RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 PHC1P78364 1004 aa7.11□□□□□ -1.27
HMGCS1-207ENST00000514610 STK32CQ86UX6 486 aa7.11□□□□□ -1.27
HMGCS1-207ENST00000514610 ZC3H18Q86VM9 953 aaKnown RBP7.11□□□□□ -1.27
HMGCS1-207ENST00000514610 RTF1Q92541 710 aaKnown RBP7.11□□□□□ -1.27
HMGCS1-207ENST00000514610 ERCC4Q92889 916 aaPredicted RBP7.11□□□□□ -1.27
HMGCS1-207ENST00000514610 FMNL2Q96PY5 1086 aa7.11□□□□□ -1.27
HMGCS1-207ENST00000514610 GORASP1Q9BQQ3 440 aa7.11□□□□□ -1.27
HMGCS1-207ENST00000514610 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 PRAMEF22A3QJZ6 481 aa7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 ALG1L2C9J202 215 aa7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 GOLGA6L22H0YM25 854 aa7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 ETV2O00321 342 aaPredicted RBP7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 CYP2C8P10632 490 aa7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 PFKLP17858 780 aa7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 PFKPQ01813 784 aa7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 MTMR1Q13613 665 aa7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 RTP5Q14D33 572 aa7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 EPHA7Q15375 998 aa7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 PHF19Q5T6S3 580 aa7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 GPR158Q5T848 1215 aa7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 PRAMEF18Q5VWM3 479 aa7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 IQSEC1Q6DN90 963 aa7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 CILP2Q8IUL8 1156 aa7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 PASD1Q8IV76 773 aa7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 TMEFF1Q8IYR6 380 aa7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 CNTD1Q8N815 330 aa7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 DTX3Q8N9I9 347 aa7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 ZNF610Q8N9Z0 462 aa7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 CCDC8Q9H0W5 538 aaPredicted RBP7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 SEMA4AQ9H3S1 761 aa7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 NGRNQ9NPE2 291 aaKnown RBP7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 UCKL1Q9NWZ5 548 aa7.1□□□□□ -1.27
HMGCS1-207ENST00000514610 ULK1O75385 1050 aa7.09□□□□□ -1.27
HMGCS1-207ENST00000514610 KRT1P04264 644 aa7.09□□□□□ -1.27
HMGCS1-207ENST00000514610 PDGFRBP09619 1106 aa7.09□□□□□ -1.27
HMGCS1-207ENST00000514610 PTGS1P23219 599 aa7.09□□□□□ -1.27
HMGCS1-207ENST00000514610 LSP1P33241 339 aa7.09□□□□□ -1.27
HMGCS1-207ENST00000514610 ITGA1P56199 1179 aa7.09□□□□□ -1.27
HMGCS1-207ENST00000514610 SESN3P58005 492 aa7.09□□□□□ -1.27
HMGCS1-207ENST00000514610 FOXO4P98177 505 aa7.09□□□□□ -1.27
HMGCS1-207ENST00000514610 ADAM9Q13443 819 aa7.09□□□□□ -1.27
HMGCS1-207ENST00000514610 LRRC32Q14392 662 aa7.09□□□□□ -1.27
HMGCS1-207ENST00000514610 VASNQ6EMK4 673 aa7.09□□□□□ -1.27
HMGCS1-207ENST00000514610 FERMT3Q86UX7 667 aa7.09□□□□□ -1.27
HMGCS1-207ENST00000514610 HIPK4Q8NE63 616 aa7.09□□□□□ -1.27
HMGCS1-207ENST00000514610 KCNN1Q92952 543 aa7.09□□□□□ -1.27
HMGCS1-207ENST00000514610 SCYL1Q96KG9 808 aa7.09□□□□□ -1.27
HMGCS1-207ENST00000514610 AMNQ9BXJ7 453 aa7.09□□□□□ -1.27
HMGCS1-207ENST00000514610 TOPORSQ9NS56 1045 aaPredicted RBP7.09□□□□□ -1.27
HMGCS1-207ENST00000514610 TYW1Q9NV66 732 aaKnown RBP7.09□□□□□ -1.27
HMGCS1-207ENST00000514610 ARHGAP28Q9P2N2 729 aa7.09□□□□□ -1.27
HMGCS1-207ENST00000514610 ASB1Q9Y576 335 aa7.09□□□□□ -1.27
HMGCS1-207ENST00000514610 NFIBO00712 420 aa7.08□□□□□ -1.28
HMGCS1-207ENST00000514610 RAB11FIP3O75154 756 aa7.08□□□□□ -1.28
HMGCS1-207ENST00000514610 PLA2G1BP04054 148 aaKnown RBP7.08□□□□□ -1.28
HMGCS1-207ENST00000514610 ENO2P09104 434 aaPredicted RBP7.08□□□□□ -1.28
HMGCS1-207ENST00000514610 TXKP42681 527 aa7.08□□□□□ -1.28
HMGCS1-207ENST00000514610 ERVK-21P61565 698 aa7.08□□□□□ -1.28
HMGCS1-207ENST00000514610 SKIDA1Q1XH10 827 aa7.08□□□□□ -1.28
HMGCS1-207ENST00000514610 PLEKHG6Q3KR16 790 aa7.08□□□□□ -1.28
HMGCS1-207ENST00000514610 LRSAM1Q6UWE0 723 aa7.08□□□□□ -1.28
HMGCS1-207ENST00000514610 SYDE1Q6ZW31 735 aaPredicted RBP7.08□□□□□ -1.28
HMGCS1-207ENST00000514610 CMIPQ8IY22 773 aa7.08□□□□□ -1.28
HMGCS1-207ENST00000514610 ZNF496Q96IT1 587 aaPredicted RBP7.08□□□□□ -1.28
HMGCS1-207ENST00000514610 ZSWIM3Q96MP5 696 aa7.08□□□□□ -1.28
HMGCS1-207ENST00000514610 ASPSCR1Q9BZE9 553 aa7.08□□□□□ -1.28
HMGCS1-207ENST00000514610 ZDHHC5Q9C0B5 715 aa7.08□□□□□ -1.28
HMGCS1-207ENST00000514610 PUS7LQ9H0K6 701 aaKnown RBP7.08□□□□□ -1.28
HMGCS1-207ENST00000514610 EPB41L4AQ9HCS5 686 aaPredicted RBP7.08□□□□□ -1.28
HMGCS1-207ENST00000514610 FAN1Q9Y2M0 1017 aa7.08□□□□□ -1.28
HMGCS1-207ENST00000514610 CD40P25942 277 aa7.07□□□□□ -1.28
HMGCS1-207ENST00000514610 SSPNQ14714 243 aa7.07□□□□□ -1.28
HMGCS1-207ENST00000514610 PDCD1Q15116 288 aa7.07□□□□□ -1.28
HMGCS1-207ENST00000514610 RASSF3Q86WH2 238 aa7.07□□□□□ -1.28
HMGCS1-207ENST00000514610 ZZZ3Q8IYH5 903 aa7.07□□□□□ -1.28
HMGCS1-207ENST00000514610 IGDCC4Q8TDY8 1250 aa7.07□□□□□ -1.28
HMGCS1-207ENST00000514610 MTMR8Q96EF0 704 aa7.07□□□□□ -1.28
HMGCS1-207ENST00000514610 C11orf84Q9BUA3 381 aaPredicted RBP7.07□□□□□ -1.28
HMGCS1-207ENST00000514610 INCENPQ9NQS7 918 aa7.07□□□□□ -1.28
HMGCS1-207ENST00000514610 DLL4Q9NR61 685 aa7.07□□□□□ -1.28
HMGCS1-207ENST00000514610 TRHDEQ9UKU6 1024 aa7.07□□□□□ -1.28
HMGCS1-207ENST00000514610 K7ESF4 209 aa7.06□□□□□ -1.28
HMGCS1-207ENST00000514610 KDM1AO60341 852 aa7.06□□□□□ -1.28
HMGCS1-207ENST00000514610 IL18BPO95998 194 aa7.06□□□□□ -1.28
HMGCS1-207ENST00000514610 PRLP01236 227 aa7.06□□□□□ -1.28
HMGCS1-207ENST00000514610 MED14OSP0DP75 135 aa7.06□□□□□ -1.28
HMGCS1-207ENST00000514610 GLDCP23378 1020 aa7.06□□□□□ -1.28
HMGCS1-207ENST00000514610 GLRBP48167 497 aa7.06□□□□□ -1.28
HMGCS1-207ENST00000514610 EXOSC10Q01780 885 aaKnown RBP7.06□□□□□ -1.28
HMGCS1-207ENST00000514610 ALDH6A1Q02252 535 aaKnown RBP7.06□□□□□ -1.28
HMGCS1-207ENST00000514610 MYBPC3Q14896 1274 aa7.06□□□□□ -1.28
HMGCS1-207ENST00000514610 CBARPQ8N350 705 aaPredicted RBP7.06□□□□□ -1.28
HMGCS1-207ENST00000514610 LINC00482Q8N8I6 264 aa7.06□□□□□ -1.28
HMGCS1-207ENST00000514610 SIGLEC10Q96LC7 697 aa7.06□□□□□ -1.28
HMGCS1-207ENST00000514610 TMEM209Q96SK2 561 aa7.06□□□□□ -1.28
HMGCS1-207ENST00000514610 POFUT1Q9H488 388 aa7.06□□□□□ -1.28
HMGCS1-207ENST00000514610 C14orf119Q9NWQ9 140 aa7.06□□□□□ -1.28
HMGCS1-207ENST00000514610 MSRAQ9UJ68 235 aa7.06□□□□□ -1.28
HMGCS1-207ENST00000514610 UBA6A0AVT1 1052 aaPredicted RBP7.05□□□□□ -1.28
HMGCS1-207ENST00000514610 ELL2O00472 640 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms