RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 OATP04181 439 aa29.17■■■□□ 2.26
DDR1-279ENST00000515529 CKBP12277 381 aa29.17■■■□□ 2.26
DDR1-279ENST00000515529 TOB1P50616 345 aaPredicted RBP29.17■■■□□ 2.26
DDR1-279ENST00000515529 PSMC5P62195 406 aa29.17■■■□□ 2.26
DDR1-279ENST00000515529 ADAM17P78536 824 aa29.17■■■□□ 2.26
DDR1-279ENST00000515529 EPHA7Q15375 998 aa29.17■■■□□ 2.26
DDR1-279ENST00000515529 UGCGQ16739 394 aa29.17■■■□□ 2.26
DDR1-279ENST00000515529 LRRC8DQ7L1W4 858 aa29.17■■■□□ 2.26
DDR1-279ENST00000515529 BANK1Q8NDB2 785 aa29.17■■■□□ 2.26
DDR1-279ENST00000515529 PCDHB6Q9Y5E3 794 aa29.17■■■□□ 2.26
DDR1-279ENST00000515529 MYH9P35579 1960 aaKnown RBP29.16■■■□□ 2.26
DDR1-279ENST00000515529 ATP4AP20648 1035 aa29.16■■■□□ 2.26
DDR1-279ENST00000515529 RFC2P35250 354 aa29.16■■■□□ 2.26
DDR1-279ENST00000515529 RBL2Q08999 1139 aa29.16■■■□□ 2.26
DDR1-279ENST00000515529 FERMT3Q86UX7 667 aa29.16■■■□□ 2.26
DDR1-279ENST00000515529 RPUSD2Q8IZ73 545 aaKnown RBP29.16■■■□□ 2.26
DDR1-279ENST00000515529 TRAPPC12Q8WVT3 735 aa29.16■■■□□ 2.26
DDR1-279ENST00000515529 A0A1W2PPC1 479 aa29.15■■■□□ 2.26
DDR1-279ENST00000515529 MBLAC1A4D2B0 266 aaPredicted RBP29.15■■■□□ 2.26
DDR1-279ENST00000515529 CAND2O75155 1236 aa29.15■■■□□ 2.26
DDR1-279ENST00000515529 PARNO95453 639 aaKnown RBP29.15■■■□□ 2.26
DDR1-279ENST00000515529 P4HBP07237 508 aaKnown RBP29.15■■■□□ 2.26
DDR1-279ENST00000515529 IQCF3P0C7M6 154 aa29.15■■■□□ 2.26
DDR1-279ENST00000515529 QARSP47897 775 aaKnown RBP29.15■■■□□ 2.26
DDR1-279ENST00000515529 SPIRE1Q08AE8 756 aa29.15■■■□□ 2.26
DDR1-279ENST00000515529 BECN1Q14457 450 aa29.15■■■□□ 2.26
DDR1-279ENST00000515529 TDHQ8IZJ6 230 aa29.15■■■□□ 2.26
DDR1-279ENST00000515529 SPRYD3Q8NCJ5 442 aa29.15■■■□□ 2.26
DDR1-279ENST00000515529 PRO3102Q9H379 93 aa29.15■■■□□ 2.26
DDR1-279ENST00000515529 IL23AQ9NPF7 189 aa29.15■■■□□ 2.26
DDR1-279ENST00000515529 TRIP12Q14669 1992 aaPredicted RBP29.14■■■□□ 2.26
DDR1-279ENST00000515529 LAD1O00515 517 aa29.14■■■□□ 2.26
DDR1-279ENST00000515529 STX6O43752 255 aa29.14■■■□□ 2.26
DDR1-279ENST00000515529 ZNF862O60290 1169 aa29.14■■■□□ 2.26
DDR1-279ENST00000515529 RPLP2P05387 115 aaKnown RBP29.14■■■□□ 2.26
DDR1-279ENST00000515529 PTGDRQ13258 359 aa29.14■■■□□ 2.26
DDR1-279ENST00000515529 TRIM71Q2Q1W2 868 aaKnown RBP29.14■■■□□ 2.26
DDR1-279ENST00000515529 XKR3Q5GH77 459 aa29.14■■■□□ 2.26
DDR1-279ENST00000515529 MARCH8Q5T0T0 291 aa29.14■■■□□ 2.26
DDR1-279ENST00000515529 PSRC1Q6PGN9 363 aaPredicted RBP29.14■■■□□ 2.26
DDR1-279ENST00000515529 WNT8BQ93098 351 aa29.14■■■□□ 2.26
DDR1-279ENST00000515529 SEPT9Q9UHD8 586 aaPredicted RBP29.14■■■□□ 2.26
DDR1-279ENST00000515529 KLRC1P26715 233 aa29.13■■■□□ 2.25
DDR1-279ENST00000515529 TECP42680 631 aa29.13■■■□□ 2.25
DDR1-279ENST00000515529 ZNF618Q5T7W0 954 aa29.13■■■□□ 2.25
DDR1-279ENST00000515529 MTHFD1LQ6UB35 978 aa29.13■■■□□ 2.25
DDR1-279ENST00000515529 RUFY4Q6ZNE9 571 aa29.13■■■□□ 2.25
DDR1-279ENST00000515529 DEFB128Q7Z7B8 93 aa29.13■■■□□ 2.25
DDR1-279ENST00000515529 FAM49AQ9H0Q0 323 aaPredicted RBP29.13■■■□□ 2.25
DDR1-279ENST00000515529 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.13■■■□□ 2.25
DDR1-279ENST00000515529 DDX11L8A8MPP1 907 aa29.12■■■□□ 2.25
DDR1-279ENST00000515529 RSPH10B2B2RC85 870 aa29.12■■■□□ 2.25
DDR1-279ENST00000515529 PFKMP08237 780 aa29.12■■■□□ 2.25
DDR1-279ENST00000515529 CTSHP09668 335 aa29.12■■■□□ 2.25
DDR1-279ENST00000515529 RSPH10BP0C881 870 aa29.12■■■□□ 2.25
DDR1-279ENST00000515529 ACRP10323 421 aa29.12■■■□□ 2.25
DDR1-279ENST00000515529 PDIA4P13667 645 aaKnown RBP29.12■■■□□ 2.25
DDR1-279ENST00000515529 ERMNQ8TAM6 284 aa29.12■■■□□ 2.25
DDR1-279ENST00000515529 NEK9Q8TD19 979 aa29.12■■■□□ 2.25
DDR1-279ENST00000515529 DYDC2Q96IM9 177 aa29.12■■■□□ 2.25
DDR1-279ENST00000515529 EIF2AK1Q9BQI3 630 aaKnown RBP29.12■■■□□ 2.25
DDR1-279ENST00000515529 LXNQ9BS40 222 aa29.12■■■□□ 2.25
DDR1-279ENST00000515529 RAB34Q9BZG1 259 aa29.12■■■□□ 2.25
DDR1-279ENST00000515529 FTOQ9C0B1 505 aaKnown RBP eCLIP29.12■■■□□ 2.25
DDR1-279ENST00000515529 PCDHA2Q9Y5H9 948 aa29.12■■■□□ 2.25
DDR1-279ENST00000515529 POTEMA6NI47 508 aa29.11■■■□□ 2.25
DDR1-279ENST00000515529 EPHB4P54760 987 aa29.11■■■□□ 2.25
DDR1-279ENST00000515529 CYP4A11Q02928 519 aa29.11■■■□□ 2.25
DDR1-279ENST00000515529 TPH2Q8IWU9 490 aa29.11■■■□□ 2.25
DDR1-279ENST00000515529 DNAJB3Q8WWF6 145 aa29.11■■■□□ 2.25
DDR1-279ENST00000515529 ZSWIM4Q9H7M6 989 aa29.11■■■□□ 2.25
DDR1-279ENST00000515529 RGL1Q9NZL6 768 aa29.11■■■□□ 2.25
DDR1-279ENST00000515529 MTMR6Q9Y217 621 aa29.11■■■□□ 2.25
DDR1-279ENST00000515529 M0QZ92 97 aa29.1■■■□□ 2.25
DDR1-279ENST00000515529 MAGEB2O15479 319 aa29.1■■■□□ 2.25
DDR1-279ENST00000515529 CTTNQ14247 550 aaKnown RBP29.1■■■□□ 2.25
DDR1-279ENST00000515529 C4orf32Q8N8J7 132 aa29.1■■■□□ 2.25
DDR1-279ENST00000515529 ZBTB10Q96DT7 871 aa29.1■■■□□ 2.25
DDR1-279ENST00000515529 MTIF3Q9H2K0 278 aaKnown RBP29.1■■■□□ 2.25
DDR1-279ENST00000515529 SMIM35A0A1B0GVV1 85 aa29.09■■■□□ 2.25
DDR1-279ENST00000515529 FGBP02675 491 aa29.09■■■□□ 2.25
DDR1-279ENST00000515529 TBC1D8BQ0IIM8 1120 aa29.09■■■□□ 2.25
DDR1-279ENST00000515529 SHHQ15465 462 aa29.09■■■□□ 2.25
DDR1-279ENST00000515529 MTERF2Q49AM1 385 aa29.09■■■□□ 2.25
DDR1-279ENST00000515529 DTHD1Q6ZMT9 781 aa29.09■■■□□ 2.25
DDR1-279ENST00000515529 ZNF365Q70YC5 407 aa29.09■■■□□ 2.25
DDR1-279ENST00000515529 RPAINQ86UA6 219 aa29.09■■■□□ 2.25
DDR1-279ENST00000515529 METTL13Q8N6R0 699 aa29.09■■■□□ 2.25
DDR1-279ENST00000515529 RNPC3Q96LT9 517 aaKnown RBP29.09■■■□□ 2.25
DDR1-279ENST00000515529 ZSCAN16Q9H4T2 348 aaPredicted RBP29.09■■■□□ 2.25
DDR1-279ENST00000515529 ZBTB42B2RXF5 422 aa29.08■■■□□ 2.25
DDR1-279ENST00000515529 C22orf31O95567 290 aa29.08■■■□□ 2.25
DDR1-279ENST00000515529 BMP15O95972 392 aa29.08■■■□□ 2.25
DDR1-279ENST00000515529 ACTN1P12814 892 aa29.08■■■□□ 2.25
DDR1-279ENST00000515529 PRPHP41219 470 aa29.08■■■□□ 2.25
DDR1-279ENST00000515529 FXR2P51116 673 aaKnown RBP eCLIP29.08■■■□□ 2.25
DDR1-279ENST00000515529 RESTQ13127 1097 aa29.08■■■□□ 2.25
DDR1-279ENST00000515529 TMEM240Q5SV17 173 aa29.08■■■□□ 2.25
DDR1-279ENST00000515529 C9orf50Q5SZB4 431 aa29.08■■■□□ 2.25
DDR1-279ENST00000515529 OTUD6AQ7L8S5 288 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms