RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 AFG1LQ8WV93 481 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 SLC7A3Q8WY07 619 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 FGD4Q96M96 766 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 AK8Q96MA6 479 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 LARP6Q9BRS8 491 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 KATNBL1Q9H079 304 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 NT5C3AQ9H0P0 336 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 TUT1Q9H6E5 874 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 AGO4Q9HCK5 861 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 PRDM5Q9NQX1 630 aaPredicted RBP6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 ZNF302Q9NR11 478 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 TMEM39AQ9NV64 488 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 COL20A1Q9P218 1284 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 KCNJ14Q9UNX9 436 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 LHX6Q9UPM6 363 aa6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 ZNFX1Q9P2E3 1918 aaKnown RBP6.32□□□□□ -1.4
CTNNA1-220ENST00000520260 LRRC37A2A6NM11 1700 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 A0A1W2PPC1 479 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 STX6O43752 255 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 HBP1O60381 514 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 JAK2O60674 1132 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 PQBP1O60828 265 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 LGALS2P05162 132 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 NUDT7P0C024 238 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 OR52Z1P0C646 297 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 COL6A1P12109 1028 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 HOXD8P13378 290 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 TAL1P17542 331 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 ITGB5P18084 799 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 SCP2P22307 547 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 U2AF2P26368 475 aaKnown RBP eCLIP6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 PRPHP41219 470 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 PSEN2P49810 448 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 RTP1P59025 263 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 ACTR2P61160 394 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 PSMC5P62195 406 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 MRPS9P82933 396 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 SP4Q02446 784 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 PPFIA1Q13136 1202 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 PTK7Q13308 1070 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 KIAA0753Q2KHM9 967 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 ZNF484Q5JVG2 852 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 PRPF38BQ5VTL8 546 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 IER5Q5VY09 327 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 ANO1Q5XXA6 986 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 ARL6IP4Q66PJ3 421 aaKnown RBP6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 PSRC1Q6PGN9 363 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 TRAF7Q6Q0C0 670 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 CXCL17Q6UXB2 119 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 DTHD1Q6ZMT9 781 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 NME8Q8N427 588 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 USP38Q8NB14 1042 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 TMEM87AQ8NBN3 555 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 AFAP1L1Q8TED9 768 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 TCP11Q8WWU5 503 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 BBXQ8WY36 941 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 TBC1D5Q92609 795 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 FERMT2Q96AC1 680 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 CALML4Q96GE6 196 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 GPR20Q99678 358 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 INO80BQ9C086 356 aaPredicted RBP6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 LRRC27Q9C0I9 530 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 ZSWIM4Q9H7M6 989 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 PDGFCQ9NRA1 345 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 DISC1Q9NRI5 854 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 TMEM260Q9NX78 707 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 ZSWIM8A7E2V4 1837 aa6.31□□□□□ -1.4
CTNNA1-220ENST00000520260 BAZ2BQ9UIF8 2168 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 SYCE3A1L190 88 aa6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 CARNS1A5YM72 827 aa6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 GOLGA6L4A6NEF3 574 aa6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 BTBD18B2RXH4 712 aa6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 TK2O00142 265 aa6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 ARHGAP33O14559 1287 aa6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 LARGE1O95461 756 aa6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 CTDNEP1O95476 244 aa6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 PTMAP06454 111 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 P4HBP07237 508 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 CHRM1P11229 460 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 KCNA2P16389 499 aa6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 MCM7P33993 719 aa6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 RFC5P40937 340 aa6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 QARSP47897 775 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 BEX3Q00994 111 aa6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 FPGSQ05932 587 aa6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 PPP2R5CQ13362 524 aa6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 PDIA5Q14554 519 aa6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 NOLC1Q14978 699 aaKnown RBP eCLIP6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 SNX17Q15036 470 aa6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 PCBP1Q15365 356 aaKnown RBP eCLIP6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 SYCP1Q15431 976 aa6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 PTGISQ16647 500 aa6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 SLC35G1Q2M3R5 365 aa6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 XKR3Q5GH77 459 aa6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 TAF3Q5VWG9 929 aa6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 NCAPH2Q6IBW4 605 aa6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 TYW1BQ6NUM6 668 aa6.3□□□□□ -1.4
CTNNA1-220ENST00000520260 C7orf61Q8IZ16 206 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms