RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 SDR16C5Q8N3Y7 309 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 TEKT4Q8WW24 435 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 CCT6BQ92526 530 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 DDX27Q96GQ7 796 aaKnown RBP10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 ZSCAN10Q96SZ4 725 aaPredicted RBP10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 TAOK3Q9H2K8 898 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 GDF3Q9NR23 364 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 CLTCQ00610 1675 aaKnown RBP10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 A6NNZ2 444 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 FUT4P22083 530 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 ATP11AP98196 1134 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 CCDC6Q16204 474 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 TUBB8Q3ZCM7 444 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 NAALADL2Q58DX5 795 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 ARHGAP27Q6ZUM4 889 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 ATP11CQ8NB49 1132 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 TEKT1Q969V4 418 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 PHF20Q9BVI0 1012 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 SEMA6BQ9H3T3 888 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 THAP9Q9H5L6 903 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 PLEKHG1Q9ULL1 1385 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 A0A1W2PQC6 194 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 CYP27B1O15528 508 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 NDUFB5O43674 189 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 DIXDC1Q155Q3 683 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 MEA1Q16626 185 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 MIIPQ5JXC2 388 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 HP1BP3Q5SSJ5 553 aaPredicted RBP10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 DENND2CQ68D51 928 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 GJB7Q6PEY0 223 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 ETNK1Q9HBU6 452 aa10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 UTP6Q9NYH9 597 aaKnown RBP10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 ZMYND8Q9ULU4 1186 aaPredicted RBP10.95□□□□□ -0.66
PDGFRB-207ENST00000520579 BICDL2A1A5D9 508 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 IRS4O14654 1257 aaPredicted RBP10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 SCG2P13521 617 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 TUBP50607 506 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 ANKRD20A2Q5SQ80 823 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 FAM83BQ5T0W9 1011 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 ANKRD20A1Q5TYW2 823 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 ANKRD20A3Q5VUR7 823 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 TLDC1Q6P9B6 456 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 USP38Q8NB14 1042 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 DTX3LQ8TDB6 740 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 HOOK2Q96ED9 719 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 TCHPQ9BT92 498 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 RNF26Q9BY78 433 aaPredicted RBP10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 DLGAP2Q9P1A6 1054 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 PLAGL2Q9UPG8 496 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 UTP11Q9Y3A2 253 aaKnown RBP10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 RTCBQ9Y3I0 505 aaKnown RBP10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 DPPA5A6NC42 116 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 FESP07332 822 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 HNRNPCP07910 306 aaKnown RBP eCLIP10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 MYCLP1P12525 358 aaPredicted RBP10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 GYG1P46976 350 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 SLC29A2Q14542 456 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 ASIC2Q16515 512 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 LONRF1Q17RB8 773 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 KIF6Q6ZMV9 814 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 IQCF2Q8IXL9 164 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 BLIDQ8IZY5 108 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 SNRNP27Q8WVK2 155 aaKnown RBP10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 FMO2Q99518 471 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 SERPINA10Q9UK55 444 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 STK36Q9NRP7 1315 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 CHD2O14647 1828 aaKnown RBP10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 GRID2IPA4D2P6 1211 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 HIP1RO75146 1068 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 VIL1P09327 827 aaKnown RBP10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 NQO1P15559 274 aaKnown RBP10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 FECHP22830 423 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 CCDC24Q8N4L8 307 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 METTL13Q8N6R0 699 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 MTA3Q9BTC8 594 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 LUC7LQ9NQ29 371 aaKnown RBP10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 SLC12A6Q9UHW9 1150 aa10.94□□□□□ -0.66
PDGFRB-207ENST00000520579 POTEMA6NI47 508 aa10.93□□□□□ -0.66
PDGFRB-207ENST00000520579 FGFR1OPO95684 399 aaKnown RBP10.93□□□□□ -0.66
PDGFRB-207ENST00000520579 RNF41Q9H4P4 317 aaPredicted RBP10.93□□□□□ -0.66
PDGFRB-207ENST00000520579 MRGBPQ9NV56 204 aa10.93□□□□□ -0.66
PDGFRB-207ENST00000520579 MYH6P13533 1939 aa10.93□□□□□ -0.66
PDGFRB-207ENST00000520579 LAMA4Q16363 1823 aa10.93□□□□□ -0.66
PDGFRB-207ENST00000520579 MST1RQ04912 1400 aa10.93□□□□□ -0.66
PDGFRB-207ENST00000520579 RFC5P40937 340 aa10.93□□□□□ -0.66
PDGFRB-207ENST00000520579 RNF220Q5VTB9 566 aa10.93□□□□□ -0.66
PDGFRB-207ENST00000520579 ADGRA1Q86SQ6 560 aa10.93□□□□□ -0.66
PDGFRB-207ENST00000520579 KCNH5Q8NCM2 988 aa10.93□□□□□ -0.66
PDGFRB-207ENST00000520579 DDX50Q9BQ39 737 aaKnown RBP10.93□□□□□ -0.66
PDGFRB-207ENST00000520579 MAGEB6P1A0A0J9YX57 407 aa10.93□□□□□ -0.66
PDGFRB-207ENST00000520579 ORC4O43929 436 aa10.93□□□□□ -0.66
PDGFRB-207ENST00000520579 ADAMTS2O95450 1211 aa10.93□□□□□ -0.66
PDGFRB-207ENST00000520579 ALOX15P16050 662 aaPredicted RBP10.93□□□□□ -0.66
PDGFRB-207ENST00000520579 KCNJ1P48048 391 aa10.93□□□□□ -0.66
PDGFRB-207ENST00000520579 UBE3CQ15386 1083 aa10.93□□□□□ -0.66
PDGFRB-207ENST00000520579 PPP1R15BQ5SWA1 713 aa10.93□□□□□ -0.66
PDGFRB-207ENST00000520579 PDXDC1Q6P996 788 aa10.93□□□□□ -0.66
PDGFRB-207ENST00000520579 YTHDF3Q7Z739 585 aaKnown RBP10.93□□□□□ -0.66
PDGFRB-207ENST00000520579 PHLDB2Q86SQ0 1253 aa10.93□□□□□ -0.66
PDGFRB-207ENST00000520579 DNAJC10Q8IXB1 793 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms