RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 LRRC8DQ7L1W4 858 aa24.74■■□□□ 1.55
VEGFA-217ENST00000518538 TTC12Q9H892 705 aaPredicted RBP24.74■■□□□ 1.55
VEGFA-217ENST00000518538 COL1A2P08123 1366 aa24.74■■□□□ 1.55
VEGFA-217ENST00000518538 TRIP12Q14669 1992 aaPredicted RBP24.74■■□□□ 1.55
VEGFA-217ENST00000518538 PARNO95453 639 aaKnown RBP24.73■■□□□ 1.55
VEGFA-217ENST00000518538 OATP04181 439 aa24.73■■□□□ 1.55
VEGFA-217ENST00000518538 THPOP40225 353 aa24.73■■□□□ 1.55
VEGFA-217ENST00000518538 TXKP42681 527 aa24.73■■□□□ 1.55
VEGFA-217ENST00000518538 PRKCEQ02156 737 aa24.73■■□□□ 1.55
VEGFA-217ENST00000518538 NBR1Q14596 966 aa24.73■■□□□ 1.55
VEGFA-217ENST00000518538 RILPL1Q5EBL4 403 aa24.73■■□□□ 1.55
VEGFA-217ENST00000518538 ZNF484Q5JVG2 852 aa24.73■■□□□ 1.55
VEGFA-217ENST00000518538 HABP4Q5JVS0 413 aaKnown RBP24.73■■□□□ 1.55
VEGFA-217ENST00000518538 RPUSD2Q8IZ73 545 aaKnown RBP24.73■■□□□ 1.55
VEGFA-217ENST00000518538 OR52Z1P0C646 297 aa24.72■■□□□ 1.55
VEGFA-217ENST00000518538 PSMC5P62195 406 aa24.72■■□□□ 1.55
VEGFA-217ENST00000518538 EPHA7Q15375 998 aa24.72■■□□□ 1.55
VEGFA-217ENST00000518538 ZNF618Q5T7W0 954 aa24.72■■□□□ 1.55
VEGFA-217ENST00000518538 NCAPH2Q6IBW4 605 aa24.72■■□□□ 1.55
VEGFA-217ENST00000518538 RUFY4Q6ZNE9 571 aa24.72■■□□□ 1.55
VEGFA-217ENST00000518538 C16orf59Q7L2K0 433 aa24.72■■□□□ 1.55
VEGFA-217ENST00000518538 RPAINQ86UA6 219 aa24.72■■□□□ 1.55
VEGFA-217ENST00000518538 TRAPPC12Q8WVT3 735 aa24.72■■□□□ 1.55
VEGFA-217ENST00000518538 NRBP2Q9NSY0 501 aa24.72■■□□□ 1.55
VEGFA-217ENST00000518538 CEP131Q9UPN4 1083 aa24.72■■□□□ 1.55
VEGFA-217ENST00000518538 KAT6AQ92794 2004 aa24.71■■□□□ 1.55
VEGFA-217ENST00000518538 MYH9P35579 1960 aaKnown RBP24.71■■□□□ 1.55
VEGFA-217ENST00000518538 VPS37CA5D8V6 355 aaPredicted RBP24.71■■□□□ 1.55
VEGFA-217ENST00000518538 ZBTB42B2RXF5 422 aa24.71■■□□□ 1.55
VEGFA-217ENST00000518538 PFKMP08237 780 aa24.71■■□□□ 1.55
VEGFA-217ENST00000518538 ACRP10323 421 aa24.71■■□□□ 1.55
VEGFA-217ENST00000518538 SYT1P21579 422 aa24.71■■□□□ 1.55
VEGFA-217ENST00000518538 SHHQ15465 462 aa24.71■■□□□ 1.55
VEGFA-217ENST00000518538 C9orf50Q5SZB4 431 aa24.71■■□□□ 1.55
VEGFA-217ENST00000518538 PSRC1Q6PGN9 363 aaPredicted RBP24.71■■□□□ 1.55
VEGFA-217ENST00000518538 TRAF7Q6Q0C0 670 aa24.71■■□□□ 1.55
VEGFA-217ENST00000518538 MTHFD1LQ6UB35 978 aa24.71■■□□□ 1.55
VEGFA-217ENST00000518538 TRMT1LQ7Z2T5 733 aaKnown RBP24.71■■□□□ 1.55
VEGFA-217ENST00000518538 BANK1Q8NDB2 785 aa24.71■■□□□ 1.55
VEGFA-217ENST00000518538 PCDHB6Q9Y5E3 794 aa24.71■■□□□ 1.55
VEGFA-217ENST00000518538 PCDHA2Q9Y5H9 948 aa24.71■■□□□ 1.55
VEGFA-217ENST00000518538 WDR81Q562E7 1941 aa24.71■■□□□ 1.55
VEGFA-217ENST00000518538 DKC1O60832 514 aaKnown RBP eCLIP24.7■■□□□ 1.54
VEGFA-217ENST00000518538 RPLP2P05387 115 aaKnown RBP24.7■■□□□ 1.54
VEGFA-217ENST00000518538 P4HBP07237 508 aaKnown RBP24.7■■□□□ 1.54
VEGFA-217ENST00000518538 HSP90AA1P07900 732 aaKnown RBP24.7■■□□□ 1.54
VEGFA-217ENST00000518538 QARSP47897 775 aaKnown RBP24.7■■□□□ 1.54
VEGFA-217ENST00000518538 TMEM240Q5SV17 173 aa24.7■■□□□ 1.54
VEGFA-217ENST00000518538 BRAPQ7Z569 592 aa24.7■■□□□ 1.54
VEGFA-217ENST00000518538 RSPH3Q86UC2 560 aa24.7■■□□□ 1.54
VEGFA-217ENST00000518538 VWCEQ96DN2 955 aa24.7■■□□□ 1.54
VEGFA-217ENST00000518538 ZBTB10Q96DT7 871 aa24.7■■□□□ 1.54
VEGFA-217ENST00000518538 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.7■■□□□ 1.542e-13■■■□□ 15.2
VEGFA-217ENST00000518538 RSPH10B2B2RC85 870 aa24.69■■□□□ 1.54
VEGFA-217ENST00000518538 RSPH10BP0C881 870 aa24.69■■□□□ 1.54
VEGFA-217ENST00000518538 KLRC1P26715 233 aa24.69■■□□□ 1.54
VEGFA-217ENST00000518538 XKR3Q5GH77 459 aa24.69■■□□□ 1.54
VEGFA-217ENST00000518538 ZNF365Q70YC5 407 aa24.69■■□□□ 1.54
VEGFA-217ENST00000518538 DEFB128Q7Z7B8 93 aa24.69■■□□□ 1.54
VEGFA-217ENST00000518538 C4orf32Q8N8J7 132 aa24.69■■□□□ 1.54
VEGFA-217ENST00000518538 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.69■■□□□ 1.54
VEGFA-217ENST00000518538 SMIM35A0A1B0GVV1 85 aa24.68■■□□□ 1.54
VEGFA-217ENST00000518538 STBD1O95210 358 aa24.68■■□□□ 1.54
VEGFA-217ENST00000518538 GPNMBQ14956 572 aa24.68■■□□□ 1.54
VEGFA-217ENST00000518538 FAM26DQ5JW98 314 aa24.68■■□□□ 1.54
VEGFA-217ENST00000518538 DNAJB3Q8WWF6 145 aa24.68■■□□□ 1.54
VEGFA-217ENST00000518538 RNPC3Q96LT9 517 aaKnown RBP24.68■■□□□ 1.54
VEGFA-217ENST00000518538 NIFKQ9BYG3 293 aaKnown RBP24.68■■□□□ 1.54
VEGFA-217ENST00000518538 POTEMA6NI47 508 aa24.67■■□□□ 1.54
VEGFA-217ENST00000518538 LAD1O00515 517 aa24.67■■□□□ 1.54
VEGFA-217ENST00000518538 NBNO60934 754 aa24.67■■□□□ 1.54
VEGFA-217ENST00000518538 C22orf31O95567 290 aa24.67■■□□□ 1.54
VEGFA-217ENST00000518538 FGBP02675 491 aa24.67■■□□□ 1.54
VEGFA-217ENST00000518538 CTSHP09668 335 aa24.67■■□□□ 1.54
VEGFA-217ENST00000518538 PTGDRQ13258 359 aa24.67■■□□□ 1.54
VEGFA-217ENST00000518538 NEK9Q8TD19 979 aa24.67■■□□□ 1.54
VEGFA-217ENST00000518538 DYDC2Q96IM9 177 aa24.67■■□□□ 1.54
VEGFA-217ENST00000518538 EIF2AK1Q9BQI3 630 aaKnown RBP24.67■■□□□ 1.54
VEGFA-217ENST00000518538 LXNQ9BS40 222 aa24.67■■□□□ 1.54
VEGFA-217ENST00000518538 RGL1Q9NZL6 768 aa24.67■■□□□ 1.54
VEGFA-217ENST00000518538 SEPT9Q9UHD8 586 aaPredicted RBP24.67■■□□□ 1.54
VEGFA-217ENST00000518538 SCN5AQ14524 2016 aa24.66■■□□□ 1.54
VEGFA-217ENST00000518538 MAGEB2O15479 319 aa24.66■■□□□ 1.54
VEGFA-217ENST00000518538 CXCL10P02778 98 aa24.66■■□□□ 1.54
VEGFA-217ENST00000518538 TECP42680 631 aa24.66■■□□□ 1.54
VEGFA-217ENST00000518538 MBTPS1Q14703 1052 aa24.66■■□□□ 1.54
VEGFA-217ENST00000518538 TARBP2Q15633 366 aaKnown RBP24.66■■□□□ 1.54
VEGFA-217ENST00000518538 TMEM266Q2M3C6 531 aa24.66■■□□□ 1.54
VEGFA-217ENST00000518538 LRIT3Q3SXY7 679 aa24.66■■□□□ 1.54
VEGFA-217ENST00000518538 FERMT3Q86UX7 667 aa24.66■■□□□ 1.54
VEGFA-217ENST00000518538 C4orf19Q8IY42 314 aa24.66■■□□□ 1.54
VEGFA-217ENST00000518538 HERVK_113Q902F9 699 aa24.66■■□□□ 1.54
VEGFA-217ENST00000518538 FAM49AQ9H0Q0 323 aaPredicted RBP24.66■■□□□ 1.54
VEGFA-217ENST00000518538 ZSWIM4Q9H7M6 989 aa24.66■■□□□ 1.54
VEGFA-217ENST00000518538 WRAP73Q9P2S5 460 aaPredicted RBP24.66■■□□□ 1.54
VEGFA-217ENST00000518538 DDX11L8A8MPP1 907 aa24.65■■□□□ 1.54
VEGFA-217ENST00000518538 STX6O43752 255 aa24.65■■□□□ 1.54
VEGFA-217ENST00000518538 FXR2P51116 673 aaKnown RBP eCLIP24.65■■□□□ 1.54
VEGFA-217ENST00000518538 CYP4A11Q02928 519 aa24.65■■□□□ 1.54
VEGFA-217ENST00000518538 HSD17B14Q9BPX1 270 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms