST00000523237 GABBR1Q9UBS5 961 aa18.35■□□□□ 0.53
CLN8-206ENST00000523237 MTUS1Q9ULD2 1270 aa18.35■□□□□ 0.53
CLN8-206ENST00000523237 KCNJ14Q9UNX9 436 aa18.35■□□□□ 0.53
CLN8-206ENST00000523237 IGSF9BQ9UPX0 1349 aa18.34■□□□□ 0.53
CLN8-206ENST00000523237 KDM3AQ9Y4C1 1321 aa18.34■□□□□ 0.53
CLN8-206ENST00000523237 SFNP31947 248 aa18.34■□□□□ 0.53
CLN8-206ENST00000523237 LRCH2Q5VUJ6 765 aa18.34■□□□□ 0.53
CLN8-206ENST00000523237 MOXD1Q6UVY6 613 aa18.34■□□□□ 0.53
CLN8-206ENST00000523237 GDPD5Q8WTR4 605 aa18.34■□□□□ 0.53
CLN8-206ENST00000523237 ATXN2LQ8WWM7 1075 aaKnown RBP18.34■□□□□ 0.53
CLN8-206ENST00000523237 WASF1Q92558 559 aa18.34■□□□□ 0.53
CLN8-206ENST00000523237 SLC5A5Q92911 643 aa18.34■□□□□ 0.53
CLN8-206ENST00000523237 FAM167AQ96KS9 214 aa18.34■□□□□ 0.53
CLN8-206ENST00000523237 AGO3Q9H9G7 860 aaKnown RBP18.34■□□□□ 0.53
CLN8-206ENST00000523237 DISC1Q9NRI5 854 aa18.34■□□□□ 0.53
CLN8-206ENST00000523237 CEP131Q9UPN4 1083 aa18.34■□□□□ 0.53
CLN8-206ENST00000523237 RALGAPA2Q2PPJ7 1873 aa18.34■□□□□ 0.53
CLN8-206ENST00000523237 PRRC2BQ5JSZ5 2229 aaKnown RBP18.34■□□□□ 0.53
CLN8-206ENST00000523237 CYP3A7-CYP3A51PA0A087WV96 503 aa18.33■□□□□ 0.52
CLN8-206ENST00000523237 ZBTB42B2RXF5 422 aa18.33■□□□□ 0.52
CLN8-206ENST00000523237 LPXNO60711 386 aa18.33■□□□□ 0.52
CLN8-206ENST00000523237 TDP2O95551 362 aa18.33■□□□□ 0.52
CLN8-206ENST00000523237 CYP3A7P24462 503 aa18.33■□□□□ 0.52
CLN8-206ENST00000523237 CD52P31358 61 aa18.33■□□□□ 0.52
CLN8-206ENST00000523237 JAK3P52333 1124 aa18.33■□□□□ 0.52
CLN8-206ENST00000523237 TJAP1Q5JTD0 557 aa18.33■□□□□ 0.52
CLN8-206ENST00000523237 TRMT1LQ7Z2T5 733 aaKnown RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms