RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	SYN2	Q92777	582 aa	Predicted RBP	13.63	□□□□□ -0.23
SPIDR-210	ENST00000519362	JAKMIP2	Q96AA8	810 aa		13.63	□□□□□ -0.23
SPIDR-210	ENST00000519362	PURB	Q96QR8	312 aa	Known RBP	13.63	□□□□□ -0.23
SPIDR-210	ENST00000519362	NUCKS1	Q9H1E3	243 aa	Known RBP	13.63	□□□□□ -0.23
SPIDR-210	ENST00000519362	PARVG	Q9HBI0	331 aa		13.63	□□□□□ -0.23
SPIDR-210	ENST00000519362	AGO4	Q9HCK5	861 aa	Known RBP	13.63	□□□□□ -0.23
SPIDR-210	ENST00000519362	POLD4	Q9HCU8	107 aa		13.63	□□□□□ -0.23
SPIDR-210	ENST00000519362	JADE2	Q9NQC1	790 aa		13.63	□□□□□ -0.23
SPIDR-210	ENST00000519362	SEL1L	Q9UBV2	794 aa		13.63	□□□□□ -0.23
SPIDR-210	ENST00000519362	ODF2L	Q9ULJ1	636 aa		13.63	□□□□□ -0.23
SPIDR-210	ENST00000519362	ZNF541	Q9H0D2	1346 aa		13.63	□□□□□ -0.23
SPIDR-210	ENST00000519362	ZMYM2	Q9UBW7	1377 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	SFI1	A8K8P3	1242 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	SLC16A3	O15427	465 aa	Known RBP	13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	AKAP3	O75969	853 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	FAM13A	O94988	1023 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	NR3C1	P04150	777 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	GUCY2C	P25092	1073 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	KIF11	P52732	1056 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	RPS6	P62753	249 aa	Known RBP	13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	CYP27A1	Q02318	531 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	KCNA1	Q09470	495 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	KCNH2	Q12809	1159 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	ITGB3BP	Q13352	177 aa	Predicted RBP	13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	HGSNAT	Q68CP4	663 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	CACNA2D4	Q7Z3S7	1137 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	GPR161	Q8N6U8	529 aa	Known RBP	13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	CEP112	Q8N8E3	955 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	EHBP1	Q8NDI1	1231 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	ARID3A	Q99856	593 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	DDX41	Q9UJV9	622 aa	Known RBP	13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	UBE4B	O95155	1302 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	LOXHD1	Q8IVV2	1947 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	SSU72P8	A0A1W2PR75	194 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	VWA5A	O00534	786 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	ZBED4	O75132	1171 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	PTPRA	P18433	802 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	RPL13	P26373	211 aa	Known RBP	13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	EIF4A3	P38919	411 aa	Known RBP	13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	SPA17	Q15506	151 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	DPY19L2P1	Q6NXN4	242 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	ZNF720	Q7Z2F6	126 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	MYCT1	Q8N699	235 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	ZNF280C	Q8ND82	737 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	BANK1	Q8NDB2	785 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	RABGGTA	Q92696	567 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	GOLGA1	Q92805	767 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	TAAR1	Q96RJ0	339 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	LSM14B	Q9BX40	385 aa	Known RBP	13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	HOMER2	Q9NSB8	354 aa		13.62	□□□□□ -0.23
SPIDR-210	ENST00000519362	TLR2	O60603	784 aa		13.61	□□□□□ -0.23
SPIDR-210	ENST00000519362	P4HB	P07237	508 aa	Known RBP	13.61	□□□□□ -0.23
SPIDR-210	ENST00000519362	NMT1	P30419	496 aa	Known RBP	13.61	□□□□□ -0.23
SPIDR-210	ENST00000519362	CLCN6	P51797	869 aa		13.61	□□□□□ -0.23
SPIDR-210	ENST00000519362	CHMP4BP1	P59074	171 aa		13.61	□□□□□ -0.23
SPIDR-210	ENST00000519362	R3HDM1	Q15032	1099 aa	Known RBP	13.61	□□□□□ -0.23
SPIDR-210	ENST00000519362	PGM5	Q15124	567 aa		13.61	□□□□□ -0.23
SPIDR-210	ENST00000519362	WHAMMP3	Q1A5X7	153 aa		13.61	□□□□□ -0.23
SPIDR-210	ENST00000519362	ANGEL2	Q5VTE6	544 aa	Known RBP	13.61	□□□□□ -0.23
SPIDR-210	ENST00000519362	TRAPPC11	Q7Z392	1133 aa		13.61	□□□□□ -0.23
SPIDR-210	ENST00000519362	MIER3	Q7Z3K6	550 aa		13.61	□□□□□ -0.23
SPIDR-210	ENST00000519362	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.61	□□□□□ -0.23
SPIDR-210	ENST00000519362	C12orf42	Q96LP6	360 aa		13.61	□□□□□ -0.23
SPIDR-210	ENST00000519362	TRERF1	Q96PN7	1200 aa		13.61	□□□□□ -0.23
SPIDR-210	ENST00000519362	TSGA10	Q9BZW7	698 aa		13.61	□□□□□ -0.23
SPIDR-210	ENST00000519362	GAN	Q9H2C0	597 aa		13.61	□□□□□ -0.23
SPIDR-210	ENST00000519362	AS3MT	Q9HBK9	375 aa		13.61	□□□□□ -0.23
SPIDR-210	ENST00000519362	METTL14	Q9HCE5	456 aa	Known RBP	13.61	□□□□□ -0.23
SPIDR-210	ENST00000519362	ZNF446	Q9NWS9	450 aa		13.61	□□□□□ -0.23
SPIDR-210	ENST00000519362	PCDHA13	Q9Y5I0	950 aa		13.61	□□□□□ -0.23
SPIDR-210	ENST00000519362	RLF	Q13129	1914 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	DDX39A	O00148	427 aa	Known RBP	13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	AFP	P02771	609 aa	Known RBP	13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	ZSCAN20	P17040	1043 aa	Predicted RBP	13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	KIF5A	Q12840	1032 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	MAPK7	Q13164	816 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	MTMR1	Q13613	665 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	PAPD7	Q5XG87	772 aa	Known RBP	13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	REPS2	Q8NFH8	660 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	ATG4C	Q96DT6	458 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	BORCS6	Q96GS4	357 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	WNK4	Q96J92	1243 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	WRNIP1	Q96S55	665 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	CRACR2A	Q9BSW2	395 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	STRA6	Q9BX79	667 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	IFIH1	Q9BYX4	1025 aa	Known RBP	13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	ZSWIM4	Q9H7M6	989 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	NLRC4	Q9NPP4	1024 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	PLCB1	Q9NQ66	1216 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	MYO6	Q9UM54	1294 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	ADAMTS5	Q9UNA0	930 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	DUSP10	Q9Y6W6	482 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	RBAK-RBAKDN	I3L0D1	243 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	AKR1B10	O60218	316 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	PPP1R37	O75864	691 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	LYPLA2	O95372	231 aa		13.6	□□□□□ -0.23
SPIDR-210	ENST00000519362	XRCC5	P13010	732 aa	Known RBP	13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms