RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 OXSMQ9NWU1 459 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 ADAM30Q9UKF2 790 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 FBXL21Q9UKT6 434 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 PNMA8BQ9ULN7 279 aaPredicted RBP8.49□□□□□ -1.05
CLK4-202ENST00000519132 TPX2Q9ULW0 747 aaKnown RBP8.49□□□□□ -1.05
CLK4-202ENST00000519132 RGPD5Q99666 1765 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 CNTNAP4Q9C0A0 1308 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 SLC35F4A4IF30 521 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 NEURL1BA8MQ27 555 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 EPB41L2O43491 1005 aaKnown RBP8.49□□□□□ -1.05
CLK4-202ENST00000519132 GCP02774 474 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 TNFAIP3P21580 790 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 PTX3P26022 381 aaPredicted RBP8.49□□□□□ -1.05
CLK4-202ENST00000519132 GPR3P46089 330 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 GEMIN4P57678 1058 aaKnown RBP8.49□□□□□ -1.05
CLK4-202ENST00000519132 LMBR1LQ6UX01 489 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 CCDC149Q6ZUS6 474 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 MRPL41Q8IXM3 137 aaKnown RBP8.49□□□□□ -1.05
CLK4-202ENST00000519132 PPIL6Q8IXY8 311 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 SLC5A5Q92911 643 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 BORCS6Q96GS4 357 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 MENTQ9BUN1 341 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 PCDHA11Q9Y5I1 949 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 CPDO75976 1380 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 TMPRSS2O15393 492 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 IFNGR1P15260 489 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 CHKAP35790 457 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 SWSAP1Q6NVH7 229 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 OVCH2Q7RTZ1 564 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 UBASH3BQ8TF42 649 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 DDX17Q92841 729 aaKnown RBP8.49□□□□□ -1.05
CLK4-202ENST00000519132 GBP3Q9H0R5 595 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 GIT1Q9Y2X7 761 aa8.49□□□□□ -1.05
CLK4-202ENST00000519132 ANO9A1A5B4 782 aa8.48□□□□□ -1.05
CLK4-202ENST00000519132 FLT3P36888 993 aa8.48□□□□□ -1.05
CLK4-202ENST00000519132 ARHGEF25Q86VW2 580 aa8.48□□□□□ -1.05
CLK4-202ENST00000519132 CDAN1Q8IWY9 1227 aa8.48□□□□□ -1.05
CLK4-202ENST00000519132 C7orf61Q8IZ16 206 aa8.48□□□□□ -1.05
CLK4-202ENST00000519132 CYB5D2Q8WUJ1 264 aa8.48□□□□□ -1.05
CLK4-202ENST00000519132 TNIP3Q96KP6 325 aa8.48□□□□□ -1.05
CLK4-202ENST00000519132 PNNQ9H307 717 aaKnown RBP8.48□□□□□ -1.05
CLK4-202ENST00000519132 PRDM6Q9NQX0 595 aa8.48□□□□□ -1.05
CLK4-202ENST00000519132 AP4E1Q9UPM8 1137 aa8.48□□□□□ -1.05
CLK4-202ENST00000519132 LMO7Q8WWI1 1683 aa8.48□□□□□ -1.05
CLK4-202ENST00000519132 RHOBTB3O94955 611 aa8.48□□□□□ -1.05
CLK4-202ENST00000519132 SETSIPP0DME0 302 aa8.48□□□□□ -1.05
CLK4-202ENST00000519132 KPNA1P52294 538 aaPredicted RBP8.48□□□□□ -1.05
CLK4-202ENST00000519132 NUTM2GQ5VZR2 741 aa8.48□□□□□ -1.05
CLK4-202ENST00000519132 MBLAC2Q68D91 279 aa8.48□□□□□ -1.05
CLK4-202ENST00000519132 CREBRFQ8IUR6 639 aa8.48□□□□□ -1.05
CLK4-202ENST00000519132 MAP7D2Q96T17 732 aa8.48□□□□□ -1.05
CLK4-202ENST00000519132 CBLCQ9ULV8 474 aa8.48□□□□□ -1.05
CLK4-202ENST00000519132 HOXC9P31274 260 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 CDH24Q86UP0 819 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 SLC41A1Q8IVJ1 513 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 FRS2Q8WU20 508 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 IP6K1Q92551 441 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 KIAA1191Q96A73 305 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 PRDM14Q9GZV8 571 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 PDLIM7Q9NR12 457 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 CCM2LQ9NUG4 571 aaPredicted RBP8.47□□□□□ -1.05
CLK4-202ENST00000519132 RTEL1Q9NZ71 1219 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 KDRP35968 1356 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 KRBA1A5PL33 1030 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 RBP3P10745 1247 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 RRM1P23921 792 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 IL6STP40189 918 aaPredicted RBP8.47□□□□□ -1.05
CLK4-202ENST00000519132 GTF2H3Q13889 308 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 RRP12Q5JTH9 1297 aaKnown RBP8.47□□□□□ -1.05
CLK4-202ENST00000519132 FANCD2OSQ96PS1 177 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 KRT82Q9NSB4 513 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 RGPD2P0DJD1 1756 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 U2AF1L5P0DN76 240 aaPredicted RBP8.47□□□□□ -1.05
CLK4-202ENST00000519132 AMPHP49418 695 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 U2AF1Q01081 240 aaKnown RBP eCLIP8.47□□□□□ -1.05
CLK4-202ENST00000519132 EIF4A2Q14240 407 aaKnown RBP8.47□□□□□ -1.05
CLK4-202ENST00000519132 IGF2-ASQ6U949 168 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 DDX53Q86TM3 631 aaKnown RBP8.47□□□□□ -1.05
CLK4-202ENST00000519132 HID1Q8IV36 788 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 TRIM22Q8IYM9 498 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 LRRC59Q96AG4 307 aaKnown RBP8.47□□□□□ -1.05
CLK4-202ENST00000519132 PLEKHF1Q96S99 279 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 NMRK2Q9NPI5 230 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 ZKSCAN5Q9Y2L8 839 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 PTPN22Q9Y2R2 807 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 NCAPD2Q15021 1401 aa8.47□□□□□ -1.05
CLK4-202ENST00000519132 FAM187AA6NFU0 413 aa8.46□□□□□ -1.05
CLK4-202ENST00000519132 ST8SIA5O15466 376 aa8.46□□□□□ -1.05
CLK4-202ENST00000519132 ALBP02768 609 aa8.46□□□□□ -1.05
CLK4-202ENST00000519132 TPM2P07951 284 aa8.46□□□□□ -1.05
CLK4-202ENST00000519132 CRTC3Q6UUV7 619 aa8.46□□□□□ -1.05
CLK4-202ENST00000519132 MAMDC2Q7Z304 686 aaPredicted RBP8.46□□□□□ -1.05
CLK4-202ENST00000519132 ISL2Q96A47 359 aa8.46□□□□□ -1.05
CLK4-202ENST00000519132 SGCZQ96LD1 299 aa8.46□□□□□ -1.05
CLK4-202ENST00000519132 NT5C1BQ96P26 610 aa8.46□□□□□ -1.05
CLK4-202ENST00000519132 DLG5Q8TDM6 1919 aa8.46□□□□□ -1.05
CLK4-202ENST00000519132 HMGB1P1B2RPK0 211 aaPredicted RBP8.46□□□□□ -1.06
CLK4-202ENST00000519132 K7ESF4 209 aa8.46□□□□□ -1.06
CLK4-202ENST00000519132 KPNA5O15131 536 aa8.46□□□□□ -1.06
CLK4-202ENST00000519132 WISP1O95388 367 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms