RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 K7ELQ4 463 aaPredicted RBP18.34■□□□□ 0.53
TNPO1-212ENST00000520850 NEMFO60524 1076 aa18.34■□□□□ 0.53
TNPO1-212ENST00000520850 PDCP20941 246 aa18.34■□□□□ 0.53
TNPO1-212ENST00000520850 SPIRE1Q08AE8 756 aa18.34■□□□□ 0.53
TNPO1-212ENST00000520850 GNL2Q13823 731 aaKnown RBP18.34■□□□□ 0.53
TNPO1-212ENST00000520850 LARP1BQ659C4 914 aaKnown RBP18.34■□□□□ 0.53
TNPO1-212ENST00000520850 RSPH3Q86UC2 560 aa18.34■□□□□ 0.53
TNPO1-212ENST00000520850 ZNF710Q8N1W2 664 aa18.34■□□□□ 0.53
TNPO1-212ENST00000520850 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.34■□□□□ 0.531e-6■■□□□ 13.4
TNPO1-212ENST00000520850 NOL7Q9UMY1 257 aaKnown RBP18.34■□□□□ 0.53
TNPO1-212ENST00000520850 TRPC6Q9Y210 931 aa18.34■□□□□ 0.53
TNPO1-212ENST00000520850 SQORQ9Y6N5 450 aa18.34■□□□□ 0.53
TNPO1-212ENST00000520850 RSPH10B2B2RC85 870 aa18.33■□□□□ 0.52
TNPO1-212ENST00000520850 MARCH6O60337 910 aa18.33■□□□□ 0.52
TNPO1-212ENST00000520850 P4HBP07237 508 aaKnown RBP18.33■□□□□ 0.52
TNPO1-212ENST00000520850 RSPH10BP0C881 870 aa18.33■□□□□ 0.52
TNPO1-212ENST00000520850 FOSBP53539 338 aa18.33■□□□□ 0.52
TNPO1-212ENST00000520850 GPNMBQ14956 572 aa18.33■□□□□ 0.52
TNPO1-212ENST00000520850 EPHA7Q15375 998 aa18.33■□□□□ 0.52
TNPO1-212ENST00000520850 CALCRLQ16602 461 aa18.33■□□□□ 0.52
TNPO1-212ENST00000520850 C9orf50Q5SZB4 431 aa18.33■□□□□ 0.52
TNPO1-212ENST00000520850 ZNF618Q5T7W0 954 aa18.33■□□□□ 0.52
TNPO1-212ENST00000520850 ZNF365Q70YC5 407 aa18.33■□□□□ 0.52
TNPO1-212ENST00000520850 WNT8BQ93098 351 aa18.33■□□□□ 0.52
TNPO1-212ENST00000520850 GJA10Q969M2 543 aa18.33■□□□□ 0.52
TNPO1-212ENST00000520850 SCLYQ96I15 445 aa18.33■□□□□ 0.52
TNPO1-212ENST00000520850 UIMC1Q96RL1 719 aa18.33■□□□□ 0.52
TNPO1-212ENST00000520850 NIFKQ9BYG3 293 aaKnown RBP18.33■□□□□ 0.52
TNPO1-212ENST00000520850 MTIF3Q9H2K0 278 aaKnown RBP18.33■□□□□ 0.52
TNPO1-212ENST00000520850 WDR81Q562E7 1941 aa18.33■□□□□ 0.52
TNPO1-212ENST00000520850 LAMA3Q16787 3333 aa18.32■□□□□ 0.52
TNPO1-212ENST00000520850 ZBTB42B2RXF5 422 aa18.32■□□□□ 0.52
TNPO1-212ENST00000520850 KIF28PB7ZC32 967 aa18.32■□□□□ 0.52
TNPO1-212ENST00000520850 H3BQV1 296 aa18.32■□□□□ 0.52
TNPO1-212ENST00000520850 MAGEB2O15479 319 aa18.32■□□□□ 0.52
TNPO1-212ENST00000520850 ZNF862O60290 1169 aa18.32■□□□□ 0.52
TNPO1-212ENST00000520850 PDIA4P13667 645 aaKnown RBP18.32■□□□□ 0.52
TNPO1-212ENST00000520850 THPOP40225 353 aa18.32■□□□□ 0.52
TNPO1-212ENST00000520850 FXR1P51114 621 aaKnown RBP eCLIP18.32■□□□□ 0.52
TNPO1-212ENST00000520850 PSMC5P62195 406 aa18.32■□□□□ 0.52
TNPO1-212ENST00000520850 RILPL1Q5EBL4 403 aa18.32■□□□□ 0.52
TNPO1-212ENST00000520850 XKR3Q5GH77 459 aa18.32■□□□□ 0.52
TNPO1-212ENST00000520850 MTHFD1LQ6UB35 978 aa18.32■□□□□ 0.52
TNPO1-212ENST00000520850 PPME1Q9Y570 386 aa18.32■□□□□ 0.52
TNPO1-212ENST00000520850 TANC1Q9C0D5 1861 aa18.31■□□□□ 0.52
TNPO1-212ENST00000520850 TRIOBPQ9H2D6 2365 aa18.31■□□□□ 0.52
TNPO1-212ENST00000520850 LAD1O00515 517 aa18.31■□□□□ 0.52
TNPO1-212ENST00000520850 WNT7AO00755 349 aa18.31■□□□□ 0.52
TNPO1-212ENST00000520850 BAIAP3O94812 1187 aa18.31■□□□□ 0.52
TNPO1-212ENST00000520850 OATP04181 439 aa18.31■□□□□ 0.52
TNPO1-212ENST00000520850 ACTN1P12814 892 aa18.31■□□□□ 0.52
TNPO1-212ENST00000520850 QARSP47897 775 aaKnown RBP18.31■□□□□ 0.52
TNPO1-212ENST00000520850 TOB1P50616 345 aaPredicted RBP18.31■□□□□ 0.52
TNPO1-212ENST00000520850 C4orf19Q8IY42 314 aa18.31■□□□□ 0.52
TNPO1-212ENST00000520850 CKAP2LQ8IYA6 745 aa18.31■□□□□ 0.52
TNPO1-212ENST00000520850 RNPC3Q96LT9 517 aaKnown RBP18.31■□□□□ 0.52
TNPO1-212ENST00000520850 TTC12Q9H892 705 aaPredicted RBP18.31■□□□□ 0.52
TNPO1-212ENST00000520850 PCDH10Q9P2E7 1040 aa18.31■□□□□ 0.52
TNPO1-212ENST00000520850 KDM3AQ9Y4C1 1321 aa18.3■□□□□ 0.52
TNPO1-212ENST00000520850 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.3■□□□□ 0.52
TNPO1-212ENST00000520850 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.3■□□□□ 0.52
TNPO1-212ENST00000520850 EML1O00423 815 aa18.3■□□□□ 0.52
TNPO1-212ENST00000520850 CHMP2AO43633 222 aa18.3■□□□□ 0.52
TNPO1-212ENST00000520850 NBNO60934 754 aa18.3■□□□□ 0.52
TNPO1-212ENST00000520850 EFCAB14O75071 495 aa18.3■□□□□ 0.52
TNPO1-212ENST00000520850 STBD1O95210 358 aa18.3■□□□□ 0.52
TNPO1-212ENST00000520850 ACRP10323 421 aa18.3■□□□□ 0.52
TNPO1-212ENST00000520850 KLRC1P26715 233 aa18.3■□□□□ 0.52
TNPO1-212ENST00000520850 SMAD3P84022 425 aaKnown RBP18.3■□□□□ 0.52
TNPO1-212ENST00000520850 TARBP2Q15633 366 aaKnown RBP18.3■□□□□ 0.52
TNPO1-212ENST00000520850 TTC38Q5R3I4 469 aa18.3■□□□□ 0.52
TNPO1-212ENST00000520850 IER5Q5VY09 327 aa18.3■□□□□ 0.52
TNPO1-212ENST00000520850 C4orf32Q8N8J7 132 aa18.3■□□□□ 0.52
TNPO1-212ENST00000520850 NEK9Q8TD19 979 aa18.3■□□□□ 0.52
TNPO1-212ENST00000520850 HSD17B14Q9BPX1 270 aa18.3■□□□□ 0.52
TNPO1-212ENST00000520850 LYPLA2O95372 231 aa18.29■□□□□ 0.52
TNPO1-212ENST00000520850 MCM7P33993 719 aa18.29■□□□□ 0.52
TNPO1-212ENST00000520850 IGBP1P78318 339 aa18.29■□□□□ 0.52
TNPO1-212ENST00000520850 PRKCEQ02156 737 aa18.29■□□□□ 0.52
TNPO1-212ENST00000520850 MGAT3Q09327 533 aa18.29■□□□□ 0.52
TNPO1-212ENST00000520850 PDIA5Q14554 519 aa18.29■□□□□ 0.52
TNPO1-212ENST00000520850 MBTPS1Q14703 1052 aa18.29■□□□□ 0.52
TNPO1-212ENST00000520850 PLEKHG4Q58EX7 1191 aa18.29■□□□□ 0.52
TNPO1-212ENST00000520850 CNKSR3Q6P9H4 555 aa18.29■□□□□ 0.52
TNPO1-212ENST00000520850 RUFY4Q6ZNE9 571 aa18.29■□□□□ 0.52
TNPO1-212ENST00000520850 EXOC8Q8IYI6 725 aa18.29■□□□□ 0.52
TNPO1-212ENST00000520850 USP38Q8NB14 1042 aa18.29■□□□□ 0.52
TNPO1-212ENST00000520850 PHOSPHO2Q8TCD6 241 aa18.29■□□□□ 0.52
TNPO1-212ENST00000520850 TMEM60Q9H2L4 133 aa18.29■□□□□ 0.52
TNPO1-212ENST00000520850 ABHD14A-ACY1A0A1B0GW23 586 aa18.28■□□□□ 0.52
TNPO1-212ENST00000520850 SLITRK3O94933 977 aa18.28■□□□□ 0.52
TNPO1-212ENST00000520850 C22orf31O95567 290 aa18.28■□□□□ 0.52
TNPO1-212ENST00000520850 CHRNA1P02708 482 aa18.28■□□□□ 0.52
TNPO1-212ENST00000520850 XRCC6P12956 609 aaKnown RBP eCLIP18.28■□□□□ 0.52
TNPO1-212ENST00000520850 PRPHP41219 470 aa18.28■□□□□ 0.52
TNPO1-212ENST00000520850 TXKP42681 527 aa18.28■□□□□ 0.52
TNPO1-212ENST00000520850 CDC42EP1Q00587 391 aa18.28■□□□□ 0.52
TNPO1-212ENST00000520850 ZNF174Q15697 407 aa18.28■□□□□ 0.52
TNPO1-212ENST00000520850 UGCGQ16739 394 aa18.28■□□□□ 0.52
TNPO1-212ENST00000520850 FAM109BQ6ICB4 259 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms