RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 PCDHA2Q9Y5H9 948 aa21.2■□□□□ 0.98
SPIDR-220ENST00000522900 LINC01553A4QN01 128 aa21.19■□□□□ 0.98
SPIDR-220ENST00000522900 UPP2O95045 317 aa21.19■□□□□ 0.98
SPIDR-220ENST00000522900 CTDNEP1O95476 244 aa21.19■□□□□ 0.98
SPIDR-220ENST00000522900 KLRC1P26715 233 aa21.19■□□□□ 0.98
SPIDR-220ENST00000522900 SLC26A2P50443 739 aa21.19■□□□□ 0.98
SPIDR-220ENST00000522900 MRPS6P82932 125 aaKnown RBP21.19■□□□□ 0.98
SPIDR-220ENST00000522900 TMEM62Q0P6H9 643 aa21.19■□□□□ 0.98
SPIDR-220ENST00000522900 FBXO47Q5MNV8 452 aa21.19■□□□□ 0.98
SPIDR-220ENST00000522900 FAM160B1Q5W0V3 765 aa21.19■□□□□ 0.98
SPIDR-220ENST00000522900 ZNF746Q6NUN9 644 aaPredicted RBP21.19■□□□□ 0.98
SPIDR-220ENST00000522900 MICALL1Q8N3F8 863 aa21.19■□□□□ 0.98
SPIDR-220ENST00000522900 ATP8B4Q8TF62 1192 aa21.19■□□□□ 0.98
SPIDR-220ENST00000522900 TNPO1Q92973 898 aaKnown RBP21.19■□□□□ 0.98
SPIDR-220ENST00000522900 TOP1MTQ969P6 601 aa21.19■□□□□ 0.98
SPIDR-220ENST00000522900 AGO3Q9H9G7 860 aaKnown RBP21.19■□□□□ 0.98
SPIDR-220ENST00000522900 GJB4Q9NTQ9 266 aa21.19■□□□□ 0.98
SPIDR-220ENST00000522900 MTCH2Q9Y6C9 303 aa21.19■□□□□ 0.98
SPIDR-220ENST00000522900 ZBTB42B2RXF5 422 aa21.18■□□□□ 0.98
SPIDR-220ENST00000522900 HBP1O60381 514 aa21.18■□□□□ 0.98
SPIDR-220ENST00000522900 LPXNO60711 386 aa21.18■□□□□ 0.98
SPIDR-220ENST00000522900 HTRA4P83105 476 aaPredicted RBP21.18■□□□□ 0.98
SPIDR-220ENST00000522900 GRB10Q13322 594 aa21.18■□□□□ 0.98
SPIDR-220ENST00000522900 TRMT1LQ7Z2T5 733 aaKnown RBP21.18■□□□□ 0.98
SPIDR-220ENST00000522900 DAGLBQ8NCG7 672 aa21.18■□□□□ 0.98
SPIDR-220ENST00000522900 APBB2Q92870 758 aa21.18■□□□□ 0.98
SPIDR-220ENST00000522900 IL17RAQ96F46 866 aa21.18■□□□□ 0.98
SPIDR-220ENST00000522900 MTUS1Q9ULD2 1270 aa21.18■□□□□ 0.98
SPIDR-220ENST00000522900 INSL6Q9Y581 213 aa21.18■□□□□ 0.98
SPIDR-220ENST00000522900 MAFBQ9Y5Q3 323 aaPredicted RBP21.18■□□□□ 0.98
SPIDR-220ENST00000522900 TRANK1O15050 2925 aa21.17■□□□□ 0.98
SPIDR-220ENST00000522900 SMIM35A0A1B0GVV1 85 aa21.17■□□□□ 0.98
SPIDR-220ENST00000522900 TDP2O95551 362 aa21.17■□□□□ 0.98
SPIDR-220ENST00000522900 POU3F3P20264 500 aaPredicted RBP21.17■□□□□ 0.98
SPIDR-220ENST00000522900 KRT76Q01546 638 aa21.17■□□□□ 0.98
SPIDR-220ENST00000522900 NECAB1Q8N987 351 aa21.17■□□□□ 0.98
SPIDR-220ENST00000522900 GABBR1Q9UBS5 961 aa21.17■□□□□ 0.98
SPIDR-220ENST00000522900 PCDHA10Q9Y5I2 948 aa21.17■□□□□ 0.98
SPIDR-220ENST00000522900 ENPP3O14638 875 aa21.16■□□□□ 0.98
SPIDR-220ENST00000522900 LARGE1O95461 756 aa21.16■□□□□ 0.98
SPIDR-220ENST00000522900 PSAPP07602 524 aa21.16■□□□□ 0.98
SPIDR-220ENST00000522900 CD52P31358 61 aa21.16■□□□□ 0.98
SPIDR-220ENST00000522900 ERVK-21P61565 698 aa21.16■□□□□ 0.98
SPIDR-220ENST00000522900 IER5Q5VY09 327 aa21.16■□□□□ 0.98
SPIDR-220ENST00000522900 TSHZ1Q6ZSZ6 1077 aa21.16■□□□□ 0.98
SPIDR-220ENST00000522900 CKAP2LQ8IYA6 745 aa21.16■□□□□ 0.98
SPIDR-220ENST00000522900 SMAP1Q8IYB5 467 aaPredicted RBP21.16■□□□□ 0.98
SPIDR-220ENST00000522900 SLC5A5Q92911 643 aa21.16■□□□□ 0.98
SPIDR-220ENST00000522900 TGS1Q96RS0 853 aaKnown RBP21.16■□□□□ 0.98
SPIDR-220ENST00000522900 PHF20Q9BVI0 1012 aa21.16■□□□□ 0.98
SPIDR-220ENST00000522900 SUGCTQ9HAC7 445 aa21.16■□□□□ 0.98
SPIDR-220ENST00000522900 CDHR5Q9HBB8 845 aa21.16■□□□□ 0.98
SPIDR-220ENST00000522900 SAMM50Q9Y512 469 aa21.16■□□□□ 0.98
SPIDR-220ENST00000522900 TRPV2Q9Y5S1 764 aa21.16■□□□□ 0.98
SPIDR-220ENST00000522900 REV3LO60673 3130 aa21.15■□□□□ 0.98
SPIDR-220ENST00000522900 CYP3A7-CYP3A51PA0A087WV96 503 aa21.15■□□□□ 0.98
SPIDR-220ENST00000522900 CDKL5O76039 1030 aa21.15■□□□□ 0.98
SPIDR-220ENST00000522900 CYP3A7P24462 503 aa21.15■□□□□ 0.98
SPIDR-220ENST00000522900 ANKRD1Q15327 319 aa21.15■□□□□ 0.98
SPIDR-220ENST00000522900 ME3Q16798 604 aa21.15■□□□□ 0.98
SPIDR-220ENST00000522900 Q4G0T1 1027 aa21.15■□□□□ 0.98
SPIDR-220ENST00000522900 ZNF484Q5JVG2 852 aa21.15■□□□□ 0.98
SPIDR-220ENST00000522900 GALNT17Q6IS24 598 aa21.15■□□□□ 0.98
SPIDR-220ENST00000522900 KIAA0319LQ8IZA0 1049 aa21.15■□□□□ 0.98
SPIDR-220ENST00000522900 SP7Q8TDD2 431 aaPredicted RBP21.15■□□□□ 0.98
SPIDR-220ENST00000522900 GDPD5Q8WTR4 605 aa21.15■□□□□ 0.98
SPIDR-220ENST00000522900 RIT2Q99578 217 aa21.15■□□□□ 0.98
SPIDR-220ENST00000522900 C17orf80Q9BSJ5 609 aa21.15■□□□□ 0.98
SPIDR-220ENST00000522900 CELF4Q9BZC1 486 aaKnown RBP21.15■□□□□ 0.98
SPIDR-220ENST00000522900 C22orf23Q9BZE7 217 aa21.15■□□□□ 0.98
SPIDR-220ENST00000522900 MYO9BQ13459 2157 aa21.14■□□□□ 0.98
SPIDR-220ENST00000522900 CHMP2AO43633 222 aa21.14■□□□□ 0.97
SPIDR-220ENST00000522900 FDPSP14324 419 aaKnown RBP21.14■□□□□ 0.97
SPIDR-220ENST00000522900 NEK4P51957 841 aa21.14■□□□□ 0.97
SPIDR-220ENST00000522900 INF2Q27J81 1249 aa21.14■□□□□ 0.97
SPIDR-220ENST00000522900 RTN4RL1Q86UN2 441 aaPredicted RBP21.14■□□□□ 0.97
SPIDR-220ENST00000522900 FAM177A1Q8N128 213 aaPredicted RBP21.14■□□□□ 0.97
SPIDR-220ENST00000522900 NME8Q8N427 588 aa21.14■□□□□ 0.97
SPIDR-220ENST00000522900 OXER1Q8TDS5 423 aa21.14■□□□□ 0.97
SPIDR-220ENST00000522900 LINC01599Q8WXQ3 324 aa21.14■□□□□ 0.97
SPIDR-220ENST00000522900 YME1L1Q96TA2 773 aa21.14■□□□□ 0.97
SPIDR-220ENST00000522900 UNC45AQ9H3U1 944 aa21.14■□□□□ 0.97
SPIDR-220ENST00000522900 DISC1Q9NRI5 854 aa21.14■□□□□ 0.97
SPIDR-220ENST00000522900 ORC3Q9UBD5 711 aaPredicted RBP21.14■□□□□ 0.97
SPIDR-220ENST00000522900 TCEAL9Q9UHQ7 104 aa21.14■□□□□ 0.97
SPIDR-220ENST00000522900 KAT6AQ92794 2004 aa21.14■□□□□ 0.97
SPIDR-220ENST00000522900 STK36Q9NRP7 1315 aa21.13■□□□□ 0.97
SPIDR-220ENST00000522900 WDR64B1ANS9 1081 aa21.13■□□□□ 0.97
SPIDR-220ENST00000522900 GTPBP6O43824 516 aaPredicted RBP21.13■□□□□ 0.97
SPIDR-220ENST00000522900 ZNF862O60290 1169 aa21.13■□□□□ 0.97
SPIDR-220ENST00000522900 GAS7O60861 476 aa21.13■□□□□ 0.97
SPIDR-220ENST00000522900 PSMD10O75832 226 aa21.13■□□□□ 0.97
SPIDR-220ENST00000522900 C22orf31O95567 290 aa21.13■□□□□ 0.97
SPIDR-220ENST00000522900 RPLP2P05387 115 aaKnown RBP21.13■□□□□ 0.97
SPIDR-220ENST00000522900 NONOQ15233 471 aaKnown RBP eCLIP21.13■□□□□ 0.97
SPIDR-220ENST00000522900 UGCGQ16739 394 aa21.13■□□□□ 0.97
SPIDR-220ENST00000522900 LRCH2Q5VUJ6 765 aa21.13■□□□□ 0.97
SPIDR-220ENST00000522900 BBXQ8WY36 941 aaPredicted RBP21.13■□□□□ 0.97
SPIDR-220ENST00000522900 MBOAT7Q96N66 472 aa21.13■□□□□ 0.97
SPIDR-220ENST00000522900 TEKT3Q9BXF9 490 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms