RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 CYP3A4P08684 503 aa15.14■□□□□ 0.01
PFDN1-206ENST00000514611 LINC00271P0C7V0 271 aa15.14■□□□□ 0.01
PFDN1-206ENST00000514611 CCT2P78371 535 aaKnown RBP15.14■□□□□ 0.01
PFDN1-206ENST00000514611 GPM6BQ13491 265 aa15.14■□□□□ 0.01
PFDN1-206ENST00000514611 MTHFD1LQ6UB35 978 aa15.14■□□□□ 0.01
PFDN1-206ENST00000514611 CCDC12Q8WUD4 166 aaPredicted RBP15.14■□□□□ 0.01
PFDN1-206ENST00000514611 MRPL38Q96DV4 380 aaKnown RBP15.14■□□□□ 0.01
PFDN1-206ENST00000514611 IL17RAQ96F46 866 aa15.14■□□□□ 0.01
PFDN1-206ENST00000514611 SAMD11Q96NU1 681 aa15.14■□□□□ 0.01
PFDN1-206ENST00000514611 SLC26A6Q9BXS9 759 aa15.14■□□□□ 0.01
PFDN1-206ENST00000514611 UBE2ZQ9H832 354 aaPredicted RBP15.14■□□□□ 0.01
PFDN1-206ENST00000514611 C6orf50Q9HD87 102 aa15.14■□□□□ 0.01
PFDN1-206ENST00000514611 VPS54Q9P1Q0 977 aa15.14■□□□□ 0.01
PFDN1-206ENST00000514611 PCDHA2Q9Y5H9 948 aa15.14■□□□□ 0.01
PFDN1-206ENST00000514611 TCF20Q9UGU0 1960 aaKnown RBP15.13■□□□□ 0.01
PFDN1-206ENST00000514611 SMIM35A0A1B0GVV1 85 aa15.13■□□□□ 0.01
PFDN1-206ENST00000514611 H3BNC9 293 aa15.13■□□□□ 0.01
PFDN1-206ENST00000514611 M0QZ92 97 aa15.13■□□□□ 0.01
PFDN1-206ENST00000514611 PDIA3P30101 505 aaKnown RBP15.13■□□□□ 0.01
PFDN1-206ENST00000514611 CTNNB1P35222 781 aa15.13■□□□□ 0.01
PFDN1-206ENST00000514611 SETQ01105 290 aaPredicted RBP15.13■□□□□ 0.01
PFDN1-206ENST00000514611 TOB2Q14106 344 aaPredicted RBP15.13■□□□□ 0.01
PFDN1-206ENST00000514611 IER5Q5VY09 327 aa15.13■□□□□ 0.01
PFDN1-206ENST00000514611 PDXDC2PQ6P474 469 aa15.13■□□□□ 0.01
PFDN1-206ENST00000514611 FIBCD1Q8N539 461 aa15.13■□□□□ 0.01
PFDN1-206ENST00000514611 ATP8B4Q8TF62 1192 aa15.13■□□□□ 0.01
PFDN1-206ENST00000514611 ZNF577Q9BSK1 485 aa15.13■□□□□ 0.01
PFDN1-206ENST00000514611 RNF26Q9BY78 433 aaPredicted RBP15.13■□□□□ 0.01
PFDN1-206ENST00000514611 ZNF302Q9NR11 478 aa15.13■□□□□ 0.01
PFDN1-206ENST00000514611 IGSF9BQ9UPX0 1349 aa15.13■□□□□ 0.01
PFDN1-206ENST00000514611 HBP1O60381 514 aa15.12■□□□□ 0.01
PFDN1-206ENST00000514611 CSPG5O95196 566 aa15.12■□□□□ 0.01
PFDN1-206ENST00000514611 RPLP2P05387 115 aaKnown RBP15.12■□□□□ 0.01
PFDN1-206ENST00000514611 ATP4AP20648 1035 aa15.12■□□□□ 0.01
PFDN1-206ENST00000514611 KCNA5P22460 613 aa15.12■□□□□ 0.01
PFDN1-206ENST00000514611 PSMA5P28066 241 aa15.12■□□□□ 0.01
PFDN1-206ENST00000514611 GNA11P29992 359 aa15.12■□□□□ 0.01
PFDN1-206ENST00000514611 SLC26A2P50443 739 aa15.12■□□□□ 0.01
PFDN1-206ENST00000514611 AKAP17AQ02040 695 aaKnown RBP15.12■□□□□ 0.01
PFDN1-206ENST00000514611 PAK2Q13177 524 aa15.12■□□□□ 0.01
PFDN1-206ENST00000514611 PTPROQ16827 1216 aa15.12■□□□□ 0.01
PFDN1-206ENST00000514611 TMEM266Q2M3C6 531 aa15.12■□□□□ 0.01
PFDN1-206ENST00000514611 PRR16Q569H4 304 aa15.12■□□□□ 0.01
PFDN1-206ENST00000514611 FAM160B1Q5W0V3 765 aa15.12■□□□□ 0.01
PFDN1-206ENST00000514611 SWSAP1Q6NVH7 229 aa15.12■□□□□ 0.01
PFDN1-206ENST00000514611 MIS18BP1Q6P0N0 1132 aa15.12■□□□□ 0.01
PFDN1-206ENST00000514611 TRMT1LQ7Z2T5 733 aaKnown RBP15.12■□□□□ 0.01
PFDN1-206ENST00000514611 TNPO1Q92973 898 aaKnown RBP15.12■□□□□ 0.01
PFDN1-206ENST00000514611 LENG9Q96B70 501 aa15.12■□□□□ 0.01
PFDN1-206ENST00000514611 ZNF689Q96CS4 500 aaPredicted RBP15.12■□□□□ 0.01
PFDN1-206ENST00000514611 PPP1R16BQ96T49 567 aa15.12■□□□□ 0.01
PFDN1-206ENST00000514611 CELF4Q9BZC1 486 aaKnown RBP15.12■□□□□ 0.01
PFDN1-206ENST00000514611 PADI3Q9ULW8 664 aa15.12■□□□□ 0.01
PFDN1-206ENST00000514611 GINS2Q9Y248 185 aa15.12■□□□□ 0.01
PFDN1-206ENST00000514611 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.11■□□□□ 0.01
PFDN1-206ENST00000514611 ZBTB42B2RXF5 422 aa15.11■□□□□ 0.01
PFDN1-206ENST00000514611 EDIL3O43854 480 aa15.11■□□□□ 0.01
PFDN1-206ENST00000514611 IFNAR1P17181 557 aa15.11■□□□□ 0.01
PFDN1-206ENST00000514611 IBSPP21815 317 aaPredicted RBP15.11■□□□□ 0.01
PFDN1-206ENST00000514611 KLRC1P26715 233 aa15.11■□□□□ 0.01
PFDN1-206ENST00000514611 EVCP57679 992 aa15.11■□□□□ 0.01
PFDN1-206ENST00000514611 BTG3Q14201 252 aaPredicted RBP15.11■□□□□ 0.01
PFDN1-206ENST00000514611 TIGD5Q53EQ6 642 aa15.11■□□□□ 0.01
PFDN1-206ENST00000514611 TCEAL5Q5H9L2 206 aa15.11■□□□□ 0.01
PFDN1-206ENST00000514611 RUFY3Q7L099 469 aa15.11■□□□□ 0.01
PFDN1-206ENST00000514611 RTN4RL1Q86UN2 441 aaPredicted RBP15.11■□□□□ 0.01
PFDN1-206ENST00000514611 BANK1Q8NDB2 785 aa15.11■□□□□ 0.01
PFDN1-206ENST00000514611 CCDC148Q8NFR7 591 aa15.11■□□□□ 0.01
PFDN1-206ENST00000514611 TMEM40Q8WWA1 233 aa15.11■□□□□ 0.01
PFDN1-206ENST00000514611 LARP6Q9BRS8 491 aaKnown RBP15.11■□□□□ 0.01
PFDN1-206ENST00000514611 TMX1Q9H3N1 280 aa15.11■□□□□ 0.01
PFDN1-206ENST00000514611 SQORQ9Y6N5 450 aa15.11■□□□□ 0.01
PFDN1-206ENST00000514611 KDM3AQ9Y4C1 1321 aa15.11■□□□□ 0.01
PFDN1-206ENST00000514611 COL1A2P08123 1366 aa15.11■□□□□ 0.01
PFDN1-206ENST00000514611 C5orf67F2Z3F1 127 aa15.1■□□□□ 0.01
PFDN1-206ENST00000514611 DGKIO75912 1065 aa15.1■□□□□ 0.01
PFDN1-206ENST00000514611 CIITAP33076 1130 aa15.1■□□□□ 0.01
PFDN1-206ENST00000514611 GATMP50440 423 aa15.1■□□□□ 0.01
PFDN1-206ENST00000514611 KRT76Q01546 638 aa15.1■□□□□ 0.01
PFDN1-206ENST00000514611 PAN2Q504Q3 1202 aaKnown RBP15.1■□□□□ 0.01
PFDN1-206ENST00000514611 MCTP2Q6DN12 878 aa15.1■□□□□ 0.01
PFDN1-206ENST00000514611 ZNF746Q6NUN9 644 aaPredicted RBP15.1■□□□□ 0.01
PFDN1-206ENST00000514611 CKAP2LQ8IYA6 745 aa15.1■□□□□ 0.01
PFDN1-206ENST00000514611 CLP1Q92989 425 aaKnown RBP15.1■□□□□ 0.01
PFDN1-206ENST00000514611 FTHL17Q9BXU8 183 aa15.1■□□□□ 0.01
PFDN1-206ENST00000514611 UPF3BQ9BZI7 483 aaKnown RBP15.1■□□□□ 0.01
PFDN1-206ENST00000514611 CDHR5Q9HBB8 845 aa15.1■□□□□ 0.01
PFDN1-206ENST00000514611 ZSWIM6Q9HCJ5 1215 aa15.1■□□□□ 0.01
PFDN1-206ENST00000514611 TBC1D22BQ9NU19 505 aa15.1■□□□□ 0.01
PFDN1-206ENST00000514611 MRPL42Q9Y6G3 142 aaKnown RBP15.1■□□□□ 0.01
PFDN1-206ENST00000514611 KAT6AQ92794 2004 aa15.1■□□□□ 0.01
PFDN1-206ENST00000514611 RALGAPA2Q2PPJ7 1873 aa15.1■□□□□ 0.01
PFDN1-206ENST00000514611 NLRC5Q86WI3 1866 aa15.1■□□□□ 0.01
PFDN1-206ENST00000514611 GRM6O15303 877 aa15.09■□□□□ 0.01
PFDN1-206ENST00000514611 MGEA5O60502 916 aa15.09■□□□□ 0.01
PFDN1-206ENST00000514611 C22orf31O95567 290 aa15.09■□□□□ 0.01
PFDN1-206ENST00000514611 BMPR1AP36894 532 aa15.09■□□□□ 0.01
PFDN1-206ENST00000514611 NFX1Q12986 1120 aaKnown RBP15.09■□□□□ 0.01
PFDN1-206ENST00000514611 LEXMQ3ZCV2 418 aa15.09■□□□□ 0.01
PFDN1-206ENST00000514611 NPAS4Q8IUM7 802 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms