RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 ZKSCAN8Q15776 578 aaPredicted RBP11.85□□□□□ -0.51
TRIM41-209ENST00000515834 MAPK6Q16659 721 aa11.85□□□□□ -0.51
TRIM41-209ENST00000515834 SLFN12LQ6IEE8 588 aa11.85□□□□□ -0.51
TRIM41-209ENST00000515834 FOXP4Q8IVH2 680 aaPredicted RBP11.85□□□□□ -0.51
TRIM41-209ENST00000515834 PPP2R3CQ969Q6 453 aa11.85□□□□□ -0.51
TRIM41-209ENST00000515834 FAF2Q96CS3 445 aa11.85□□□□□ -0.51
TRIM41-209ENST00000515834 EMILIN3Q9NT22 766 aa11.85□□□□□ -0.51
TRIM41-209ENST00000515834 ZNF335Q9H4Z2 1342 aaPredicted RBP11.84□□□□□ -0.51
TRIM41-209ENST00000515834 H3BRJ5 948 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 ASMTLO95671 621 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 TMEM179Q6ZVK1 233 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 TRIM59Q8IWR1 403 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 GIMAP8Q8ND71 665 aaPredicted RBP11.84□□□□□ -0.51
TRIM41-209ENST00000515834 DHX38Q92620 1227 aaKnown RBP11.84□□□□□ -0.51
TRIM41-209ENST00000515834 EPN1Q9Y6I3 576 aaPredicted RBP11.84□□□□□ -0.51
TRIM41-209ENST00000515834 NUP153P49790 1475 aaKnown RBP11.84□□□□□ -0.51
TRIM41-209ENST00000515834 ANP32DO95626 131 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 ECEL1O95672 775 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 MT-ND3P03897 115 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 PLTPP55058 493 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 SPP2Q13103 211 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 GLE1Q53GS7 698 aaKnown RBP11.84□□□□□ -0.51
TRIM41-209ENST00000515834 TTC23LQ6PF05 361 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 NUDT18Q6ZVK8 323 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 ELP3Q9H9T3 547 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 CXCR5P32302 372 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 VEPH1Q14D04 833 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 BBS9Q3SYG4 887 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 DNAJC17Q9NVM6 304 aaKnown RBP11.84□□□□□ -0.51
TRIM41-209ENST00000515834 CFAP69A5D8W1 941 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 E5RI56 91 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 TCP1P17987 556 aaKnown RBP11.84□□□□□ -0.51
TRIM41-209ENST00000515834 GPC3P51654 580 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 GPSM2P81274 684 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 LBRQ14739 615 aaKnown RBP11.84□□□□□ -0.51
TRIM41-209ENST00000515834 KCTD16Q68DU8 428 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 PIGBQ92521 554 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 CCDC124Q96CT7 223 aaKnown RBP11.84□□□□□ -0.51
TRIM41-209ENST00000515834 AK8Q96MA6 479 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 MAGEF1Q9HAY2 307 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 ANLNQ9NQW6 1124 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 ZNF302Q9NR11 478 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 FAN1Q9Y2M0 1017 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 UGGT2Q9NYU1 1516 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 CASP14P31944 242 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 IFNA8P32881 189 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 TNFAIP2Q03169 654 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 ZNF699Q32M78 642 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 GINM1Q9NU53 330 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 TTI1O43156 1089 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 ADORA2BP29275 332 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 BLVRAP53004 296 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 SP110Q9HB58 689 aa11.84□□□□□ -0.51
TRIM41-209ENST00000515834 GOLGA8KD6RF30 607 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 DNAJC6O75061 913 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 EEF1B2P24534 225 aaKnown RBP11.83□□□□□ -0.52
TRIM41-209ENST00000515834 SMAD1Q15797 465 aaKnown RBP11.83□□□□□ -0.52
TRIM41-209ENST00000515834 TEKT2Q9UIF3 430 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 DBNLQ9UJU6 430 aaKnown RBP11.83□□□□□ -0.52
TRIM41-209ENST00000515834 PCDHA6Q9UN73 950 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 PCDHA8Q9Y5H6 950 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 ABCC4O15439 1325 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 FTCDO95954 541 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 PLS3P13797 630 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 ANKRD20A4Q4UJ75 823 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 ANKRD20A8PQ5CZ79 823 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 ANKRD20A2Q5SQ80 823 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 ANKRD20A1Q5TYW2 823 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 NDFIP2Q9NV92 336 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 ABCC12Q96J65 1359 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 MAST1Q9Y2H9 1570 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 KIF28PB7ZC32 967 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 HSPA6P17066 643 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 JAK3P52333 1124 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 SSH3Q8TE77 659 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 RNF26Q9BY78 433 aaPredicted RBP11.83□□□□□ -0.52
TRIM41-209ENST00000515834 TM6SF1Q9BZW5 370 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 MTIF3Q9H2K0 278 aaKnown RBP11.83□□□□□ -0.52
TRIM41-209ENST00000515834 CUEDC2Q9H467 287 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 FBXO40Q9UH90 709 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 FEM1BQ9UK73 627 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 ATP8A1Q9Y2Q0 1164 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 IQCA1LA6NCM1 817 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 USP17L10C9JJH3 530 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 SERPIND1P05546 499 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 PYGLP06737 847 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 SLCO1A2P46721 670 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 R3HDM1Q15032 1099 aaKnown RBP11.83□□□□□ -0.52
TRIM41-209ENST00000515834 PDCD2Q16342 344 aaPredicted RBP11.83□□□□□ -0.52
TRIM41-209ENST00000515834 TAS2R42Q7RTR8 314 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 SCYL3Q8IZE3 742 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 PUS7LQ9H0K6 701 aaKnown RBP11.83□□□□□ -0.52
TRIM41-209ENST00000515834 FOXP1Q9H334 677 aaPredicted RBP11.83□□□□□ -0.52
TRIM41-209ENST00000515834 HEY1Q9Y5J3 304 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 NPHP4O75161 1426 aaPredicted RBP11.83□□□□□ -0.52
TRIM41-209ENST00000515834 PLCG1P19174 1290 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 NR5A1Q13285 461 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 GLYCTKQ8IVS8 523 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 OR6J1Q8NGC5 347 aa11.83□□□□□ -0.52
TRIM41-209ENST00000515834 DAAM1Q9Y4D1 1078 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms