RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 DPP8Q6V1X1 898 aaPredicted RBP5.76□□□□□ -1.49
SQLE-204ENST00000520493 IFNL2Q8IZJ0 200 aa5.76□□□□□ -1.49
SQLE-204ENST00000520493 TTC9BQ8N6N2 239 aa5.76□□□□□ -1.49
SQLE-204ENST00000520493 CHST13Q8NET6 341 aa5.76□□□□□ -1.49
SQLE-204ENST00000520493 PCDH19Q8TAB3 1148 aa5.76□□□□□ -1.49
SQLE-204ENST00000520493 SAMD11Q96NU1 681 aa5.76□□□□□ -1.49
SQLE-204ENST00000520493 TELO2Q9Y4R8 837 aa5.76□□□□□ -1.49
SQLE-204ENST00000520493 PCDHA9Q9Y5H5 950 aa5.76□□□□□ -1.49
SQLE-204ENST00000520493 CCDC66A2RUB6 948 aa5.75□□□□□ -1.49
SQLE-204ENST00000520493 NPEPPSL1A6NEC2 478 aa5.75□□□□□ -1.49
SQLE-204ENST00000520493 H0Y858 1186 aa5.75□□□□□ -1.49
SQLE-204ENST00000520493 ACVRL1P37023 503 aa5.75□□□□□ -1.49
SQLE-204ENST00000520493 DNM2P50570 870 aa5.75□□□□□ -1.49
SQLE-204ENST00000520493 DBPQ10586 325 aaPredicted RBP5.75□□□□□ -1.49
SQLE-204ENST00000520493 TCEA2Q15560 299 aa5.75□□□□□ -1.49
SQLE-204ENST00000520493 PTPROQ16827 1216 aa5.75□□□□□ -1.49
SQLE-204ENST00000520493 ZNF568Q3ZCX4 644 aa5.75□□□□□ -1.49
SQLE-204ENST00000520493 PHF19Q5T6S3 580 aa5.75□□□□□ -1.49
SQLE-204ENST00000520493 RALYLQ86SE5 291 aaKnown RBP5.75□□□□□ -1.49
SQLE-204ENST00000520493 PTRH1Q86Y79 214 aaKnown RBP5.75□□□□□ -1.49
SQLE-204ENST00000520493 STPG3Q8N7X2 389 aa5.75□□□□□ -1.49
SQLE-204ENST00000520493 MAGEB10Q96LZ2 347 aaPredicted RBP5.75□□□□□ -1.49
SQLE-204ENST00000520493 C8orf49Q96NF6 230 aa5.75□□□□□ -1.49
SQLE-204ENST00000520493 FEZ1Q99689 392 aa5.75□□□□□ -1.49
SQLE-204ENST00000520493 KRTAP3-1Q9BYR8 98 aa5.75□□□□□ -1.49
SQLE-204ENST00000520493 SPC25Q9HBM1 224 aa5.75□□□□□ -1.49
SQLE-204ENST00000520493 SFMBT1Q9UHJ3 866 aa5.75□□□□□ -1.49
SQLE-204ENST00000520493 ESYT3A0FGR9 886 aa5.74□□□□□ -1.49
SQLE-204ENST00000520493 KNG1P01042 644 aa5.74□□□□□ -1.49
SQLE-204ENST00000520493 PPP2CBP62714 309 aa5.74□□□□□ -1.49
SQLE-204ENST00000520493 PPP2CAP67775 309 aa5.74□□□□□ -1.49
SQLE-204ENST00000520493 SQSTM1Q13501 440 aa5.74□□□□□ -1.49
SQLE-204ENST00000520493 Q6ZUG5 572 aa5.74□□□□□ -1.49
SQLE-204ENST00000520493 OSTM1Q86WC4 334 aa5.74□□□□□ -1.49
SQLE-204ENST00000520493 REXO1L1PQ8IX06 675 aa5.74□□□□□ -1.49
SQLE-204ENST00000520493 SH3RF2Q8TEC5 729 aa5.74□□□□□ -1.49
SQLE-204ENST00000520493 KISS1RQ969F8 398 aaPredicted RBP5.74□□□□□ -1.49
SQLE-204ENST00000520493 MBD6Q96DN6 1003 aa5.74□□□□□ -1.49
SQLE-204ENST00000520493 RBM15Q96T37 977 aaKnown RBP eCLIP5.74□□□□□ -1.49
SQLE-204ENST00000520493 KCND1Q9NSA2 647 aa5.74□□□□□ -1.49
SQLE-204ENST00000520493 ADAM29Q9UKF5 820 aa5.74□□□□□ -1.49
SQLE-204ENST00000520493 NOP58Q9Y2X3 529 aaKnown RBP5.74□□□□□ -1.49
SQLE-204ENST00000520493 TCRBV5S4A2TA0A5A2 114 aa5.73□□□□□ -1.49
SQLE-204ENST00000520493 PRAMEF25A6NGN4 478 aa5.73□□□□□ -1.49
SQLE-204ENST00000520493 ACOT7O00154 380 aa5.73□□□□□ -1.49
SQLE-204ENST00000520493 MAN2B1O00754 1011 aa5.73□□□□□ -1.49
SQLE-204ENST00000520493 B4GALT4O60513 344 aa5.73□□□□□ -1.49
SQLE-204ENST00000520493 DNAJC6O75061 913 aa5.73□□□□□ -1.49
SQLE-204ENST00000520493 KLHL18O94889 574 aa5.73□□□□□ -1.49
SQLE-204ENST00000520493 COL6A1P12109 1028 aa5.73□□□□□ -1.49
SQLE-204ENST00000520493 SPRED1Q7Z699 444 aa5.73□□□□□ -1.49
SQLE-204ENST00000520493 CIR1Q86X95 450 aaPredicted RBP5.73□□□□□ -1.49
SQLE-204ENST00000520493 NUDT10Q8NFP7 164 aa5.73□□□□□ -1.49
SQLE-204ENST00000520493 WDR48Q8TAF3 677 aa5.73□□□□□ -1.49
SQLE-204ENST00000520493 NUDT11Q96G61 164 aa5.73□□□□□ -1.49
SQLE-204ENST00000520493 TACO1Q9BSH4 297 aaKnown RBP5.73□□□□□ -1.49
SQLE-204ENST00000520493 SLC52A2Q9HAB3 445 aa5.73□□□□□ -1.49
SQLE-204ENST00000520493 SLC39A2Q9NP94 309 aa5.73□□□□□ -1.49
SQLE-204ENST00000520493 CBLCQ9ULV8 474 aa5.73□□□□□ -1.49
SQLE-204ENST00000520493 PLAAQ9Y263 795 aa5.73□□□□□ -1.49
SQLE-204ENST00000520493 ZNF561-AS1K7EIQ3 104 aa5.72□□□□□ -1.49
SQLE-204ENST00000520493 CLASP2O75122 1294 aaKnown RBP5.72□□□□□ -1.49
SQLE-204ENST00000520493 EPHB4P54760 987 aa5.72□□□□□ -1.49
SQLE-204ENST00000520493 JAM2P57087 298 aa5.72□□□□□ -1.49
SQLE-204ENST00000520493 IGBP1P78318 339 aa5.72□□□□□ -1.49
SQLE-204ENST00000520493 SLFN13Q68D06 897 aa5.72□□□□□ -1.49
SQLE-204ENST00000520493 CISD2Q8N5K1 135 aaKnown RBP5.72□□□□□ -1.49
SQLE-204ENST00000520493 MRPL4Q9BYD3 311 aaKnown RBP5.72□□□□□ -1.49
SQLE-204ENST00000520493 KANSL2Q9H9L4 492 aa5.72□□□□□ -1.49
SQLE-204ENST00000520493 IFT57Q9NWB7 429 aa5.72□□□□□ -1.49
SQLE-204ENST00000520493 PTCH2Q9Y6C5 1203 aa5.72□□□□□ -1.49
SQLE-204ENST00000520493 hCG_2014768A0A024R1R8 64 aa5.71□□□□□ -1.5
SQLE-204ENST00000520493 FAM90A27PA6NNH2 459 aa5.71□□□□□ -1.5
SQLE-204ENST00000520493 CUTAO60888 179 aa5.71□□□□□ -1.5
SQLE-204ENST00000520493 RFPL3O75679 317 aa5.71□□□□□ -1.5
SQLE-204ENST00000520493 NPTXRO95502 500 aa5.71□□□□□ -1.5
SQLE-204ENST00000520493 AMY2AP04746 511 aa5.71□□□□□ -1.5
SQLE-204ENST00000520493 AMY2BP19961 511 aa5.71□□□□□ -1.5
SQLE-204ENST00000520493 PTGS1P23219 599 aa5.71□□□□□ -1.5
SQLE-204ENST00000520493 GYS2P54840 703 aa5.71□□□□□ -1.5
SQLE-204ENST00000520493 HERVK_113P62684 666 aa5.71□□□□□ -1.5
SQLE-204ENST00000520493 LACTBP83111 547 aaPredicted RBP5.71□□□□□ -1.5
SQLE-204ENST00000520493 USP10Q14694 798 aaKnown RBP5.71□□□□□ -1.5
SQLE-204ENST00000520493 WDR72Q3MJ13 1102 aa5.71□□□□□ -1.5
SQLE-204ENST00000520493 TRIM61Q5EBN2 209 aa5.71□□□□□ -1.5
SQLE-204ENST00000520493 USP51Q70EK9 711 aa5.71□□□□□ -1.5
SQLE-204ENST00000520493 LIMS2Q7Z4I7 341 aa5.71□□□□□ -1.5
SQLE-204ENST00000520493 FILIP1Q7Z7B0 1213 aa5.71□□□□□ -1.5
SQLE-204ENST00000520493 GSTCDQ8NEC7 633 aa5.71□□□□□ -1.5
SQLE-204ENST00000520493 SH3RF3Q8TEJ3 882 aaPredicted RBP5.71□□□□□ -1.5
SQLE-204ENST00000520493 AJUBAQ96IF1 538 aa5.71□□□□□ -1.5
SQLE-204ENST00000520493 C1QTNF3Q9BXJ4 246 aa5.71□□□□□ -1.5
SQLE-204ENST00000520493 CELF4Q9BZC1 486 aaKnown RBP5.71□□□□□ -1.5
SQLE-204ENST00000520493 INCENPQ9NQS7 918 aa5.71□□□□□ -1.5
SQLE-204ENST00000520493 PPP4R1LQ9P1A2 415 aa5.71□□□□□ -1.5
SQLE-204ENST00000520493 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.7□□□□□ -1.5
SQLE-204ENST00000520493 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.7□□□□□ -1.5
SQLE-204ENST00000520493 HIP1RO75146 1068 aa5.7□□□□□ -1.5
SQLE-204ENST00000520493 RASGRP1O95267 797 aa5.7□□□□□ -1.5
SQLE-204ENST00000520493 IL18BPO95998 194 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms