RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 ZBTB42B2RXF5 422 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 ENPP3O14638 875 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 TLL1O43897 1013 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 EFCAB14O75071 495 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 PSMD10O75832 226 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 GJB5O95377 273 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 KCNJ6P48051 423 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 LPIN1Q14693 890 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 Q4G0T1 1027 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 FAM160B1Q5W0V3 765 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 PPP2R2DQ66LE6 453 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 PDXDC2PQ6P474 469 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 MTHFD1LQ6UB35 978 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 SPRED2Q7Z698 418 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 RTN4RL1Q86UN2 441 aaPredicted RBP10.59□□□□□ -0.71
HDAC3-215ENST00000519474 OXER1Q8TDS5 423 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 SLC5A5Q92911 643 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 TOP1MTQ969P6 601 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 RIT2Q99578 217 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 RAD9AQ99638 391 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 KIF2CQ99661 725 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 ZBED2Q9BTP6 218 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 C22orf23Q9BZE7 217 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 CERS4Q9HA82 394 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 CDHR5Q9HBB8 845 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 ORC3Q9UBD5 711 aaPredicted RBP10.59□□□□□ -0.71
HDAC3-215ENST00000519474 TUBE1Q9UJT0 475 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 TRPC6Q9Y210 931 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 PCDHA10Q9Y5I2 948 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 CDY2AQ9Y6F7 541 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 BACH1O14867 736 aa10.58□□□□□ -0.72
HDAC3-215ENST00000519474 CDKL5O76039 1030 aa10.58□□□□□ -0.72
HDAC3-215ENST00000519474 TDP2O95551 362 aa10.58□□□□□ -0.72
HDAC3-215ENST00000519474 PSAPP07602 524 aa10.58□□□□□ -0.72
HDAC3-215ENST00000519474 POU3F3P20264 500 aaPredicted RBP10.58□□□□□ -0.72
HDAC3-215ENST00000519474 IGFBP4P22692 258 aa10.58□□□□□ -0.72
HDAC3-215ENST00000519474 SETQ01105 290 aaPredicted RBP10.58□□□□□ -0.72
HDAC3-215ENST00000519474 INF2Q27J81 1249 aa10.58□□□□□ -0.72
HDAC3-215ENST00000519474 C8orf34Q49A92 452 aa10.58□□□□□ -0.72
HDAC3-215ENST00000519474 ZNF484Q5JVG2 852 aa10.58□□□□□ -0.72
HDAC3-215ENST00000519474 FBXO47Q5MNV8 452 aa10.58□□□□□ -0.72
HDAC3-215ENST00000519474 FAM117BQ6P1L5 589 aa10.58□□□□□ -0.72
HDAC3-215ENST00000519474 B3GNT9Q6UX72 402 aa10.58□□□□□ -0.72
HDAC3-215ENST00000519474 TRMT1LQ7Z2T5 733 aaKnown RBP10.58□□□□□ -0.72
HDAC3-215ENST00000519474 RSPH3Q86UC2 560 aa10.58□□□□□ -0.72
HDAC3-215ENST00000519474 KIAA0319LQ8IZA0 1049 aa10.58□□□□□ -0.72
HDAC3-215ENST00000519474 NME8Q8N427 588 aa10.58□□□□□ -0.72
HDAC3-215ENST00000519474 USP38Q8NB14 1042 aa10.58□□□□□ -0.72
HDAC3-215ENST00000519474 ATP8B4Q8TF62 1192 aa10.58□□□□□ -0.72
HDAC3-215ENST00000519474 GAS2L1Q99501 681 aaPredicted RBP10.58□□□□□ -0.72
HDAC3-215ENST00000519474 AGO3Q9H9G7 860 aaKnown RBP10.58□□□□□ -0.72
HDAC3-215ENST00000519474 DISC1Q9NRI5 854 aa10.58□□□□□ -0.72
HDAC3-215ENST00000519474 GABBR1Q9UBS5 961 aa10.58□□□□□ -0.72
HDAC3-215ENST00000519474 SQORQ9Y6N5 450 aa10.58□□□□□ -0.72
HDAC3-215ENST00000519474 STK36Q9NRP7 1315 aa10.58□□□□□ -0.72
HDAC3-215ENST00000519474 GBF1Q92538 1859 aa10.57□□□□□ -0.72
HDAC3-215ENST00000519474 ZNF862O60290 1169 aa10.57□□□□□ -0.72
HDAC3-215ENST00000519474 STBD1O95210 358 aa10.57□□□□□ -0.72
HDAC3-215ENST00000519474 GHRP10912 638 aa10.57□□□□□ -0.72
HDAC3-215ENST00000519474 MRPS6P82932 125 aaKnown RBP10.57□□□□□ -0.72
HDAC3-215ENST00000519474 HTRA4P83105 476 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-215ENST00000519474 KRT76Q01546 638 aa10.57□□□□□ -0.72
HDAC3-215ENST00000519474 ST3GAL1Q11201 340 aa10.57□□□□□ -0.72
HDAC3-215ENST00000519474 NONOQ15233 471 aaKnown RBP eCLIP10.57□□□□□ -0.72
HDAC3-215ENST00000519474 EARS2Q5JPH6 523 aaKnown RBP10.57□□□□□ -0.72
HDAC3-215ENST00000519474 IER5Q5VY09 327 aa10.57□□□□□ -0.72
HDAC3-215ENST00000519474 MOXD1Q6UVY6 613 aa10.57□□□□□ -0.72
HDAC3-215ENST00000519474 KRT25Q7Z3Z0 450 aa10.57□□□□□ -0.72
HDAC3-215ENST00000519474 SMAP1Q8IYB5 467 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-215ENST00000519474 NSUN7Q8NE18 718 aaKnown RBP10.57□□□□□ -0.72
HDAC3-215ENST00000519474 BBXQ8WY36 941 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-215ENST00000519474 PPM1EQ8WY54 764 aa10.57□□□□□ -0.72
HDAC3-215ENST00000519474 APBB2Q92870 758 aa10.57□□□□□ -0.72
HDAC3-215ENST00000519474 NAP1L5Q96NT1 182 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-215ENST00000519474 IFIH1Q9BYX4 1025 aaKnown RBP10.57□□□□□ -0.72
HDAC3-215ENST00000519474 CELF4Q9BZC1 486 aaKnown RBP10.57□□□□□ -0.72
HDAC3-215ENST00000519474 FAM49AQ9H0Q0 323 aaPredicted RBP10.57□□□□□ -0.72
HDAC3-215ENST00000519474 UNC45AQ9H3U1 944 aa10.57□□□□□ -0.72
HDAC3-215ENST00000519474 PRDM6Q9NQX0 595 aa10.57□□□□□ -0.72
HDAC3-215ENST00000519474 INSL6Q9Y581 213 aa10.57□□□□□ -0.72
HDAC3-215ENST00000519474 TANC1Q9C0D5 1861 aa10.56□□□□□ -0.72
HDAC3-215ENST00000519474 LINC01553A4QN01 128 aa10.56□□□□□ -0.72
HDAC3-215ENST00000519474 LPXNO60711 386 aa10.56□□□□□ -0.72
HDAC3-215ENST00000519474 UPP2O95045 317 aa10.56□□□□□ -0.72
HDAC3-215ENST00000519474 AMHP03971 560 aa10.56□□□□□ -0.72
HDAC3-215ENST00000519474 ERVK-21P61565 698 aa10.56□□□□□ -0.72
HDAC3-215ENST00000519474 TMEM62Q0P6H9 643 aa10.56□□□□□ -0.72
HDAC3-215ENST00000519474 CCDC85BQ15834 202 aaPredicted RBP10.56□□□□□ -0.72
HDAC3-215ENST00000519474 LETM2Q2VYF4 491 aa10.56□□□□□ -0.72
HDAC3-215ENST00000519474 PPP4R3AQ6IN85 833 aa10.56□□□□□ -0.72
HDAC3-215ENST00000519474 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.56□□□□□ -0.72
HDAC3-215ENST00000519474 CKAP2LQ8IYA6 745 aa10.56□□□□□ -0.72
HDAC3-215ENST00000519474 MYOCDQ8IZQ8 938 aa10.56□□□□□ -0.72
HDAC3-215ENST00000519474 ETNPPLQ8TBG4 499 aa10.56□□□□□ -0.72
HDAC3-215ENST00000519474 ARNTL2Q8WYA1 636 aa10.56□□□□□ -0.72
HDAC3-215ENST00000519474 TNFRSF25Q93038 417 aa10.56□□□□□ -0.72
HDAC3-215ENST00000519474 GTF3C6Q969F1 213 aa10.56□□□□□ -0.72
HDAC3-215ENST00000519474 TEKT3Q9BXF9 490 aa10.56□□□□□ -0.72
HDAC3-215ENST00000519474 SUGCTQ9HAC7 445 aa10.56□□□□□ -0.72
HDAC3-215ENST00000519474 NRBP2Q9NSY0 501 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms