RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 TAF1DQ9H5J8 278 aaPredicted RBP12.41□□□□□ -0.42
NUDCD1-203ENST00000519607 TYW1Q9NV66 732 aaKnown RBP12.41□□□□□ -0.42
NUDCD1-203ENST00000519607 USP21Q9UK80 565 aa12.41□□□□□ -0.42
NUDCD1-203ENST00000519607 PACSIN2Q9UNF0 486 aaPredicted RBP12.41□□□□□ -0.42
NUDCD1-203ENST00000519607 KIF4AO95239 1232 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 SLC9A1P19634 815 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 PON1P27169 355 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 PRKCIP41743 596 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 SCNN1DP51172 638 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 RNASE9P60153 205 aaKnown RBP12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 HLTFQ14527 1009 aaKnown RBP eCLIP12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 CERKLQ49MI3 558 aaPredicted RBP12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 DCAF17Q5H9S7 520 aaPredicted RBP12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 SFR1Q86XK3 245 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 SPATS2Q86XZ4 545 aaKnown RBP12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 ETNPPLQ8TBG4 499 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 ACTRT1Q8TDG2 376 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 REEP2Q9BRK0 252 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 NAGPAQ9UK23 515 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 INTUQ9ULD6 942 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 LRRC37AA6NMS7 1700 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 UBR3Q6ZT12 1888 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 ESYT3A0FGR9 886 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 HMGB1P1B2RPK0 211 aaPredicted RBP12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 CCDC188H7C350 402 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 MEIS2O14770 477 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 CEP104O60308 925 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 KRT14P02533 472 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 EEF2P13639 858 aaKnown RBP12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 GUCY2FP51841 1108 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 ZNF571Q7Z3V5 609 aaPredicted RBP12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 FBXO11Q86XK2 927 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 FMNL3Q8IVF7 1028 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 KLHL7Q8IXQ5 586 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 CERS5Q8N5B7 392 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 CASKIN2Q8WXE0 1202 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 LRRC45Q96CN5 670 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 ISCUQ9H1K1 167 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 EFCC1Q9HA90 598 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 TMEM59LQ9UK28 342 aa12.4□□□□□ -0.42
NUDCD1-203ENST00000519607 A0A0A6YYK5 440 aaPredicted RBP12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 GTPBP10A4D1E9 387 aaKnown RBP12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 KLRG2A4D1S0 409 aaPredicted RBP12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 TMCO5BA8MYB1 307 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 PGRMC1O00264 195 aaKnown RBP12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 NDUFAB1O14561 156 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 RAD51CO43502 376 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 NR3C1P04150 777 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 H2AFZP0C0S5 128 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 FAM153BP0C7A2 387 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 ACTN1P12814 892 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 FERP16591 822 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 GAP43P17677 238 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 ZNF76P36508 570 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 SPIRE1Q08AE8 756 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 IKQ13123 557 aaPredicted RBP12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 FAM153CQ494X1 144 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 KDM7AQ6ZMT4 941 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 H2AFVQ71UI9 128 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 EPM2AIP1Q7L775 607 aaPredicted RBP12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 PEX26Q7Z412 305 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 PI4KBQ9UBF8 816 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 FAM153AQ9UHL3 310 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 LTBP1Q14766 1721 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 GRIN2DO15399 1336 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 MEIS1O00470 390 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 GFPT2O94808 682 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 GCNT3O95395 438 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 SREBF1P36956 1147 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 CASP5P51878 434 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 BMT2Q1RMZ1 405 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 KCTD16Q68DU8 428 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 MAATS1Q7Z4T9 603 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 TADA2BQ86TJ2 420 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 ARFGAP2Q8N6H7 521 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 CCDC26Q8TAB7 109 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.39□□□□□ -0.439e-6■■■■■ 27.7
NUDCD1-203ENST00000519607 GCNT4Q9P109 453 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 RABGAP1Q9Y3P9 1069 aa12.39□□□□□ -0.43
NUDCD1-203ENST00000519607 THSD7AQ9UPZ6 1657 aa12.38□□□□□ -0.43
NUDCD1-203ENST00000519607 ZSCAN5CA6NGD5 496 aaPredicted RBP12.38□□□□□ -0.43
NUDCD1-203ENST00000519607 ZNF233A6NK53 670 aa12.38□□□□□ -0.43
NUDCD1-203ENST00000519607 CCDC172P0C7W6 258 aa12.38□□□□□ -0.43
NUDCD1-203ENST00000519607 SPATA31C1P0DKV0 1188 aa12.38□□□□□ -0.43
NUDCD1-203ENST00000519607 HSPA9P38646 679 aaKnown RBP12.38□□□□□ -0.43
NUDCD1-203ENST00000519607 STAT1P42224 750 aa12.38□□□□□ -0.43
NUDCD1-203ENST00000519607 NPEPPSP55786 919 aa12.38□□□□□ -0.43
NUDCD1-203ENST00000519607 PSMC6P62333 389 aa12.38□□□□□ -0.43
NUDCD1-203ENST00000519607 TRAF1Q13077 416 aa12.38□□□□□ -0.43
NUDCD1-203ENST00000519607 EPHA7Q15375 998 aa12.38□□□□□ -0.43
NUDCD1-203ENST00000519607 EMC10Q5UCC4 262 aa12.38□□□□□ -0.43
NUDCD1-203ENST00000519607 APOBEC3HQ6NTF7 200 aaKnown RBP12.38□□□□□ -0.43
NUDCD1-203ENST00000519607 LRIG3Q6UXM1 1119 aa12.38□□□□□ -0.43
NUDCD1-203ENST00000519607 MICALCLQ6ZW33 695 aa12.38□□□□□ -0.43
NUDCD1-203ENST00000519607 SCFD2Q8WU76 684 aa12.38□□□□□ -0.43
NUDCD1-203ENST00000519607 CRYGNQ8WXF5 182 aa12.38□□□□□ -0.43
NUDCD1-203ENST00000519607 ATP6V1G3Q96LB4 118 aa12.38□□□□□ -0.43
NUDCD1-203ENST00000519607 POLR3CQ9BUI4 534 aaPredicted RBP12.38□□□□□ -0.43
NUDCD1-203ENST00000519607 FAM169AQ9Y6X4 670 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms