RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 DOCK3Q8IZD9 2030 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 DNAJC25-GNG10A0A024R161 153 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ASB14A6NK59 587 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 B4DLN1 442 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 GDF9O60383 454 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 CPNE3O75131 537 aaKnown RBP6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 CTDNEP1O95476 244 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 HMGCRP04035 888 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 HOXC6P09630 235 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 SMPD1P17405 629 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 CNGA1P29973 690 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 HOXA13P31271 388 aaPredicted RBP6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 CYP2C19P33261 490 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ZNF76P36508 570 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 NLRP5P59047 1200 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 SF3A1Q15459 793 aaKnown RBP6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 PKN1Q16512 942 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ARHGEF16Q5VV41 709 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 USP17L6PQ6QN14 398 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 SLC30A10Q6XR72 485 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 FAM133AQ8N9E0 248 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 CCDC12Q8WUD4 166 aaPredicted RBP6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 TRIB2Q92519 343 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 WASF1Q92558 559 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 TMX3Q96JJ7 454 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 MAML3Q96JK9 1138 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 TAAR1Q96RJ0 339 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 RMDN3Q96TC7 470 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 MPHOSPH6Q99547 160 aaKnown RBP6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 TINF2Q9BSI4 451 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 C6orf50Q9HD87 102 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 BARHL2Q9NY43 387 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ZDHHC3Q9NYG2 299 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 MAP3K20Q9NYL2 800 aaKnown RBP6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 FLRT1Q9NZU1 646 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 VPS54Q9P1Q0 977 aa6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 DMGDHQ9UI17 866 aaKnown RBP6.64□□□□□ -1.35
SCARNA6.1-201ENST00000516989 PCNTO95613 3336 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 CCDC85CA6NKD9 419 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 SPDYE3A6NKU9 549 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 hCG_1984214I3L0E3 225 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 STXBP3O00186 592 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 JAK2O60674 1132 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 MYCLP12524 364 aaPredicted RBP6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 XBP1P17861 261 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 EIF2AK2P19525 551 aaKnown RBP6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 GNA11P29992 359 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 IDH3AP50213 366 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ADCY7P51828 1080 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 CACNB2Q08289 660 aaPredicted RBP6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ST3GAL1Q11201 340 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 NID2Q14112 1375 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 JAKMIP3Q5VZ66 844 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 OLFML2BQ68BL8 750 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ARMCX2Q7L311 632 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 EEPD1Q7L9B9 569 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 SAMD3Q8N6K7 520 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ZNF713Q8N859 430 aaPredicted RBP6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 FAM184AQ8NB25 1140 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 NSUN7Q8NE18 718 aaKnown RBP6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 CCDC148Q8NFR7 591 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 NSUN6Q8TEA1 469 aaKnown RBP6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 HSH2DQ96JZ2 352 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 AIFM3Q96NN9 605 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 LLPHQ9BRT6 129 aaKnown RBP6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ALG1Q9BT22 464 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 TGIF2Q9GZN2 237 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 MAF1Q9H063 256 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 RNF208Q9H0X6 261 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 GLT8D2Q9H1C3 349 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 POLMQ9NP87 494 aaPredicted RBP6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 RIC8AQ9NPQ8 531 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 TOR4AQ9NXH8 423 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 COL20A1Q9P218 1284 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ZHX1Q9UKY1 873 aaPredicted RBP6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 CNPY2Q9Y2B0 182 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 USP20Q9Y2K6 914 aa6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 DDX49Q9Y6V7 483 aaKnown RBP6.63□□□□□ -1.35
SCARNA6.1-201ENST00000516989 SMCHD1A6NHR9 2005 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 COL11A1P12107 1806 aaPredicted RBP6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 RPTORQ8N122 1335 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 SPATA31C2B4DYI2 1134 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 TNFRSF10AO00220 468 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 MEIS2O14770 477 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 SPINT1O43278 529 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 SNAI1O95863 264 aaPredicted RBP6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 CTSHP09668 335 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 FDPSP14324 419 aaKnown RBP6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 CCND3P30281 292 aaPredicted RBP6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 CTSOP43234 321 aaPredicted RBP6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ALDH5A1P51649 535 aaPredicted RBP6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 HSD17B4P51659 736 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 HMGN5P82970 282 aaKnown RBP6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 POU4F2Q12837 409 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 ACVR2BQ13705 512 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 TRIM29Q14134 588 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 STXBP2Q15833 593 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 UBE2SQ16763 222 aa6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.62□□□□□ -1.35
SCARNA6.1-201ENST00000516989 IER5Q5VY09 327 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms