RNA–Protein interactions for RNA: ENST00000516329.1

SNORA40.12-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 111 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.12-201ENST00000516329 IRF9Q00978 393 aa4.79□□□□□ -1.64
SNORA40.12-201ENST00000516329 EFEMP1Q12805 493 aa4.79□□□□□ -1.64
SNORA40.12-201ENST00000516329 ZNF827Q17R98 1081 aa4.79□□□□□ -1.64
SNORA40.12-201ENST00000516329 C21orf62-AS1Q17RA5 79 aa4.79□□□□□ -1.64
SNORA40.12-201ENST00000516329 WDR72Q3MJ13 1102 aa4.79□□□□□ -1.64
SNORA40.12-201ENST00000516329 LRSAM1Q6UWE0 723 aa4.79□□□□□ -1.64
SNORA40.12-201ENST00000516329 ARHGEF18Q6ZSZ5 1173 aa4.79□□□□□ -1.64
SNORA40.12-201ENST00000516329 DDX53Q86TM3 631 aaKnown RBP4.79□□□□□ -1.64
SNORA40.12-201ENST00000516329 HIPK4Q8NE63 616 aa4.79□□□□□ -1.64
SNORA40.12-201ENST00000516329 ASB15Q8WXK1 588 aa4.79□□□□□ -1.64
SNORA40.12-201ENST00000516329 ERCC4Q92889 916 aaPredicted RBP4.79□□□□□ -1.64
SNORA40.12-201ENST00000516329 PTPN18Q99952 460 aa4.79□□□□□ -1.64
SNORA40.12-201ENST00000516329 KCNH7Q9NS40 1196 aa4.79□□□□□ -1.64
SNORA40.12-201ENST00000516329 TMEM260Q9NX78 707 aa4.79□□□□□ -1.64
SNORA40.12-201ENST00000516329 SAMD15Q9P1V8 674 aa4.79□□□□□ -1.64
SNORA40.12-201ENST00000516329 MPIG6BO95866 241 aa4.78□□□□□ -1.64
SNORA40.12-201ENST00000516329 RRADP55042 308 aa4.78□□□□□ -1.64
SNORA40.12-201ENST00000516329 KRTAP10-2P60368 255 aa4.78□□□□□ -1.64
SNORA40.12-201ENST00000516329 SURF1Q15526 300 aa4.78□□□□□ -1.64
SNORA40.12-201ENST00000516329 SPATS1Q496A3 300 aa4.78□□□□□ -1.64
SNORA40.12-201ENST00000516329 FNDC3BQ53EP0 1204 aaKnown RBP4.78□□□□□ -1.64
SNORA40.12-201ENST00000516329 ZCCHC8Q6NZY4 707 aaKnown RBP4.78□□□□□ -1.64
SNORA40.12-201ENST00000516329 GLB1LQ6UWU2 654 aa4.78□□□□□ -1.64
SNORA40.12-201ENST00000516329 DPP8Q6V1X1 898 aaPredicted RBP4.78□□□□□ -1.64
SNORA40.12-201ENST00000516329 IFNL2Q8IZJ0 200 aa4.78□□□□□ -1.64
SNORA40.12-201ENST00000516329 RNPC3Q96LT9 517 aaKnown RBP4.78□□□□□ -1.64
SNORA40.12-201ENST00000516329 GBP4Q96PP9 640 aa4.78□□□□□ -1.64
SNORA40.12-201ENST00000516329 RBM15Q96T37 977 aaKnown RBP eCLIP4.78□□□□□ -1.64
SNORA40.12-201ENST00000516329 GALNT8Q9NY28 637 aa4.78□□□□□ -1.64
SNORA40.12-201ENST00000516329 PPP4R1LQ9P1A2 415 aa4.78□□□□□ -1.64
SNORA40.12-201ENST00000516329 B3GALT1Q9Y5Z6 326 aa4.78□□□□□ -1.64
SNORA40.12-201ENST00000516329 PRAMEF22A3QJZ6 481 aa4.77□□□□□ -1.65
SNORA40.12-201ENST00000516329 NPEPPSL1A6NEC2 478 aa4.77□□□□□ -1.65
SNORA40.12-201ENST00000516329 RASSF10A6NK89 507 aa4.77□□□□□ -1.65
SNORA40.12-201ENST00000516329 NPTXRO95502 500 aa4.77□□□□□ -1.65
SNORA40.12-201ENST00000516329 ASLP04424 464 aa4.77□□□□□ -1.65
SNORA40.12-201ENST00000516329 SDSP20132 328 aa4.77□□□□□ -1.65
SNORA40.12-201ENST00000516329 KCNQ1P51787 676 aa4.77□□□□□ -1.65
SNORA40.12-201ENST00000516329 PPP2CBP62714 309 aa4.77□□□□□ -1.65
SNORA40.12-201ENST00000516329 PPP2CAP67775 309 aa4.77□□□□□ -1.65
SNORA40.12-201ENST00000516329 PABPC4Q13310 644 aaKnown RBP eCLIP4.77□□□□□ -1.65
SNORA40.12-201ENST00000516329 USP10Q14694 798 aaKnown RBP4.77□□□□□ -1.65
SNORA40.12-201ENST00000516329 PIK3R6Q5UE93 754 aa4.77□□□□□ -1.65
SNORA40.12-201ENST00000516329 WDR48Q8TAF3 677 aa4.77□□□□□ -1.65
SNORA40.12-201ENST00000516329 DLG3Q92796 817 aa4.77□□□□□ -1.65
SNORA40.12-201ENST00000516329 AJUBAQ96IF1 538 aa4.77□□□□□ -1.65
SNORA40.12-201ENST00000516329 C8orf49Q96NF6 230 aa4.77□□□□□ -1.65
SNORA40.12-201ENST00000516329 BOCQ9BWV1 1114 aa4.77□□□□□ -1.65
SNORA40.12-201ENST00000516329 AMNQ9BXJ7 453 aa4.77□□□□□ -1.65
SNORA40.12-201ENST00000516329 SMPD4Q9NXE4 827 aa4.77□□□□□ -1.65
SNORA40.12-201ENST00000516329 ST6GALNAC2Q9UJ37 374 aa4.77□□□□□ -1.65
SNORA40.12-201ENST00000516329 CDC42EP3Q9UKI2 254 aa4.77□□□□□ -1.65
SNORA40.12-201ENST00000516329 B4E1Z4 1266 aa4.76□□□□□ -1.65
SNORA40.12-201ENST00000516329 CNOT4O95628 575 aaKnown RBP4.76□□□□□ -1.65
SNORA40.12-201ENST00000516329 ADRB1P08588 477 aa4.76□□□□□ -1.65
SNORA40.12-201ENST00000516329 JMJD7P0C870 316 aa4.76□□□□□ -1.65
SNORA40.12-201ENST00000516329 POLD1P28340 1107 aa4.76□□□□□ -1.65
SNORA40.12-201ENST00000516329 ECE1P42892 770 aa4.76□□□□□ -1.65
SNORA40.12-201ENST00000516329 EPHB4P54760 987 aa4.76□□□□□ -1.65
SNORA40.12-201ENST00000516329 NFKB2Q00653 900 aa4.76□□□□□ -1.65
SNORA40.12-201ENST00000516329 CD83Q01151 205 aa4.76□□□□□ -1.65
SNORA40.12-201ENST00000516329 TOP3AQ13472 1001 aaPredicted RBP4.76□□□□□ -1.65
SNORA40.12-201ENST00000516329 ZNF568Q3ZCX4 644 aa4.76□□□□□ -1.65
SNORA40.12-201ENST00000516329 CATSPEREQ5SY80 951 aa4.76□□□□□ -1.65
SNORA40.12-201ENST00000516329 OTOP2Q7RTS6 562 aa4.76□□□□□ -1.65
SNORA40.12-201ENST00000516329 REXO1L1PQ8IX06 675 aa4.76□□□□□ -1.65
SNORA40.12-201ENST00000516329 CHST14Q8NCH0 376 aa4.76□□□□□ -1.65
SNORA40.12-201ENST00000516329 LRRC37BQ96QE4 947 aa4.76□□□□□ -1.65
SNORA40.12-201ENST00000516329 KATNBL1Q9H079 304 aa4.76□□□□□ -1.65
SNORA40.12-201ENST00000516329 KIAA1683Q9H0B3 1180 aa4.76□□□□□ -1.65
SNORA40.12-201ENST00000516329 FANCLQ9NW38 375 aa4.76□□□□□ -1.65
SNORA40.12-201ENST00000516329 CNOT11Q9UKZ1 510 aaKnown RBP4.76□□□□□ -1.65
SNORA40.12-201ENST00000516329 CD2APQ9Y5K6 639 aa4.76□□□□□ -1.65
SNORA40.12-201ENST00000516329 PTPDC1A2A3K4 754 aa4.75□□□□□ -1.65
SNORA40.12-201ENST00000516329 HMGCRP04035 888 aa4.75□□□□□ -1.65
SNORA40.12-201ENST00000516329 ZBTB48P10074 688 aaPredicted RBP4.75□□□□□ -1.65
SNORA40.12-201ENST00000516329 MAGEA10P43363 369 aaPredicted RBP4.75□□□□□ -1.65
SNORA40.12-201ENST00000516329 MECP2P51608 486 aaKnown RBP4.75□□□□□ -1.65
SNORA40.12-201ENST00000516329 KIF11P52732 1056 aa4.75□□□□□ -1.65
SNORA40.12-201ENST00000516329 TKFCQ3LXA3 575 aa4.75□□□□□ -1.65
SNORA40.12-201ENST00000516329 SLFN13Q68D06 897 aa4.75□□□□□ -1.65
SNORA40.12-201ENST00000516329 CIR1Q86X95 450 aaPredicted RBP4.75□□□□□ -1.65
SNORA40.12-201ENST00000516329 HOMER1Q86YM7 354 aa4.75□□□□□ -1.65
SNORA40.12-201ENST00000516329 CHST13Q8NET6 341 aa4.75□□□□□ -1.65
SNORA40.12-201ENST00000516329 GNRHR2Q96P88 292 aa4.75□□□□□ -1.65
SNORA40.12-201ENST00000516329 SSBP3Q9BWW4 388 aaPredicted RBP4.75□□□□□ -1.65
SNORA40.12-201ENST00000516329 BTBD2Q9BX70 525 aa4.75□□□□□ -1.65
SNORA40.12-201ENST00000516329 CARD11Q9BXL7 1154 aa4.75□□□□□ -1.65
SNORA40.12-201ENST00000516329 KRTAP9-3Q9BYQ3 159 aa4.75□□□□□ -1.65
SNORA40.12-201ENST00000516329 MEGF9Q9H1U4 602 aa4.75□□□□□ -1.65
SNORA40.12-201ENST00000516329 OR10A5Q9H207 317 aa4.75□□□□□ -1.65
SNORA40.12-201ENST00000516329 PCIF1Q9H4Z3 704 aa4.75□□□□□ -1.65
SNORA40.12-201ENST00000516329 CABP5Q9NP86 173 aa4.75□□□□□ -1.65
SNORA40.12-201ENST00000516329 ASB1Q9Y576 335 aa4.75□□□□□ -1.65
SNORA40.12-201ENST00000516329 MRPL42Q9Y6G3 142 aaKnown RBP4.75□□□□□ -1.65
SNORA40.12-201ENST00000516329 SLC4A7Q9Y6M7 1214 aa4.75□□□□□ -1.65
SNORA40.12-201ENST00000516329 TRAF5O00463 557 aa4.74□□□□□ -1.65
SNORA40.12-201ENST00000516329 DVL2O14641 736 aa4.74□□□□□ -1.65
SNORA40.12-201ENST00000516329 GPR42O15529 346 aa4.74□□□□□ -1.65
SNORA40.12-201ENST00000516329 CUTAO60888 179 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 1292.6 ms