RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 MED7O43513 233 aa17.52■□□□□ 0.39
USP42-207ENST00000521713 MFSD14CQ5VZR4 134 aa17.52■□□□□ 0.39
USP42-207ENST00000521713 ADGRF4Q8IZF3 695 aa17.52■□□□□ 0.39
USP42-207ENST00000521713 FAM49AQ9H0Q0 323 aaPredicted RBP17.52■□□□□ 0.39
USP42-207ENST00000521713 ZWINTO95229 277 aa17.51■□□□□ 0.39
USP42-207ENST00000521713 THAP9Q9H5L6 903 aa17.51■□□□□ 0.39
USP42-207ENST00000521713 TXNDC9O14530 226 aa17.51■□□□□ 0.39
USP42-207ENST00000521713 IFNB1P01574 187 aa17.51■□□□□ 0.39
USP42-207ENST00000521713 DPEP1P16444 411 aa17.51■□□□□ 0.39
USP42-207ENST00000521713 COG2Q14746 738 aa17.51■□□□□ 0.39
USP42-207ENST00000521713 CPVLQ9H3G5 476 aa17.51■□□□□ 0.39
USP42-207ENST00000521713 ATP8B3O60423 1300 aa17.51■□□□□ 0.39
USP42-207ENST00000521713 KCNK3O14649 394 aa17.51■□□□□ 0.39
USP42-207ENST00000521713 DPCR1Q3MIW9 517 aa17.51■□□□□ 0.39
USP42-207ENST00000521713 RPAP3Q9H6T3 665 aaPredicted RBP17.51■□□□□ 0.39
USP42-207ENST00000521713 FLT1P17948 1338 aa17.51■□□□□ 0.39
USP42-207ENST00000521713 ATP1A2P50993 1020 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 CCHCR1Q8TD31 782 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 MSTO1Q9BUK6 570 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 ZNF70Q9UC06 446 aaPredicted RBP17.5■□□□□ 0.39
USP42-207ENST00000521713 WDR46O15213 610 aaKnown RBP17.5■□□□□ 0.39
USP42-207ENST00000521713 CLTAP09496 248 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 EZH2Q15910 746 aaKnown RBP17.5■□□□□ 0.39
USP42-207ENST00000521713 RASIP1Q5U651 963 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 KIAA1586Q9HCI6 787 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 RNF14Q9UBS8 474 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.5■□□□□ 0.39
USP42-207ENST00000521713 SMIM24O75264 130 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 USP11P51784 963 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 HMGCS2P54868 508 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 PPP2R5DQ14738 602 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 GEN1Q17RS7 908 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 KCNV1Q6PIU1 500 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 MXD3Q9BW11 206 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 NYAP2Q9P242 653 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 TYW5A2RUC4 315 aaKnown RBP17.5■□□□□ 0.39
USP42-207ENST00000521713 PEX19P40855 299 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 CLCN6P51797 869 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 HNRNPH2P55795 449 aaKnown RBP17.5■□□□□ 0.39
USP42-207ENST00000521713 PEX3P56589 373 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 NFX1Q12986 1120 aaKnown RBP17.5■□□□□ 0.39
USP42-207ENST00000521713 UNC13DQ70J99 1090 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 ZBTB33Q86T24 672 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 SMYD4Q8IYR2 804 aaPredicted RBP17.5■□□□□ 0.39
USP42-207ENST00000521713 GRAMD1CQ8IYS0 662 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 AGBL3Q8NEM8 1001 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 RUNDC3BQ96NL0 473 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 DESI2Q9BSY9 194 aa17.5■□□□□ 0.39
USP42-207ENST00000521713 KDM6AO15550 1401 aaPredicted RBP17.5■□□□□ 0.39
USP42-207ENST00000521713 A6NJR5 290 aa17.49■□□□□ 0.39
USP42-207ENST00000521713 THAP12O43422 761 aa17.49■□□□□ 0.39
USP42-207ENST00000521713 CRCPO75575 148 aa17.49■□□□□ 0.39
USP42-207ENST00000521713 P4HBP07237 508 aaKnown RBP17.49■□□□□ 0.39
USP42-207ENST00000521713 PHKA2P46019 1235 aa17.49■□□□□ 0.39
USP42-207ENST00000521713 MAPK6Q16659 721 aa17.49■□□□□ 0.39
USP42-207ENST00000521713 ELMSAN1Q6PJG2 1045 aa17.49■□□□□ 0.39
USP42-207ENST00000521713 FAM149B1Q96BN6 582 aa17.49■□□□□ 0.39
USP42-207ENST00000521713 TOPORSQ9NS56 1045 aaPredicted RBP17.49■□□□□ 0.39
USP42-207ENST00000521713 MTMR4Q9NYA4 1195 aa17.49■□□□□ 0.39
USP42-207ENST00000521713 HDLBPQ00341 1268 aaKnown RBP17.49■□□□□ 0.39
USP42-207ENST00000521713 PDIA6Q15084 440 aa17.49■□□□□ 0.39
USP42-207ENST00000521713 SPZ1Q9BXG8 430 aa17.49■□□□□ 0.39
USP42-207ENST00000521713 MST1RQ04912 1400 aa17.49■□□□□ 0.39
USP42-207ENST00000521713 GUCY2FP51841 1108 aa17.49■□□□□ 0.39
USP42-207ENST00000521713 TRIM68Q6AZZ1 485 aa17.49■□□□□ 0.39
USP42-207ENST00000521713 GDAP1L1Q96MZ0 367 aa17.49■□□□□ 0.39
USP42-207ENST00000521713 TYW1Q9NV66 732 aaKnown RBP17.49■□□□□ 0.39
USP42-207ENST00000521713 MYO1CO00159 1063 aa17.49■□□□□ 0.39
USP42-207ENST00000521713 DDIT3P35638 169 aa17.49■□□□□ 0.39
USP42-207ENST00000521713 SLC12A2P55011 1212 aa17.49■□□□□ 0.39
USP42-207ENST00000521713 TNFAIP2Q03169 654 aa17.49■□□□□ 0.39
USP42-207ENST00000521713 BIRC2Q13490 618 aa17.49■□□□□ 0.39
USP42-207ENST00000521713 ARMCX2Q7L311 632 aa17.49■□□□□ 0.39
USP42-207ENST00000521713 LDHDQ86WU2 507 aa17.49■□□□□ 0.39
USP42-207ENST00000521713 PSPC1Q8WXF1 523 aaKnown RBP17.49■□□□□ 0.39
USP42-207ENST00000521713 NXF1Q9UBU9 619 aaKnown RBP17.49■□□□□ 0.39
USP42-207ENST00000521713 QARSP47897 775 aaKnown RBP17.48■□□□□ 0.39
USP42-207ENST00000521713 CDC42EP5Q6NZY7 148 aa17.48■□□□□ 0.39
USP42-207ENST00000521713 INTS5Q6P9B9 1019 aaKnown RBP17.48■□□□□ 0.39
USP42-207ENST00000521713 CNOT10Q9H9A5 744 aaKnown RBP17.48■□□□□ 0.39
USP42-207ENST00000521713 KRIT1O00522 736 aa17.48■□□□□ 0.39
USP42-207ENST00000521713 BBS5Q8N3I7 341 aa17.48■□□□□ 0.39
USP42-207ENST00000521713 GTF3C2Q8WUA4 911 aaPredicted RBP17.48■□□□□ 0.39
USP42-207ENST00000521713 KIAA1210Q9ULL0 1709 aa17.48■□□□□ 0.39
USP42-207ENST00000521713 PNMA6AP0CW24 399 aaPredicted RBP17.48■□□□□ 0.39
USP42-207ENST00000521713 CASP14P31944 242 aa17.48■□□□□ 0.39
USP42-207ENST00000521713 ALS2CLQ60I27 953 aa17.48■□□□□ 0.39
USP42-207ENST00000521713 PADI6Q6TGC4 694 aa17.48■□□□□ 0.39
USP42-207ENST00000521713 TEX13BQ9BXU2 312 aa17.48■□□□□ 0.39
USP42-207ENST00000521713 TKFCQ3LXA3 575 aa17.48■□□□□ 0.39
USP42-207ENST00000521713 RESP18Q5W5W9 173 aa17.48■□□□□ 0.39
USP42-207ENST00000521713 RINT1Q6NUQ1 792 aa17.48■□□□□ 0.39
USP42-207ENST00000521713 DDX27Q96GQ7 796 aaKnown RBP17.48■□□□□ 0.39
USP42-207ENST00000521713 LRRC4Q9HBW1 653 aa17.48■□□□□ 0.39
USP42-207ENST00000521713 ZNF302Q9NR11 478 aa17.48■□□□□ 0.39
USP42-207ENST00000521713 ZBTB12Q9Y330 459 aaPredicted RBP17.48■□□□□ 0.39
USP42-207ENST00000521713 ZNF280CQ8ND82 737 aa17.47■□□□□ 0.39
USP42-207ENST00000521713 GCNT4Q9P109 453 aa17.47■□□□□ 0.39
USP42-207ENST00000521713 PVALEFA0A1B0GWK0 134 aa17.47■□□□□ 0.39
USP42-207ENST00000521713 BBOF1Q8ND07 529 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms