RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 DTX3Q8N9I9 347 aa5.05□□□□□ -1.6
CAST-242ENST00000515063 CLEC4DQ8WXI8 215 aa5.05□□□□□ -1.6
CAST-242ENST00000515063 DDX1Q92499 740 aaKnown RBP5.05□□□□□ -1.6
CAST-242ENST00000515063 DNAJC7Q99615 494 aa5.05□□□□□ -1.6
CAST-242ENST00000515063 SYT3Q9BQG1 590 aa5.05□□□□□ -1.6
CAST-242ENST00000515063 KRTAP4-7Q9BYR0 210 aa5.05□□□□□ -1.6
CAST-242ENST00000515063 OSBPL2Q9H1P3 480 aa5.05□□□□□ -1.6
CAST-242ENST00000515063 RRP7BPQ9NSQ0 103 aa5.05□□□□□ -1.6
CAST-242ENST00000515063 SRPK3Q9UPE1 567 aa5.05□□□□□ -1.6
CAST-242ENST00000515063 PCDHA8Q9Y5H6 950 aa5.05□□□□□ -1.6
CAST-242ENST00000515063 ABCC10Q5T3U5 1492 aa5.05□□□□□ -1.6
CAST-242ENST00000515063 ANKRD30AQ9BXX3 1397 aa5.04□□□□□ -1.6
CAST-242ENST00000515063 ADAMTS20P59510 1910 aa5.04□□□□□ -1.6
CAST-242ENST00000515063 FAM221BA6H8Z2 402 aa5.04□□□□□ -1.6
CAST-242ENST00000515063 SMAD2Q15796 467 aaKnown RBP5.04□□□□□ -1.6
CAST-242ENST00000515063 SPATS1Q496A3 300 aa5.04□□□□□ -1.6
CAST-242ENST00000515063 C2orf27AQ580R0 203 aa5.04□□□□□ -1.6
CAST-242ENST00000515063 FOXB2Q5VYV0 432 aa5.04□□□□□ -1.6
CAST-242ENST00000515063 CD276Q5ZPR3 534 aa5.04□□□□□ -1.6
CAST-242ENST00000515063 ARHGAP36Q6ZRI8 547 aa5.04□□□□□ -1.6
CAST-242ENST00000515063 FERMT3Q86UX7 667 aa5.04□□□□□ -1.6
CAST-242ENST00000515063 KLHL36Q8N4N3 616 aa5.04□□□□□ -1.6
CAST-242ENST00000515063 JMYQ8N9B5 988 aa5.04□□□□□ -1.6
CAST-242ENST00000515063 PCDH19Q8TAB3 1148 aa5.04□□□□□ -1.6
CAST-242ENST00000515063 KISS1RQ969F8 398 aaPredicted RBP5.04□□□□□ -1.6
CAST-242ENST00000515063 MAGEB10Q96LZ2 347 aaPredicted RBP5.04□□□□□ -1.6
CAST-242ENST00000515063 MRPL4Q9BYD3 311 aaKnown RBP5.04□□□□□ -1.6
CAST-242ENST00000515063 ARHGAP20Q9P2F6 1191 aa5.04□□□□□ -1.6
CAST-242ENST00000515063 NDOR1Q9UHB4 597 aa5.04□□□□□ -1.6
CAST-242ENST00000515063 SFMBT1Q9UHJ3 866 aa5.04□□□□□ -1.6
CAST-242ENST00000515063 ATP23Q9Y6H3 246 aa5.04□□□□□ -1.6
CAST-242ENST00000515063 TEX14Q8IWB6 1497 aa5.04□□□□□ -1.6
CAST-242ENST00000515063 SHROOM2Q13796 1616 aa5.04□□□□□ -1.6
CAST-242ENST00000515063 ARID4BQ4LE39 1312 aaPredicted RBP5.03□□□□□ -1.6
CAST-242ENST00000515063 ATP10BO94823 1461 aa5.03□□□□□ -1.6
CAST-242ENST00000515063 PZPP20742 1482 aa5.03□□□□□ -1.6
CAST-242ENST00000515063 PLB1Q6P1J6 1458 aa5.03□□□□□ -1.6
CAST-242ENST00000515063 PLEKHD1A6NEE1 506 aa5.03□□□□□ -1.6
CAST-242ENST00000515063 PRICKLE3O43900 615 aaPredicted RBP5.03□□□□□ -1.6
CAST-242ENST00000515063 CRTAMO95727 393 aa5.03□□□□□ -1.6
CAST-242ENST00000515063 PLATP00750 562 aa5.03□□□□□ -1.6
CAST-242ENST00000515063 PTPN1P18031 435 aaKnown RBP5.03□□□□□ -1.6
CAST-242ENST00000515063 SKIDA1Q1XH10 827 aa5.03□□□□□ -1.6
CAST-242ENST00000515063 SKOR2Q2VWA4 1001 aaPredicted RBP5.03□□□□□ -1.6
CAST-242ENST00000515063 TRIM61Q5EBN2 209 aa5.03□□□□□ -1.6
CAST-242ENST00000515063 BTBD8Q5XKL5 378 aa5.03□□□□□ -1.6
CAST-242ENST00000515063 DPP8Q6V1X1 898 aaPredicted RBP5.03□□□□□ -1.6
CAST-242ENST00000515063 PRRT2Q7Z6L0 340 aaPredicted RBP5.03□□□□□ -1.6
CAST-242ENST00000515063 IGDCC4Q8TDY8 1250 aa5.03□□□□□ -1.6
CAST-242ENST00000515063 CD244Q9BZW8 370 aa5.03□□□□□ -1.6
CAST-242ENST00000515063 ARHGAP28Q9P2N2 729 aa5.03□□□□□ -1.6
CAST-242ENST00000515063 CFDP1Q9UEE9 299 aaPredicted RBP5.03□□□□□ -1.6
CAST-242ENST00000515063 UHRF1BP1Q6BDS2 1440 aa5.03□□□□□ -1.6
CAST-242ENST00000515063 PRG4Q92954 1404 aaPredicted RBP5.03□□□□□ -1.6
CAST-242ENST00000515063 CNTLNQ9NXG0 1405 aa5.03□□□□□ -1.6
CAST-242ENST00000515063 KIAA1107Q9UPP5 1409 aa5.03□□□□□ -1.6
CAST-242ENST00000515063 MAST1Q9Y2H9 1570 aa5.03□□□□□ -1.6
CAST-242ENST00000515063 ARHGEF12Q9NZN5 1544 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 ZNF536O15090 1300 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 MBD5Q9P267 1494 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 PREX2Q70Z35 1606 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 CCDC66A2RUB6 948 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 ZNF839A8K0R7 811 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 NPTXRO95502 500 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 LTFP02788 710 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 CKMP06732 381 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 SRGAP2CP0DJJ0 459 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 PDE6AP16499 860 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 BUD31P41223 144 aaPredicted RBP5.02□□□□□ -1.61
CAST-242ENST00000515063 MLLT6P55198 1093 aaPredicted RBP5.02□□□□□ -1.61
CAST-242ENST00000515063 PFKPQ01813 784 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 ZNF827Q17R98 1081 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 PROSER1Q86XN7 944 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 RBM12BQ8IXT5 1001 aaKnown RBP5.02□□□□□ -1.61
CAST-242ENST00000515063 GSTCDQ8NEC7 633 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 MRFAP1L1Q96HT8 127 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 DNAJC2Q99543 621 aaKnown RBP5.02□□□□□ -1.61
CAST-242ENST00000515063 SLC52A2Q9HAB3 445 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 RIC8BQ9NVN3 520 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 ZFP69BQ9UJL9 534 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 INVSQ9Y283 1065 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 TELO2Q9Y4R8 837 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 PCDHA9Q9Y5H5 950 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 DUSP10Q9Y6W6 482 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 PTPRGP23470 1445 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 SPATA31E1Q6ZUB1 1445 aa5.02□□□□□ -1.61
CAST-242ENST00000515063 ANKRD50Q9ULJ7 1429 aa5.01□□□□□ -1.61
CAST-242ENST00000515063 LAMTOR5O43504 91 aa5.01□□□□□ -1.61
CAST-242ENST00000515063 HSPA5P11021 654 aaKnown RBP5.01□□□□□ -1.61
CAST-242ENST00000515063 PYGMP11217 842 aa5.01□□□□□ -1.61
CAST-242ENST00000515063 KRT15P19012 456 aa5.01□□□□□ -1.61
CAST-242ENST00000515063 DNM2P50570 870 aa5.01□□□□□ -1.61
CAST-242ENST00000515063 LACTBP83111 547 aaPredicted RBP5.01□□□□□ -1.61
CAST-242ENST00000515063 DBPQ10586 325 aaPredicted RBP5.01□□□□□ -1.61
CAST-242ENST00000515063 NFATC3Q12968 1075 aa5.01□□□□□ -1.61
CAST-242ENST00000515063 PKN3Q6P5Z2 889 aa5.01□□□□□ -1.61
CAST-242ENST00000515063 GLB1LQ6UWU2 654 aa5.01□□□□□ -1.61
CAST-242ENST00000515063 REXO1L1PQ8IX06 675 aa5.01□□□□□ -1.61
CAST-242ENST00000515063 IFNL2Q8IZJ0 200 aa5.01□□□□□ -1.61
CAST-242ENST00000515063 ZCCHC14Q8WYQ9 949 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms