RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 ERBB4Q15303 1308 aa12.25□□□□□ -0.45
LAMA4-219ENST00000522006 EXOC8Q8IYI6 725 aa12.25□□□□□ -0.45
LAMA4-219ENST00000522006 HIPK4Q8NE63 616 aa12.25□□□□□ -0.45
LAMA4-219ENST00000522006 GIPC2Q8TF65 315 aa12.25□□□□□ -0.45
LAMA4-219ENST00000522006 SAYSD1Q9NPB0 183 aa12.25□□□□□ -0.45
LAMA4-219ENST00000522006 USP14P54578 494 aa12.24□□□□□ -0.45
LAMA4-219ENST00000522006 CUL4AQ13619 759 aa12.24□□□□□ -0.45
LAMA4-219ENST00000522006 E2F4Q16254 413 aa12.24□□□□□ -0.45
LAMA4-219ENST00000522006 HNRNPCL2B2RXH8 293 aa12.24□□□□□ -0.45
LAMA4-219ENST00000522006 HNRNPCL1O60812 293 aaKnown RBP12.24□□□□□ -0.45
LAMA4-219ENST00000522006 PALMO75781 387 aa12.24□□□□□ -0.45
LAMA4-219ENST00000522006 PITPNM3Q9BZ71 974 aa12.24□□□□□ -0.45
LAMA4-219ENST00000522006 DIS3Q9Y2L1 958 aaKnown RBP12.24□□□□□ -0.45
LAMA4-219ENST00000522006 IPO5O00410 1097 aaKnown RBP12.24□□□□□ -0.45
LAMA4-219ENST00000522006 PNMA6AP0CW24 399 aaPredicted RBP12.24□□□□□ -0.45
LAMA4-219ENST00000522006 PSMA2P25787 234 aa12.24□□□□□ -0.45
LAMA4-219ENST00000522006 ARHGDIAP52565 204 aa12.24□□□□□ -0.45
LAMA4-219ENST00000522006 TTC17Q96AE7 1141 aa12.24□□□□□ -0.45
LAMA4-219ENST00000522006 LEMD3Q9Y2U8 911 aa12.24□□□□□ -0.45
LAMA4-219ENST00000522006 CRKLP46109 303 aaKnown RBP12.24□□□□□ -0.45
LAMA4-219ENST00000522006 LRRC63Q05C16 580 aa12.24□□□□□ -0.45
LAMA4-219ENST00000522006 CTTNQ14247 550 aaKnown RBP12.24□□□□□ -0.45
LAMA4-219ENST00000522006 EMBQ6PCB8 327 aa12.24□□□□□ -0.45
LAMA4-219ENST00000522006 USP17L2Q6R6M4 530 aa12.24□□□□□ -0.45
LAMA4-219ENST00000522006 ZC3H18Q86VM9 953 aaKnown RBP12.24□□□□□ -0.45
LAMA4-219ENST00000522006 PLEKHF1Q96S99 279 aa12.24□□□□□ -0.45
LAMA4-219ENST00000522006 NOP53Q9NZM5 478 aaKnown RBP12.24□□□□□ -0.45
LAMA4-219ENST00000522006 MCF2P10911 925 aa12.24□□□□□ -0.45
LAMA4-219ENST00000522006 BMP3P12645 472 aa12.24□□□□□ -0.45
LAMA4-219ENST00000522006 ZNF18P17022 549 aa12.24□□□□□ -0.45
LAMA4-219ENST00000522006 OSBPP22059 807 aa12.24□□□□□ -0.45
LAMA4-219ENST00000522006 PMLP29590 882 aa12.24□□□□□ -0.45
LAMA4-219ENST00000522006 TMEM259Q4ZIN3 620 aa12.24□□□□□ -0.45
LAMA4-219ENST00000522006 HABP4Q5JVS0 413 aaKnown RBP12.24□□□□□ -0.45
LAMA4-219ENST00000522006 SULF1Q8IWU6 871 aa12.24□□□□□ -0.45
LAMA4-219ENST00000522006 H3BRJ5 948 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 PSAPP07602 524 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 KRT10P13645 584 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 TAC1P20366 129 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 SPARCL1Q14515 664 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 TRIM59Q8IWR1 403 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 ALKBH8Q96BT7 664 aaKnown RBP12.23□□□□□ -0.45
LAMA4-219ENST00000522006 LRFN2Q9ULH4 789 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 ANGPTL8Q6UXH0 198 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 PDIK1LQ8N165 341 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 TMEM60Q9H2L4 133 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 SRGAP2O75044 1071 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 TJP3O95049 919 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 ATP1A3P13637 1013 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 TMPRSS15P98073 1019 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 DHX38Q92620 1227 aaKnown RBP12.23□□□□□ -0.45
LAMA4-219ENST00000522006 TSC22D3Q99576 134 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 COPEO14579 308 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 EPHB1P54762 984 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 HNRNPH2P55795 449 aaKnown RBP12.23□□□□□ -0.45
LAMA4-219ENST00000522006 RESP18Q5W5W9 173 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 PPP4R3CPQ6ZMV5 832 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 RHOT2Q8IXI1 618 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 IRAK4Q9NWZ3 460 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 PPP1R12AO14974 1030 aaPredicted RBP12.23□□□□□ -0.45
LAMA4-219ENST00000522006 ANXA13P27216 316 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 HOXA7P31268 230 aaPredicted RBP12.23□□□□□ -0.45
LAMA4-219ENST00000522006 ERICH1Q86X53 443 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 NCLNQ969V3 563 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 DYNLL2Q96FJ2 89 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 MSTO1Q9BUK6 570 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 AP5M1Q9H0R1 490 aa12.23□□□□□ -0.45
LAMA4-219ENST00000522006 RPF1Q9H9Y2 349 aaKnown RBP12.23□□□□□ -0.45
LAMA4-219ENST00000522006 ADGBQ8N7X0 1667 aa12.22□□□□□ -0.45
LAMA4-219ENST00000522006 GYG2O15488 501 aa12.22□□□□□ -0.45
LAMA4-219ENST00000522006 PDCLQ13371 301 aa12.22□□□□□ -0.45
LAMA4-219ENST00000522006 GLE1Q53GS7 698 aaKnown RBP12.22□□□□□ -0.45
LAMA4-219ENST00000522006 TAF1BQ53T94 588 aaPredicted RBP12.22□□□□□ -0.45
LAMA4-219ENST00000522006 ZSWIM5Q9P217 1185 aa12.22□□□□□ -0.45
LAMA4-219ENST00000522006 PPARGC1AQ9UBK2 798 aaKnown RBP12.22□□□□□ -0.45
LAMA4-219ENST00000522006 ADD3Q9UEY8 706 aaKnown RBP12.22□□□□□ -0.45
LAMA4-219ENST00000522006 KITP10721 976 aa12.22□□□□□ -0.45
LAMA4-219ENST00000522006 ZSCAN20P17040 1043 aaPredicted RBP12.22□□□□□ -0.45
LAMA4-219ENST00000522006 CDC37Q16543 378 aaPredicted RBP12.22□□□□□ -0.45
LAMA4-219ENST00000522006 ALKBH5Q6P6C2 394 aaKnown RBP12.22□□□□□ -0.45
LAMA4-219ENST00000522006 TRIM55Q9BYV6 548 aa12.22□□□□□ -0.45
LAMA4-219ENST00000522006 KANSL2Q9H9L4 492 aa12.22□□□□□ -0.45
LAMA4-219ENST00000522006 ZFP69BQ9UJL9 534 aa12.22□□□□□ -0.45
LAMA4-219ENST00000522006 PODXLO00592 558 aa12.22□□□□□ -0.45
LAMA4-219ENST00000522006 USP17L8P0C7I0 530 aa12.22□□□□□ -0.45
LAMA4-219ENST00000522006 NPR1P16066 1061 aa12.22□□□□□ -0.45
LAMA4-219ENST00000522006 MDM2Q00987 491 aaPredicted RBP12.22□□□□□ -0.45
LAMA4-219ENST00000522006 ARL13BQ3SXY8 428 aa12.22□□□□□ -0.45
LAMA4-219ENST00000522006 BEND6Q5SZJ8 279 aaPredicted RBP12.22□□□□□ -0.45
LAMA4-219ENST00000522006 OSBP2Q969R2 916 aa12.22□□□□□ -0.45
LAMA4-219ENST00000522006 KLC2Q9H0B6 622 aa12.22□□□□□ -0.45
LAMA4-219ENST00000522006 SEC31BQ9NQW1 1179 aa12.22□□□□□ -0.45
LAMA4-219ENST00000522006 HACD3Q9P035 362 aa12.22□□□□□ -0.45
LAMA4-219ENST00000522006 UBN2Q6ZU65 1347 aa12.22□□□□□ -0.45
LAMA4-219ENST00000522006 SNAP25P60880 206 aa12.22□□□□□ -0.45
LAMA4-219ENST00000522006 NSUN2Q08J23 767 aaKnown RBP eCLIP12.22□□□□□ -0.45
LAMA4-219ENST00000522006 CEP70Q8NHQ1 597 aa12.22□□□□□ -0.45
LAMA4-219ENST00000522006 SMYD3Q9H7B4 428 aa12.22□□□□□ -0.45
LAMA4-219ENST00000522006 SLC13A4Q9UKG4 626 aa12.22□□□□□ -0.45
LAMA4-219ENST00000522006 PLEKHG3A1L390 1219 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms