RNA–Protein interactions for RNA: ENST00000520003.5

CSGALNACT1-208, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 4

Gene CSGALNACT1, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-208ENST00000520003 CALM2P0DP24 149 aa17.97■□□□□ 0.47
CSGALNACT1-208ENST00000520003 CALM3P0DP25 149 aa17.97■□□□□ 0.47
CSGALNACT1-208ENST00000520003 NDUFV1P49821 464 aa17.97■□□□□ 0.47
CSGALNACT1-208ENST00000520003 MTMR1Q13613 665 aa17.97■□□□□ 0.47
CSGALNACT1-208ENST00000520003 UBE2SQ16763 222 aa17.97■□□□□ 0.47
CSGALNACT1-208ENST00000520003 IER5Q5VY09 327 aa17.97■□□□□ 0.47
CSGALNACT1-208ENST00000520003 NFXL1Q6ZNB6 911 aa17.97■□□□□ 0.47
CSGALNACT1-208ENST00000520003 TMTC3Q6ZXV5 915 aa17.97■□□□□ 0.47
CSGALNACT1-208ENST00000520003 SGMS1Q86VZ5 419 aa17.97■□□□□ 0.47
CSGALNACT1-208ENST00000520003 RAB11FIP4Q86YS3 637 aa17.97■□□□□ 0.47
CSGALNACT1-208ENST00000520003 KLHL23Q8NBE8 558 aa17.97■□□□□ 0.47
CSGALNACT1-208ENST00000520003 PPP2R3CQ969Q6 453 aa17.97■□□□□ 0.47
CSGALNACT1-208ENST00000520003 PSTPIP2Q9H939 334 aa17.97■□□□□ 0.47
CSGALNACT1-208ENST00000520003 JADE2Q9NQC1 790 aa17.97■□□□□ 0.47
CSGALNACT1-208ENST00000520003 PADI3Q9ULW8 664 aa17.97■□□□□ 0.47
CSGALNACT1-208ENST00000520003 KDM3AQ9Y4C1 1321 aa17.97■□□□□ 0.47
CSGALNACT1-208ENST00000520003 hCG_1642624A0A1W2PR95 340 aa17.96■□□□□ 0.47
CSGALNACT1-208ENST00000520003 CSPG5O95196 566 aa17.96■□□□□ 0.47
CSGALNACT1-208ENST00000520003 TRIM67Q6ZTA4 783 aa17.96■□□□□ 0.47
CSGALNACT1-208ENST00000520003 PRSS33Q8NF86 280 aa17.96■□□□□ 0.47
CSGALNACT1-208ENST00000520003 POF1BQ8WVV4 589 aa17.96■□□□□ 0.47
CSGALNACT1-208ENST00000520003 LRRC2Q9BYS8 371 aa17.96■□□□□ 0.47
CSGALNACT1-208ENST00000520003 FAM49AQ9H0Q0 323 aaPredicted RBP17.96■□□□□ 0.47
CSGALNACT1-208ENST00000520003 PCDHA2Q9Y5H9 948 aa17.96■□□□□ 0.47
CSGALNACT1-208ENST00000520003 TRPV2Q9Y5S1 764 aa17.96■□□□□ 0.47
CSGALNACT1-208ENST00000520003 KIAA1671Q9BY89 1806 aa17.95■□□□□ 0.46
CSGALNACT1-208ENST00000520003 STAG3L1P0CL83 205 aa17.95■□□□□ 0.46
CSGALNACT1-208ENST00000520003 IGBP1P78318 339 aa17.95■□□□□ 0.46
CSGALNACT1-208ENST00000520003 FANCBQ8NB91 859 aa17.95■□□□□ 0.46
CSGALNACT1-208ENST00000520003 TMX1Q9H3N1 280 aa17.95■□□□□ 0.46
CSGALNACT1-208ENST00000520003 SLC12A7Q9Y666 1083 aa17.95■□□□□ 0.46
CSGALNACT1-208ENST00000520003 LOXHD1Q8IVV2 1947 aa17.94■□□□□ 0.46
CSGALNACT1-208ENST00000520003 TMEM221A6NGB7 291 aa17.94■□□□□ 0.46
CSGALNACT1-208ENST00000520003 M0R296 226 aa17.94■□□□□ 0.46
CSGALNACT1-208ENST00000520003 SCG2P13521 617 aa17.94■□□□□ 0.46
CSGALNACT1-208ENST00000520003 NRIP1P48552 1158 aa17.94■□□□□ 0.46
CSGALNACT1-208ENST00000520003 GATMP50440 423 aa17.94■□□□□ 0.46
CSGALNACT1-208ENST00000520003 PAN2Q504Q3 1202 aaKnown RBP17.94■□□□□ 0.46
CSGALNACT1-208ENST00000520003 IER5LQ5T953 404 aa17.94■□□□□ 0.46
CSGALNACT1-208ENST00000520003 FAM43BQ6ZT52 329 aaPredicted RBP17.94■□□□□ 0.46
CSGALNACT1-208ENST00000520003 CCDC82Q8N4S0 544 aa17.94■□□□□ 0.46
CSGALNACT1-208ENST00000520003 PHOX2BQ99453 314 aa17.94■□□□□ 0.46
CSGALNACT1-208ENST00000520003 CELF4Q9BZC1 486 aaKnown RBP17.94■□□□□ 0.46
CSGALNACT1-208ENST00000520003 JPH1Q9HDC5 661 aaPredicted RBP17.94■□□□□ 0.46
CSGALNACT1-208ENST00000520003 PKD2L1Q9P0L9 805 aa17.94■□□□□ 0.46
CSGALNACT1-208ENST00000520003 SLC9A2Q9UBY0 812 aa17.94■□□□□ 0.46
CSGALNACT1-208ENST00000520003 PCDHA6Q9UN73 950 aa17.94■□□□□ 0.46
CSGALNACT1-208ENST00000520003 USP15Q9Y4E8 981 aaPredicted RBP17.94■□□□□ 0.46
CSGALNACT1-208ENST00000520003 PCDHA8Q9Y5H6 950 aa17.94■□□□□ 0.46
CSGALNACT1-208ENST00000520003 CNTNAP5Q8WYK1 1306 aa17.94■□□□□ 0.46
CSGALNACT1-208ENST00000520003 SMIM35A0A1B0GVV1 85 aa17.93■□□□□ 0.46
CSGALNACT1-208ENST00000520003 SPDYE3A6NKU9 549 aa17.93■□□□□ 0.46
CSGALNACT1-208ENST00000520003 ZXDAP98168 799 aa17.93■□□□□ 0.46
CSGALNACT1-208ENST00000520003 TMEM62Q0P6H9 643 aa17.93■□□□□ 0.46
CSGALNACT1-208ENST00000520003 PAK2Q13177 524 aa17.93■□□□□ 0.46
CSGALNACT1-208ENST00000520003 PLCB4Q15147 1175 aa17.93■□□□□ 0.46
CSGALNACT1-208ENST00000520003 PKN1Q16512 942 aa17.93■□□□□ 0.46
CSGALNACT1-208ENST00000520003 TYW1BQ6NUM6 668 aa17.93■□□□□ 0.46
CSGALNACT1-208ENST00000520003 PLPPR4Q7Z2D5 763 aa17.93■□□□□ 0.46
CSGALNACT1-208ENST00000520003 MICU3Q86XE3 530 aa17.93■□□□□ 0.46
CSGALNACT1-208ENST00000520003 ATP8B4Q8TF62 1192 aa17.93■□□□□ 0.46
CSGALNACT1-208ENST00000520003 TRAPPC12Q8WVT3 735 aa17.93■□□□□ 0.46
CSGALNACT1-208ENST00000520003 ANO2Q9NQ90 1003 aa17.93■□□□□ 0.46
CSGALNACT1-208ENST00000520003 KCNH7Q9NS40 1196 aa17.93■□□□□ 0.46
CSGALNACT1-208ENST00000520003 BARX2Q9UMQ3 279 aaPredicted RBP17.93■□□□□ 0.46
CSGALNACT1-208ENST00000520003 PCDHGC5Q9Y5F6 944 aa17.93■□□□□ 0.46
CSGALNACT1-208ENST00000520003 M0QZ92 97 aa17.92■□□□□ 0.46
CSGALNACT1-208ENST00000520003 ATG7O95352 703 aa17.92■□□□□ 0.46
CSGALNACT1-208ENST00000520003 SARSP49591 514 aaKnown RBP17.92■□□□□ 0.46
CSGALNACT1-208ENST00000520003 UBE3AQ05086 875 aa17.92■□□□□ 0.46
CSGALNACT1-208ENST00000520003 FUT2Q10981 343 aa17.92■□□□□ 0.46
CSGALNACT1-208ENST00000520003 WWC2Q6AWC2 1192 aa17.92■□□□□ 0.46
CSGALNACT1-208ENST00000520003 APOA5Q6Q788 366 aa17.92■□□□□ 0.46
CSGALNACT1-208ENST00000520003 HEATR3Q7Z4Q2 680 aa17.92■□□□□ 0.46
CSGALNACT1-208ENST00000520003 NME8Q8N427 588 aa17.92■□□□□ 0.46
CSGALNACT1-208ENST00000520003 SUSD6Q92537 303 aa17.92■□□□□ 0.46
CSGALNACT1-208ENST00000520003 TNPO1Q92973 898 aaKnown RBP17.92■□□□□ 0.46
CSGALNACT1-208ENST00000520003 PBXIP1Q96AQ6 731 aa17.92■□□□□ 0.46
CSGALNACT1-208ENST00000520003 MXRA8Q9BRK3 442 aa17.92■□□□□ 0.46
CSGALNACT1-208ENST00000520003 PHF7Q9BWX1 381 aaPredicted RBP17.92■□□□□ 0.46
CSGALNACT1-208ENST00000520003 TRPC6Q9Y210 931 aa17.92■□□□□ 0.46
CSGALNACT1-208ENST00000520003 NFASCO94856 1347 aa17.92■□□□□ 0.46
CSGALNACT1-208ENST00000520003 USP34Q70CQ2 3546 aa17.92■□□□□ 0.46
CSGALNACT1-208ENST00000520003 MGEA5O60502 916 aa17.91■□□□□ 0.46
CSGALNACT1-208ENST00000520003 ATF7P17544 494 aaPredicted RBP17.91■□□□□ 0.46
CSGALNACT1-208ENST00000520003 PTPN5P54829 565 aa17.91■□□□□ 0.46
CSGALNACT1-208ENST00000520003 ACTR2P61160 394 aa17.91■□□□□ 0.46
CSGALNACT1-208ENST00000520003 RBM23Q86U06 439 aaKnown RBP17.91■□□□□ 0.46
CSGALNACT1-208ENST00000520003 VN1R2Q8NFZ6 395 aa17.91■□□□□ 0.46
CSGALNACT1-208ENST00000520003 CYP2W1Q8TAV3 490 aa17.91■□□□□ 0.46
CSGALNACT1-208ENST00000520003 PRRX2Q99811 253 aa17.91■□□□□ 0.46
CSGALNACT1-208ENST00000520003 AZI2Q9H6S1 392 aa17.91■□□□□ 0.46
CSGALNACT1-208ENST00000520003 ERVK-5Q9HDB9 667 aa17.91■□□□□ 0.46
CSGALNACT1-208ENST00000520003 IGKV6D-21A0A0A0MT36 114 aa17.9■□□□□ 0.46
CSGALNACT1-208ENST00000520003 SLC26A2P50443 739 aa17.9■□□□□ 0.46
CSGALNACT1-208ENST00000520003 STAT5BP51692 787 aa17.9■□□□□ 0.46
CSGALNACT1-208ENST00000520003 KRT76Q01546 638 aa17.9■□□□□ 0.46
CSGALNACT1-208ENST00000520003 EXOSC10Q01780 885 aaKnown RBP17.9■□□□□ 0.46
CSGALNACT1-208ENST00000520003 TCF15Q12870 199 aa17.9■□□□□ 0.46
CSGALNACT1-208ENST00000520003 KCNC3Q14003 757 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms