RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 ATP8B4Q8TF62 1192 aa13.91□□□□□ -0.18
CLK4-208ENST00000520957 DHX38Q92620 1227 aaKnown RBP13.91□□□□□ -0.18
CLK4-208ENST00000520957 TBX21Q9UL17 535 aa13.91□□□□□ -0.18
CLK4-208ENST00000520957 SCN10AQ9Y5Y9 1956 aa13.91□□□□□ -0.18
CLK4-208ENST00000520957 IGSF9BQ9UPX0 1349 aa13.91□□□□□ -0.18
CLK4-208ENST00000520957 LAMA2P24043 3122 aaKnown RBP13.91□□□□□ -0.18
CLK4-208ENST00000520957 SPATA31C1P0DKV0 1188 aa13.91□□□□□ -0.18
CLK4-208ENST00000520957 MARCKSP29966 332 aaPredicted RBP13.91□□□□□ -0.18
CLK4-208ENST00000520957 PRKCEQ02156 737 aa13.91□□□□□ -0.18
CLK4-208ENST00000520957 PTPN11Q06124 597 aaPredicted RBP13.91□□□□□ -0.18
CLK4-208ENST00000520957 ECM1Q16610 540 aa13.91□□□□□ -0.18
CLK4-208ENST00000520957 TPH2Q8IWU9 490 aa13.91□□□□□ -0.18
CLK4-208ENST00000520957 ZNF579Q8NAF0 562 aaKnown RBP13.91□□□□□ -0.18
CLK4-208ENST00000520957 RDM1Q8NG50 284 aa13.91□□□□□ -0.18
CLK4-208ENST00000520957 ATP6V0A1Q93050 837 aa13.91□□□□□ -0.18
CLK4-208ENST00000520957 PPP1R12CQ9BZL4 782 aa13.91□□□□□ -0.18
CLK4-208ENST00000520957 MROH7Q68CQ1 1323 aa13.9□□□□□ -0.18
CLK4-208ENST00000520957 VWA3AA6NCI4 1184 aa13.9□□□□□ -0.18
CLK4-208ENST00000520957 DDX11L8A8MPP1 907 aa13.9□□□□□ -0.18
CLK4-208ENST00000520957 MED24O75448 989 aa13.9□□□□□ -0.18
CLK4-208ENST00000520957 P4HBP07237 508 aaKnown RBP13.9□□□□□ -0.18
CLK4-208ENST00000520957 CYP2C18P33260 490 aa13.9□□□□□ -0.18
CLK4-208ENST00000520957 ANP32AP39687 249 aaKnown RBP13.9□□□□□ -0.18
CLK4-208ENST00000520957 QARSP47897 775 aaKnown RBP13.9□□□□□ -0.18
CLK4-208ENST00000520957 FXR2P51116 673 aaKnown RBP eCLIP13.9□□□□□ -0.18
CLK4-208ENST00000520957 DTHD1Q6ZMT9 781 aa13.9□□□□□ -0.18
CLK4-208ENST00000520957 RUFY4Q6ZNE9 571 aa13.9□□□□□ -0.18
CLK4-208ENST00000520957 ANO5Q75V66 913 aa13.9□□□□□ -0.18
CLK4-208ENST00000520957 CATSPER3Q86XQ3 398 aa13.9□□□□□ -0.18
CLK4-208ENST00000520957 IGSF22Q8N9C0 903 aa13.9□□□□□ -0.18
CLK4-208ENST00000520957 LXNQ9BS40 222 aa13.9□□□□□ -0.18
CLK4-208ENST00000520957 NOD1Q9Y239 953 aa13.9□□□□□ -0.18
CLK4-208ENST00000520957 NR2E3Q9Y5X4 410 aa13.9□□□□□ -0.18
CLK4-208ENST00000520957 NRCAMQ92823 1304 aa13.9□□□□□ -0.19
CLK4-208ENST00000520957 KIAA0355O15063 1070 aa13.89□□□□□ -0.19
CLK4-208ENST00000520957 OATP04181 439 aa13.89□□□□□ -0.19
CLK4-208ENST00000520957 PRPHP41219 470 aa13.89□□□□□ -0.19
CLK4-208ENST00000520957 SLC26A2P50443 739 aa13.89□□□□□ -0.19
CLK4-208ENST00000520957 CCL23P55773 120 aa13.89□□□□□ -0.19
CLK4-208ENST00000520957 NPEPPSP55786 919 aa13.89□□□□□ -0.19
CLK4-208ENST00000520957 PSMC5P62195 406 aa13.89□□□□□ -0.19
CLK4-208ENST00000520957 DNM1Q05193 864 aaKnown RBP13.89□□□□□ -0.19
CLK4-208ENST00000520957 PLA2G4FQ68DD2 849 aa13.89□□□□□ -0.19
CLK4-208ENST00000520957 NOC4LQ9BVI4 516 aaKnown RBP13.89□□□□□ -0.19
CLK4-208ENST00000520957 LRWD1Q9UFC0 647 aa13.89□□□□□ -0.19
CLK4-208ENST00000520957 LAD1O00515 517 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 TLR3O15455 904 aaKnown RBP13.88□□□□□ -0.19
CLK4-208ENST00000520957 HBP1O60381 514 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 KLRC1P26715 233 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 MDM2Q00987 491 aaPredicted RBP13.88□□□□□ -0.19
CLK4-208ENST00000520957 PDIA5Q14554 519 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 TRIM71Q2Q1W2 868 aaKnown RBP13.88□□□□□ -0.19
CLK4-208ENST00000520957 SPECC1Q5M775 1068 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 SERINC5Q86VE9 423 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 PIGOQ8TEQ8 1089 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 BBXQ8WY36 941 aaPredicted RBP13.88□□□□□ -0.19
CLK4-208ENST00000520957 BADQ92934 168 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 CLIC6Q96NY7 704 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 MMTAG2Q9BU76 263 aaKnown RBP13.88□□□□□ -0.19
CLK4-208ENST00000520957 SEZ6LQ9BYH1 1024 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 OSBPL7Q9BZF2 842 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 HIPK3Q9H422 1215 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 LAMA3Q16787 3333 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 ALPK3Q96L96 1907 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 MBLAC1A4D2B0 266 aaPredicted RBP13.88□□□□□ -0.19
CLK4-208ENST00000520957 PDIA4P13667 645 aaKnown RBP13.88□□□□□ -0.19
CLK4-208ENST00000520957 RAG1P15918 1043 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 SLC39A14Q15043 492 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 TARBP2Q15633 366 aaKnown RBP13.88□□□□□ -0.19
CLK4-208ENST00000520957 TMEM266Q2M3C6 531 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 XKR3Q5GH77 459 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 MTHFD1LQ6UB35 978 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 USP49Q70CQ1 688 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 SCLYQ96I15 445 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 CEP89Q96ST8 783 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 WNT8AQ9H1J5 351 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 ZSWIM4Q9H7M6 989 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 NRBP2Q9NSY0 501 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 SEPT9Q9UHD8 586 aaPredicted RBP13.88□□□□□ -0.19
CLK4-208ENST00000520957 TUBE1Q9UJT0 475 aa13.88□□□□□ -0.19
CLK4-208ENST00000520957 RRN3P2A6NIE6 340 aa13.87□□□□□ -0.19
CLK4-208ENST00000520957 TIMP1P01033 207 aa13.87□□□□□ -0.19
CLK4-208ENST00000520957 GNAT1P11488 350 aa13.87□□□□□ -0.19
CLK4-208ENST00000520957 EPHB4P54760 987 aa13.87□□□□□ -0.19
CLK4-208ENST00000520957 PTK7Q13308 1070 aa13.87□□□□□ -0.19
CLK4-208ENST00000520957 MTERF2Q49AM1 385 aa13.87□□□□□ -0.19
CLK4-208ENST00000520957 ARL6IP4Q66PJ3 421 aaKnown RBP13.87□□□□□ -0.19
CLK4-208ENST00000520957 POTEGQ6S5H5 508 aa13.87□□□□□ -0.19
CLK4-208ENST00000520957 C4orf19Q8IY42 314 aa13.87□□□□□ -0.19
CLK4-208ENST00000520957 LINC00301Q8NCQ3 95 aa13.87□□□□□ -0.19
CLK4-208ENST00000520957 DNAJB3Q8WWF6 145 aa13.87□□□□□ -0.19
CLK4-208ENST00000520957 PLIN2Q99541 437 aa13.87□□□□□ -0.19
CLK4-208ENST00000520957 NIFKQ9BYG3 293 aaKnown RBP13.87□□□□□ -0.19
CLK4-208ENST00000520957 FAM49AQ9H0Q0 323 aaPredicted RBP13.87□□□□□ -0.19
CLK4-208ENST00000520957 PRKAG2Q9UGJ0 569 aa13.87□□□□□ -0.19
CLK4-208ENST00000520957 FBXO2Q9UK22 296 aaPredicted RBP13.87□□□□□ -0.19
CLK4-208ENST00000520957 C22orf31O95567 290 aa13.86□□□□□ -0.19
CLK4-208ENST00000520957 CKBP12277 381 aa13.86□□□□□ -0.19
CLK4-208ENST00000520957 RPA1P27694 616 aa13.86□□□□□ -0.19
CLK4-208ENST00000520957 YWHABP31946 246 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms